RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 ITGB7P26010 798 aa13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 CASP1P29466 404 aa13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 GCLMP48507 274 aa13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 RGS7P49802 495 aa13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 NUCB2P80303 420 aa13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 CEBPZQ03701 1054 aaKnown RBP13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 C1QL3Q5VWW1 255 aa13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 KIAA1161Q6NSJ0 714 aa13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 HEATR4Q86WZ0 1026 aa13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 SLITRK4Q8IW52 837 aa13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 SCML4Q8N228 414 aa13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 TEX19Q8NA77 164 aa13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 CHST14Q8NCH0 376 aa13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 GALNT11Q8NCW6 608 aa13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 DQX1Q8TE96 717 aaKnown RBP13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 KCTD13Q8WZ19 329 aa13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 SLC39A13Q96H72 371 aa13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 FEM1CQ96JP0 617 aa13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 TBATAQ96M53 351 aa13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 EPAS1Q99814 870 aa13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 HDAC8Q9BY41 377 aa13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 LRRC27Q9C0I9 530 aa13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 SEMA6CQ9H3T2 930 aa13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 MMRN2Q9H8L6 949 aa13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 CUEDC1Q9NWM3 386 aaPredicted RBP13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 TLR6Q9Y2C9 796 aa13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 CHD5Q8TDI0 1954 aa13.97□□□□□ -0.17
EXOSC3-207ENST00000490516 IGLON5A6NGN9 336 aa13.97□□□□□ -0.17
EXOSC3-207ENST00000490516 CNTN5O94779 1100 aa13.97□□□□□ -0.17
EXOSC3-207ENST00000490516 MT-CO1P00395 513 aa13.97□□□□□ -0.17
EXOSC3-207ENST00000490516 TRIM49P0CI25 452 aa13.97□□□□□ -0.17
EXOSC3-207ENST00000490516 TRIM49CP0CI26 452 aa13.97□□□□□ -0.17
EXOSC3-207ENST00000490516 SRCP12931 536 aa13.97□□□□□ -0.17
EXOSC3-207ENST00000490516 GRNP28799 593 aaKnown RBP13.97□□□□□ -0.17
EXOSC3-207ENST00000490516 UGT1A3P35503 534 aa13.97□□□□□ -0.17
EXOSC3-207ENST00000490516 THOP1P52888 689 aa13.97□□□□□ -0.17
EXOSC3-207ENST00000490516 PPP3CAQ08209 521 aa13.97□□□□□ -0.17
EXOSC3-207ENST00000490516 E2F4Q16254 413 aa13.97□□□□□ -0.17
EXOSC3-207ENST00000490516 DEFB109BQ30KR1 87 aa13.97□□□□□ -0.17
EXOSC3-207ENST00000490516 ARSIQ5FYB1 569 aa13.97□□□□□ -0.17
EXOSC3-207ENST00000490516 FAM114A1Q8IWE2 563 aa13.97□□□□□ -0.17
EXOSC3-207ENST00000490516 GPBAR1Q8TDU6 330 aa13.97□□□□□ -0.17
EXOSC3-207ENST00000490516 APOBEC4Q8WW27 367 aaKnown RBP13.97□□□□□ -0.17
EXOSC3-207ENST00000490516 LENG8Q96PV6 779 aaPredicted RBP13.97□□□□□ -0.17
EXOSC3-207ENST00000490516 FEM1AQ9BSK4 669 aa13.97□□□□□ -0.17
EXOSC3-207ENST00000490516 B3GNT4Q9C0J1 378 aa13.97□□□□□ -0.17
EXOSC3-207ENST00000490516 HESX1Q9UBX0 185 aa13.97□□□□□ -0.17
EXOSC3-207ENST00000490516 GPR34Q9UPC5 381 aa13.97□□□□□ -0.17
EXOSC3-207ENST00000490516 FARP1Q9Y4F1 1045 aaPredicted RBP13.97□□□□□ -0.17
EXOSC3-207ENST00000490516 FADS3Q9Y5Q0 445 aa13.97□□□□□ -0.17
EXOSC3-207ENST00000490516 ZFHX3Q15911 3703 aa13.96□□□□□ -0.17
EXOSC3-207ENST00000490516 WIPF3A6NGB9 483 aa13.96□□□□□ -0.17
EXOSC3-207ENST00000490516 K7ERQ8 282 aa13.96□□□□□ -0.17
EXOSC3-207ENST00000490516 PRNPP04156 253 aa13.96□□□□□ -0.17
EXOSC3-207ENST00000490516 FYNP06241 537 aa13.96□□□□□ -0.17
EXOSC3-207ENST00000490516 OAS2P29728 719 aaKnown RBP13.96□□□□□ -0.17
EXOSC3-207ENST00000490516 CDC20Q12834 499 aa13.96□□□□□ -0.17
EXOSC3-207ENST00000490516 SGCGQ13326 291 aa13.96□□□□□ -0.17
EXOSC3-207ENST00000490516 PTK2BQ14289 1009 aa13.96□□□□□ -0.17
EXOSC3-207ENST00000490516 ZC3H12AQ5D1E8 599 aaKnown RBP13.96□□□□□ -0.17
EXOSC3-207ENST00000490516 CEP135Q66GS9 1140 aa13.96□□□□□ -0.17
EXOSC3-207ENST00000490516 UNC13DQ70J99 1090 aa13.96□□□□□ -0.17
EXOSC3-207ENST00000490516 SLC9A9Q8IVB4 645 aa13.96□□□□□ -0.17
EXOSC3-207ENST00000490516 CACNA2D3Q8IZS8 1091 aa13.96□□□□□ -0.17
EXOSC3-207ENST00000490516 GOLGA5Q8TBA6 731 aa13.96□□□□□ -0.17
EXOSC3-207ENST00000490516 SCG3Q8WXD2 468 aaKnown RBP13.96□□□□□ -0.17
EXOSC3-207ENST00000490516 SLC45A3Q96JT2 553 aa13.96□□□□□ -0.17
EXOSC3-207ENST00000490516 SERPINB11Q96P15 392 aa13.96□□□□□ -0.17
EXOSC3-207ENST00000490516 C1QTNF2Q9BXJ5 285 aa13.96□□□□□ -0.17
EXOSC3-207ENST00000490516 CDH19Q9H159 772 aa13.96□□□□□ -0.17
EXOSC3-207ENST00000490516 PRDM8Q9NQV8 689 aa13.96□□□□□ -0.17
EXOSC3-207ENST00000490516 VPS28Q9UK41 221 aa13.96□□□□□ -0.17
EXOSC3-207ENST00000490516 TNRC6AQ8NDV7 1962 aaKnown RBP13.96□□□□□ -0.18
EXOSC3-207ENST00000490516 EFCAB7A8K855 629 aa13.95□□□□□ -0.18
EXOSC3-207ENST00000490516 F5H5T6 163 aa13.95□□□□□ -0.18
EXOSC3-207ENST00000490516 LEFTY1O75610 366 aa13.95□□□□□ -0.18
EXOSC3-207ENST00000490516 ADRB3P13945 408 aa13.95□□□□□ -0.18
EXOSC3-207ENST00000490516 IRAK1P51617 712 aa13.95□□□□□ -0.18
EXOSC3-207ENST00000490516 VAMP7P51809 220 aa13.95□□□□□ -0.18
EXOSC3-207ENST00000490516 NEK3P51956 506 aa13.95□□□□□ -0.18
EXOSC3-207ENST00000490516 PPARDQ03181 441 aa13.95□□□□□ -0.18
EXOSC3-207ENST00000490516 CENPCQ03188 943 aa13.95□□□□□ -0.18
EXOSC3-207ENST00000490516 EFHC2Q5JST6 749 aa13.95□□□□□ -0.18
EXOSC3-207ENST00000490516 ATP1A1-AS1Q5TC04 95 aa13.95□□□□□ -0.18
EXOSC3-207ENST00000490516 PMF1Q6P1K2 205 aa13.95□□□□□ -0.18
EXOSC3-207ENST00000490516 CNNM4Q6P4Q7 775 aa13.95□□□□□ -0.18
EXOSC3-207ENST00000490516 SPRED1Q7Z699 444 aa13.95□□□□□ -0.18
EXOSC3-207ENST00000490516 TAC4Q86UU9 113 aa13.95□□□□□ -0.18
EXOSC3-207ENST00000490516 EFCAB3Q8N7B9 438 aa13.95□□□□□ -0.18
EXOSC3-207ENST00000490516 ATP11CQ8NB49 1132 aa13.95□□□□□ -0.18
EXOSC3-207ENST00000490516 CCDC150Q8NCX0 1101 aa13.95□□□□□ -0.18
EXOSC3-207ENST00000490516 IRGQQ8WZA9 623 aa13.95□□□□□ -0.18
EXOSC3-207ENST00000490516 SEMA4DQ92854 862 aa13.95□□□□□ -0.18
EXOSC3-207ENST00000490516 CCDC114Q96M63 670 aa13.95□□□□□ -0.18
EXOSC3-207ENST00000490516 BLZF1Q9H2G9 400 aa13.95□□□□□ -0.18
EXOSC3-207ENST00000490516 CASS4Q9NQ75 786 aa13.95□□□□□ -0.18
EXOSC3-207ENST00000490516 IL36AQ9UHA7 158 aa13.95□□□□□ -0.18
EXOSC3-207ENST00000490516 GGT7Q9UJ14 662 aa13.95□□□□□ -0.18
EXOSC3-207ENST00000490516 OR51B4Q9Y5P0 310 aa13.95□□□□□ -0.18
EXOSC3-207ENST00000490516 ADGRG4Q8IZF6 3080 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms