RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 CEP83Q9Y592 693 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 ANGPTL3Q9Y5C1 460 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 PCDHGB5Q9Y5G0 923 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 SNX13Q9Y5W8 968 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 SNX8Q9Y5X2 465 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 A0A0B4J203 849 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 A0A1W2PPL8 197 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 POM121BA6NF01 834 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 A8MVJ9 347 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 APOL1O14791 398 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 CTIFO43310 598 aaKnown RBP2.36□□□□□ -2.03
PTPN12-212ENST00000494248 SPRY2O43597 315 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 TLX3O43711 291 aaPredicted RBP2.36□□□□□ -2.03
PTPN12-212ENST00000494248 NEMFO60524 1076 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 KLHL41O60662 606 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 PALMO75781 387 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 SNX4O95219 450 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 IL18RAPO95256 599 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 SCGB1D1O95968 90 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 ALDH2P05091 517 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 QDPRP09417 244 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 CLTBP09497 229 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 NR2F1P10589 423 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 FGF3P11487 239 aaPredicted RBP2.36□□□□□ -2.03
PTPN12-212ENST00000494248 TNNT1P13805 278 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 HLA-DPA1P20036 260 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 BTF3P20290 206 aaKnown RBP2.36□□□□□ -2.03
PTPN12-212ENST00000494248 TCEA1P23193 301 aaKnown RBP2.36□□□□□ -2.03
PTPN12-212ENST00000494248 ARRB2P32121 409 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 KRT2P35908 639 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 SERPINF1P36955 418 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 MCM2P49736 904 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 CASP6P55212 293 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 NLRP5P59047 1200 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 POLR2FP61218 127 aaKnown RBP2.36□□□□□ -2.03
PTPN12-212ENST00000494248 IFI35P80217 286 aaPredicted RBP2.36□□□□□ -2.03
PTPN12-212ENST00000494248 RBP5P82980 135 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 PPARDQ03181 441 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 ZBTB16Q05516 673 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 DDR1Q08345 913 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 SLC13A2Q13183 592 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 SLC14A1Q13336 389 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 PMS2P11Q13670 270 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 ACVR2BQ13705 512 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 PTK2BQ14289 1009 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 NFATC4Q14934 902 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 PPA1Q15181 289 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 OASLQ15646 514 aaKnown RBP2.36□□□□□ -2.03
PTPN12-212ENST00000494248 MPEG1Q2M385 716 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 ADCK5Q3MIX3 580 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 OTUD3Q5T2D3 398 aaPredicted RBP2.36□□□□□ -2.03
PTPN12-212ENST00000494248 RAB12Q6IQ22 244 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 LIN54Q6MZP7 749 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 JMJD6Q6NYC1 403 aaPredicted RBP2.36□□□□□ -2.03
PTPN12-212ENST00000494248 GGT6Q6P531 493 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 FIP1L1Q6UN15 594 aaKnown RBP2.36□□□□□ -2.03
PTPN12-212ENST00000494248 IL27RAQ6UWB1 636 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 NUP54Q7Z3B4 507 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 ZER1Q7Z7L7 766 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 TMEM110Q86TL2 294 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 COL23A1Q86Y22 540 aaPredicted RBP2.36□□□□□ -2.03
PTPN12-212ENST00000494248 DZIP1Q86YF9 867 aaKnown RBP2.36□□□□□ -2.03
PTPN12-212ENST00000494248 CPOQ8IVL8 374 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 CCDC170Q8IYT3 715 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 NGEFQ8N5V2 710 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 IQCF1Q8N6M8 205 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.36□□□□□ -2.03
PTPN12-212ENST00000494248 ATG16L2Q8NAA4 619 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 MOSPD2Q8NHP6 518 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 CEP70Q8NHQ1 597 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 GDAP1Q8TB36 358 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 DNAJB14Q8TBM8 379 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 CREB3L4Q8TEY5 395 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 NUDCD2Q8WVJ2 157 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 CDCA5Q96FF9 252 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 FEM1CQ96JP0 617 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 ZBTB45Q96K62 511 aaPredicted RBP2.36□□□□□ -2.03
PTPN12-212ENST00000494248 NEK1Q96PY6 1258 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 HGH1Q9BTY7 390 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 GATA5Q9BWX5 397 aaPredicted RBP2.36□□□□□ -2.03
PTPN12-212ENST00000494248 STK33Q9BYT3 514 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 AGXT2Q9BYV1 514 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 ZNF518BQ9C0D4 1074 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 NUAK2Q9H093 628 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 NT5C3AQ9H0P0 336 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 NCOR1P1Q9H4R4 102 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 YY1AP1Q9H869 796 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 PNPLA8Q9NP80 782 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 CD93Q9NPY3 652 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 PAPOLBQ9NRJ5 636 aaKnown RBP2.36□□□□□ -2.03
PTPN12-212ENST00000494248 HIF1ANQ9NWT6 349 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 ADPRHL2Q9NX46 363 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 LRFN1Q9P244 771 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 KIF17Q9P2E2 1029 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 EXTL2Q9UBQ6 330 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 ZMAT5Q9UDW3 170 aaKnown RBP2.36□□□□□ -2.03
PTPN12-212ENST00000494248 SRP68Q9UHB9 627 aaKnown RBP2.36□□□□□ -2.03
PTPN12-212ENST00000494248 CHORDC1Q9UHD1 332 aaPredicted RBP2.36□□□□□ -2.03
PTPN12-212ENST00000494248 ITGB1BP2Q9UKP3 347 aa2.36□□□□□ -2.03
PTPN12-212ENST00000494248 CFAP45Q9UL16 551 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms