RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 RCAN1P53805 252 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 VAMP2P63027 116 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 PSG6Q00889 435 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 TDGQ13569 410 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 SOWAHCQ53LP3 525 aaPredicted RBP5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 PLAC9Q5JTB6 97 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 SLC9C2Q5TAH2 1124 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 ABHD17BQ5VST6 288 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 KIAA1324Q6UXG2 1013 aaKnown RBP5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 C1orf122Q6ZSJ8 110 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 PTCHD4Q6ZW05 846 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 BBS12Q6ZW61 710 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 CLEC4CQ8WTT0 213 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 ST8SIA4Q92187 359 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 HERC2P3Q9BVR0 1158 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 CINPQ9BW66 212 aaPredicted RBP5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 JMJD4Q9H9V9 463 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 SNX15Q9NRS6 342 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 ANGPTL2Q9UKU9 493 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 HSF4Q9ULV5 492 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 ST3GAL5Q9UNP4 418 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 SH2B3Q9UQQ2 575 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 KIF20BQ96Q89 1820 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 NOTCH2Q04721 2471 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 ABCC4O15439 1325 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 QSOX1O00391 747 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 MPPED1O15442 326 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 SUV39H1O43463 412 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 TMPRSS11DO60235 418 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 TSPAN3O60637 253 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 PRAMEF2O60811 474 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 CENPBP07199 599 aaPredicted RBP5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 CSF1P09603 554 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 FAM163BP0C2L3 166 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 ZNF20P17024 532 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 FPR3P25089 353 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 GALNSP34059 522 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 PGM1P36871 562 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 CASP2P42575 452 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 PCP4P48539 62 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 DIO1P49895 249 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 CTSWP56202 376 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 TAS2R50P59544 299 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 RAE1P78406 368 aaKnown RBP5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 CCDC15Q0P6D6 951 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 DNASE1L3Q13609 305 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 CDSNQ15517 529 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 EPHA10Q5JZY3 1008 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 LY6G5CQ5SRR4 150 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 HYIQ5T013 277 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 CCDC30Q5VVM6 783 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 ACSM6Q6P461 480 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 KIRREL2Q6UWL6 708 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 ZNF551Q7Z340 670 aaPredicted RBP5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 PCGF5Q86SE9 256 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 TBC1D1Q86TI0 1168 aaPredicted RBP5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 PNPLA1Q8N8W4 532 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 ABHD11Q8NFV4 315 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 CXorf38Q8TB03 319 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 CACTINQ8WUQ7 758 aaKnown RBP5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 ARRDC3Q96B67 414 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 LENG9Q96B70 501 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 LENG8Q96PV6 779 aaPredicted RBP5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 CLPBQ9H078 707 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 ACAD9Q9H845 621 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 PREBQ9HCU5 417 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 TMLHEQ9NVH6 421 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 SWAP70Q9UH65 585 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 AFG3L2Q9Y4W6 797 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 A0A1B0GUL6 1792 aa5.31□□□□□ -1.56
SSX2IP-208ENST00000490476 CCDC196A0A1B0GTZ2 297 aa5.3□□□□□ -1.56
SSX2IP-208ENST00000490476 WDR27A2RRH5 827 aa5.3□□□□□ -1.56
SSX2IP-208ENST00000490476 MBD3L5A6NJ08 208 aaPredicted RBP5.3□□□□□ -1.56
SSX2IP-208ENST00000490476 URI1O94763 535 aaPredicted RBP5.3□□□□□ -1.56
SSX2IP-208ENST00000490476 TTLL1O95922 423 aa5.3□□□□□ -1.56
SSX2IP-208ENST00000490476 KCNA5P22460 613 aa5.3□□□□□ -1.56
SSX2IP-208ENST00000490476 MAN1A1P33908 653 aa5.3□□□□□ -1.56
SSX2IP-208ENST00000490476 JAK3P52333 1124 aa5.3□□□□□ -1.56
SSX2IP-208ENST00000490476 COPB1P53618 953 aaKnown RBP5.3□□□□□ -1.56
SSX2IP-208ENST00000490476 RIPPLY3P57055 190 aa5.3□□□□□ -1.56
SSX2IP-208ENST00000490476 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.3□□□□□ -1.56
SSX2IP-208ENST00000490476 GALNT2Q10471 571 aa5.3□□□□□ -1.56
SSX2IP-208ENST00000490476 LMAN2Q12907 356 aa5.3□□□□□ -1.56
SSX2IP-208ENST00000490476 TUBA3CQ13748 450 aa5.3□□□□□ -1.56
SSX2IP-208ENST00000490476 DCTN1Q14203 1278 aa5.3□□□□□ -1.56
SSX2IP-208ENST00000490476 PTPAQ15257 358 aa5.3□□□□□ -1.56
SSX2IP-208ENST00000490476 FAM187BQ17R55 369 aa5.3□□□□□ -1.56
SSX2IP-208ENST00000490476 TBC1D25Q3MII6 688 aa5.3□□□□□ -1.56
SSX2IP-208ENST00000490476 DENND2CQ68D51 928 aa5.3□□□□□ -1.56
SSX2IP-208ENST00000490476 LAIR1Q6GTX8 287 aa5.3□□□□□ -1.56
SSX2IP-208ENST00000490476 WDR93Q6P2C0 686 aa5.3□□□□□ -1.56
SSX2IP-208ENST00000490476 ZNF530Q6P9A1 599 aaPredicted RBP5.3□□□□□ -1.56
SSX2IP-208ENST00000490476 TUBA3EQ6PEY2 450 aa5.3□□□□□ -1.56
SSX2IP-208ENST00000490476 Q6ZNX1 250 aa5.3□□□□□ -1.56
SSX2IP-208ENST00000490476 MRGPREQ86SM8 312 aa5.3□□□□□ -1.56
SSX2IP-208ENST00000490476 PEG10Q86TG7 708 aaKnown RBP5.3□□□□□ -1.56
SSX2IP-208ENST00000490476 RP9Q8TA86 221 aaKnown RBP5.3□□□□□ -1.56
SSX2IP-208ENST00000490476 KCNG4Q8TDN1 519 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms