RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 GNAT1P11488 350 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 KCNA5P22460 613 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 HCAR3P49019 387 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 DSG1Q02413 1049 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 MORN1Q5T089 497 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 ZC3HC1Q86WB0 502 aaKnown RBP12.86□□□□□ -0.35
CLIC4-202ENST00000488683 GDPD5Q8WTR4 605 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 RCN3Q96D15 328 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 PGAP3Q96FM1 320 aaPredicted RBP12.86□□□□□ -0.35
CLIC4-202ENST00000488683 GCNAQ96QF7 691 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 SLC39A8Q9C0K1 460 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 TCF7L2Q9NQB0 619 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 ANGPTL2Q9UKU9 493 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 NEU3Q9UQ49 428 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 CDH23Q9H251 3354 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 CAPN8A6NHC0 703 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 TRIM13O60858 407 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 CHRNA1P02708 482 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 ARNTP27540 789 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 CD52P31358 61 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 AIF1P55008 147 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 MRPS22P82650 360 aaKnown RBP12.86□□□□□ -0.35
CLIC4-202ENST00000488683 TSTD2Q5T7W7 516 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 GDF6Q6KF10 455 aaPredicted RBP12.86□□□□□ -0.35
CLIC4-202ENST00000488683 IRGCQ6NXR0 463 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 CNSTQ6PJW8 725 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 PDZD4Q76G19 769 aaPredicted RBP12.86□□□□□ -0.35
CLIC4-202ENST00000488683 CIR1Q86X95 450 aaPredicted RBP12.86□□□□□ -0.35
CLIC4-202ENST00000488683 LSMEM2Q8N112 164 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 CASP10Q92851 521 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 GATA6Q92908 595 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 TSPAN18Q96SJ8 248 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 C1QTNF1Q9BXJ1 281 aa12.86□□□□□ -0.35
CLIC4-202ENST00000488683 C9JVG2 144 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 GRID2O43424 1007 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 DLX3O60479 287 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 B4GALT3O60512 393 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 CELF2O95319 508 aaKnown RBP12.85□□□□□ -0.35
CLIC4-202ENST00000488683 HLA-DQB2P05538 268 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 LYNP07948 512 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 XRCC1P18887 633 aaPredicted RBP12.85□□□□□ -0.35
CLIC4-202ENST00000488683 SLC1A2P43004 574 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 CSRP3P50461 194 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 ITKQ08881 620 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 GRAMD1BQ3KR37 738 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 PGM2L1Q6PCE3 622 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 PAOXQ6QHF9 649 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 TMC7Q7Z402 723 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 TTC16Q8NEE8 873 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 EXT2Q93063 718 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 PHF21BQ96EK2 531 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 TMA16Q96EY4 203 aaKnown RBP12.85□□□□□ -0.35
CLIC4-202ENST00000488683 ELMO2Q96JJ3 720 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 B3GALT6Q96L58 329 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 CDRT15Q96T59 188 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 TLK1Q9UKI8 766 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 NYNRINQ9P2P1 1898 aaKnown RBP12.85□□□□□ -0.35
CLIC4-202ENST00000488683 NCAM2O15394 837 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 PAGE1O75459 146 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 PIK3R1P27986 724 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 HOXC8P31273 242 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 LHX1P48742 406 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 CDK7P50613 346 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 THOP1P52888 689 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 MS4A2Q01362 244 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 TRIM32Q13049 653 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 MAP2K5Q13163 448 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 IHHQ14623 411 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 FSCN1Q16658 493 aaKnown RBP12.85□□□□□ -0.35
CLIC4-202ENST00000488683 PPP1R3AQ16821 1122 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 ARL13BQ3SXY8 428 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 GNASQ5JWF2 1037 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 ZNF470Q6ECI4 717 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 FBXL19Q6PCT2 694 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 DHDDSQ86SQ9 333 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 ZNF354CQ86Y25 554 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 SCN4BQ8IWT1 228 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 EPAS1Q99814 870 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 IL22Q9GZX6 179 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 TRPV6Q9H1D0 765 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 NMUR1Q9HB89 426 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 OXSMQ9NWU1 459 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 OSER1Q9NX31 292 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 SCOCQ9UIL1 159 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 KCTD3Q9Y597 815 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 ACTL7AQ9Y615 435 aa12.85□□□□□ -0.35
CLIC4-202ENST00000488683 C5orf42Q9H799 3197 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 FNDC1Q4ZHG4 1894 aaPredicted RBP12.84□□□□□ -0.35
CLIC4-202ENST00000488683 ATP6AP2A0A1C7CYW4 349 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 UNCXA6NJT0 531 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 CCNT2O60583 730 aaKnown RBP12.84□□□□□ -0.35
CLIC4-202ENST00000488683 ATP6AP2O75787 350 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 TBX18O95935 607 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 MPOP05164 745 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 HMBSP08397 361 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 PIRTP0C851 137 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 TFEBP19484 476 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 SOX11P35716 441 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 ETFBP38117 255 aa12.84□□□□□ -0.35
CLIC4-202ENST00000488683 CPT1AP50416 773 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms