RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 BEND5Q7L4P6 421 aa3.57□□□□□ -1.84
PTCD3-218ENST00000493430 COPS6Q7L5N1 327 aa3.57□□□□□ -1.84
PTCD3-218ENST00000493430 FAM9BQ8IZU0 186 aa3.57□□□□□ -1.84
PTCD3-218ENST00000493430 SRFBP1Q8NEF9 429 aaKnown RBP3.57□□□□□ -1.84
PTCD3-218ENST00000493430 ELP5Q8TE02 316 aa3.57□□□□□ -1.84
PTCD3-218ENST00000493430 INPP5DQ92835 1189 aa3.57□□□□□ -1.84
PTCD3-218ENST00000493430 PPP1R10Q96QC0 940 aaKnown RBP3.57□□□□□ -1.84
PTCD3-218ENST00000493430 ABHD14AQ9BUJ0 271 aa3.57□□□□□ -1.84
PTCD3-218ENST00000493430 MXD3Q9BW11 206 aa3.57□□□□□ -1.84
PTCD3-218ENST00000493430 CD93Q9NPY3 652 aa3.57□□□□□ -1.84
PTCD3-218ENST00000493430 ZNFX1Q9P2E3 1918 aaKnown RBP3.57□□□□□ -1.84
PTCD3-218ENST00000493430 ZMYND8Q9ULU4 1186 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-218ENST00000493430 TNNQ9UQP3 1299 aa3.57□□□□□ -1.84
PTCD3-218ENST00000493430 MYH4Q9Y623 1939 aa3.57□□□□□ -1.84
PTCD3-218ENST00000493430 RBBP6Q7Z6E9 1792 aaKnown RBP3.56□□□□□ -1.84
PTCD3-218ENST00000493430 FANCIQ9NVI1 1328 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 GAGE12JA6NER3 117 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 OR2W5A6NFC9 320 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 YDJCA8MPS7 323 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 TSPAN6O43657 245 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 NFATC1O95644 943 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 VIPP01282 170 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 KLKB1P03952 638 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 FGFR2P21802 821 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 RGS19P49795 217 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 ROR2Q01974 943 aaKnown RBP3.56□□□□□ -1.84
PTCD3-218ENST00000493430 C9orf50Q5SZB4 431 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 ASPHD1Q5U4P2 390 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 KLHDC7AQ5VTJ3 777 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 RAP1GAP2Q684P5 730 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 NADSYN1Q6IA69 706 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 HMBOX1Q6NT76 420 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 PARM1Q6UWI2 310 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 KIF6Q6ZMV9 814 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 CYB5R4Q7L1T6 521 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 ZNF34Q8IZ26 560 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 FAM177A1Q8N128 213 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-218ENST00000493430 OR52N4Q8NGI2 321 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 JDP2Q8WYK2 163 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 DNASE2BQ8WZ79 361 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 SNX27Q96L92 541 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 ZNF347Q96SE7 839 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 MYD88Q99836 296 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 PCDHAC1Q9H158 963 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 ISCUQ9H1K1 167 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 TAOK3Q9H2K8 898 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 DBNDD1Q9H9R9 158 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 SPAG4Q9NPE6 437 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 FBXO28Q9NVF7 368 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 MDFICQ9P1T7 246 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 MYO6Q9UM54 1294 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 PCDHAC2Q9Y5I4 1007 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 INSL5Q9Y5Q6 135 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 SMCHD1A6NHR9 2005 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 PLXNA1Q9UIW2 1896 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 PLXNB2O15031 1838 aa3.56□□□□□ -1.84
PTCD3-218ENST00000493430 RTL9Q8NET4 1388 aa3.55□□□□□ -1.84
PTCD3-218ENST00000493430 M0QZQ0 153 aa3.55□□□□□ -1.84
PTCD3-218ENST00000493430 CHL1O00533 1208 aa3.55□□□□□ -1.84
PTCD3-218ENST00000493430 PPP6R2O75170 966 aa3.55□□□□□ -1.84
PTCD3-218ENST00000493430 PAPSS2O95340 614 aaPredicted RBP3.55□□□□□ -1.84
PTCD3-218ENST00000493430 CPA1P15085 419 aa3.55□□□□□ -1.84
PTCD3-218ENST00000493430 TGM2P21980 687 aa3.55□□□□□ -1.84
PTCD3-218ENST00000493430 EPS15P42566 896 aa3.55□□□□□ -1.84
PTCD3-218ENST00000493430 RRP1P56182 461 aaKnown RBP3.55□□□□□ -1.84
PTCD3-218ENST00000493430 DSCR9P59020 149 aa3.55□□□□□ -1.84
PTCD3-218ENST00000493430 ZNF543Q08ER8 600 aa3.55□□□□□ -1.84
PTCD3-218ENST00000493430 RALBP1Q15311 655 aa3.55□□□□□ -1.84
PTCD3-218ENST00000493430 SLC5A9Q2M3M2 681 aa3.55□□□□□ -1.84
PTCD3-218ENST00000493430 INO80DQ53TQ3 878 aaPredicted RBP3.55□□□□□ -1.84
PTCD3-218ENST00000493430 KIAA1755Q5JYT7 1200 aa3.55□□□□□ -1.84
PTCD3-218ENST00000493430 NR2C2APQ86WQ0 139 aa3.55□□□□□ -1.84
PTCD3-218ENST00000493430 TTC30AQ86WT1 665 aa3.55□□□□□ -1.84
PTCD3-218ENST00000493430 CCDC33Q8N5R6 958 aa3.55□□□□□ -1.84
PTCD3-218ENST00000493430 C7orf57Q8NEG2 295 aa3.55□□□□□ -1.84
PTCD3-218ENST00000493430 PHF21BQ96EK2 531 aa3.55□□□□□ -1.84
PTCD3-218ENST00000493430 MASTLQ96GX5 879 aa3.55□□□□□ -1.84
PTCD3-218ENST00000493430 SEZ6LQ9BYH1 1024 aa3.55□□□□□ -1.84
PTCD3-218ENST00000493430 OBP2AQ9NY56 170 aa3.55□□□□□ -1.84
PTCD3-218ENST00000493430 UBE2J1Q9Y385 318 aaPredicted RBP3.55□□□□□ -1.84
PTCD3-218ENST00000493430 PCDHB7Q9Y5E2 793 aa3.55□□□□□ -1.84
PTCD3-218ENST00000493430 DDX60LQ5H9U9 1706 aaKnown RBP3.55□□□□□ -1.84
PTCD3-218ENST00000493430 CEP350Q5VT06 3117 aa3.55□□□□□ -1.84
PTCD3-218ENST00000493430 NOTCH4Q99466 2003 aa3.54□□□□□ -1.84
PTCD3-218ENST00000493430 COL1A1P02452 1464 aaPredicted RBP3.54□□□□□ -1.84
PTCD3-218ENST00000493430 GBF1Q92538 1859 aa3.54□□□□□ -1.84
PTCD3-218ENST00000493430 DOCK5Q9H7D0 1870 aa3.54□□□□□ -1.84
PTCD3-218ENST00000493430 LAMA4Q16363 1823 aa3.54□□□□□ -1.84
PTCD3-218ENST00000493430 POM121BA6NF01 834 aa3.54□□□□□ -1.84
PTCD3-218ENST00000493430 GLTPD2A6NH11 291 aa3.54□□□□□ -1.84
PTCD3-218ENST00000493430 OR6C75A6NL08 312 aa3.54□□□□□ -1.84
PTCD3-218ENST00000493430 FOXO6A8MYZ6 492 aa3.54□□□□□ -1.84
PTCD3-218ENST00000493430 PODXLO00592 558 aa3.54□□□□□ -1.84
PTCD3-218ENST00000493430 NPC1O15118 1278 aa3.54□□□□□ -1.84
PTCD3-218ENST00000493430 PPIP5K2O43314 1243 aa3.54□□□□□ -1.84
PTCD3-218ENST00000493430 CNTN5O94779 1100 aa3.54□□□□□ -1.84
PTCD3-218ENST00000493430 IGKV5-2P06315 115 aa3.54□□□□□ -1.84
PTCD3-218ENST00000493430 ZNF853P0CG23 659 aa3.54□□□□□ -1.84
PTCD3-218ENST00000493430 SRGAP2BP0DMP2 458 aa3.54□□□□□ -1.84
PTCD3-218ENST00000493430 PIK3CBP42338 1070 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms