RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 PSTKQ8IV42 348 aaKnown RBP20.02■□□□□ 0.8
RPUSD3-216ENST00000484134 ZBTB8BQ8NAP8 495 aaPredicted RBP20.02■□□□□ 0.8
RPUSD3-216ENST00000484134 RDH11Q8TC12 318 aa20.02■□□□□ 0.8
RPUSD3-216ENST00000484134 RNF139Q8WU17 664 aa20.02■□□□□ 0.8
RPUSD3-216ENST00000484134 C12orf43Q96C57 262 aaKnown RBP20.02■□□□□ 0.8
RPUSD3-216ENST00000484134 MAELQ96JY0 434 aaKnown RBP20.02■□□□□ 0.8
RPUSD3-216ENST00000484134 GPR20Q99678 358 aa20.02■□□□□ 0.8
RPUSD3-216ENST00000484134 UNC93B1Q9H1C4 597 aa20.02■□□□□ 0.8
RPUSD3-216ENST00000484134 TBCCD1Q9NVR7 557 aa20.02■□□□□ 0.8
RPUSD3-216ENST00000484134 CNOT6Q9ULM6 557 aaKnown RBP20.02■□□□□ 0.8
RPUSD3-216ENST00000484134 TANC1Q9C0D5 1861 aa20.02■□□□□ 0.8
RPUSD3-216ENST00000484134 SLCO1B7G3V0H7 640 aa20.02■□□□□ 0.8
RPUSD3-216ENST00000484134 TIPRLO75663 272 aa20.02■□□□□ 0.8
RPUSD3-216ENST00000484134 DDHD2O94830 711 aa20.02■□□□□ 0.8
RPUSD3-216ENST00000484134 AP2A1O95782 977 aa20.02■□□□□ 0.8
RPUSD3-216ENST00000484134 C6orf10Q5SRN2 563 aa20.02■□□□□ 0.8
RPUSD3-216ENST00000484134 PATL1Q86TB9 770 aaKnown RBP20.02■□□□□ 0.8
RPUSD3-216ENST00000484134 GPR180Q86V85 440 aa20.02■□□□□ 0.8
RPUSD3-216ENST00000484134 PELI3Q8N2H9 469 aa20.02■□□□□ 0.8
RPUSD3-216ENST00000484134 HM13Q8TCT9 377 aa20.02■□□□□ 0.8
RPUSD3-216ENST00000484134 UHRF1Q96T88 793 aaPredicted RBP20.02■□□□□ 0.8
RPUSD3-216ENST00000484134 GPR22Q99680 433 aa20.02■□□□□ 0.8
RPUSD3-216ENST00000484134 CASS4Q9NQ75 786 aa20.02■□□□□ 0.8
RPUSD3-216ENST00000484134 CACNA2D2Q9NY47 1150 aa20.02■□□□□ 0.8
RPUSD3-216ENST00000484134 KLHL8Q9P2G9 620 aaPredicted RBP20.02■□□□□ 0.8
RPUSD3-216ENST00000484134 TLK1Q9UKI8 766 aa20.02■□□□□ 0.8
RPUSD3-216ENST00000484134 FAM155AB1AL88 458 aaPredicted RBP20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 APOA4P06727 396 aa20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 MCF2P10911 925 aa20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 PTPN3P26045 913 aa20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 NMBRP28336 390 aa20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 SLC7A1P30825 629 aa20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 CSE1LP55060 971 aaKnown RBP20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 NUP107P57740 925 aa20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 ANO4Q32M45 955 aa20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 ZBTB49Q6ZSB9 765 aa20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 ZC3HC1Q86WB0 502 aaKnown RBP20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 ZDHHC17Q8IUH5 632 aa20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 GIPC3Q8TF64 312 aa20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 TFAP2CQ92754 450 aa20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 TRPC7Q9HCX4 862 aa20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 SFMBT1Q9UHJ3 866 aa20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 SLC8A2Q9UPR5 921 aa20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 SYNJ2BP-COX16A0A087WUM0 186 aa20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 DLGAP1O14490 977 aa20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 CD97P48960 835 aa20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 NAA20P61599 178 aa20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 PRKCQQ04759 706 aa20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 USP10Q14694 798 aaKnown RBP20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 STON2Q8WXE9 905 aa20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 MLPHQ9BV36 600 aaPredicted RBP20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 COX16Q9P0S2 106 aa20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 XPR1Q9UBH6 696 aa20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 CD300AQ9UGN4 299 aa20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 MID2Q9UJV3 735 aa20.01■□□□□ 0.79
RPUSD3-216ENST00000484134 ADORA2BP29275 332 aa20■□□□□ 0.79
RPUSD3-216ENST00000484134 FRG1Q14331 258 aaKnown RBP20■□□□□ 0.79
RPUSD3-216ENST00000484134 OTUD1Q5VV17 481 aaPredicted RBP20■□□□□ 0.79
RPUSD3-216ENST00000484134 PRAMEF18Q5VWM3 479 aa20■□□□□ 0.79
RPUSD3-216ENST00000484134 CNSTQ6PJW8 725 aa20■□□□□ 0.79
RPUSD3-216ENST00000484134 GPR141Q7Z602 305 aa20■□□□□ 0.79
RPUSD3-216ENST00000484134 ANKRD23Q86SG2 305 aa20■□□□□ 0.79
RPUSD3-216ENST00000484134 GPR78Q96P69 363 aa20■□□□□ 0.79
RPUSD3-216ENST00000484134 TNFRSF12AQ9NP84 129 aa20■□□□□ 0.79
RPUSD3-216ENST00000484134 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20■□□□□ 0.79
RPUSD3-216ENST00000484134 CLEC11AQ9Y240 323 aa20■□□□□ 0.79
RPUSD3-216ENST00000484134 FIS1Q9Y3D6 152 aa20■□□□□ 0.79
RPUSD3-216ENST00000484134 HEATR9A2RTY3 570 aa20■□□□□ 0.79
RPUSD3-216ENST00000484134 ZBTB24O43167 697 aaPredicted RBP20■□□□□ 0.79
RPUSD3-216ENST00000484134 ATE1O95260 518 aa20■□□□□ 0.79
RPUSD3-216ENST00000484134 CD68P34810 354 aaPredicted RBP20■□□□□ 0.79
RPUSD3-216ENST00000484134 SLC5A3P53794 718 aa20■□□□□ 0.79
RPUSD3-216ENST00000484134 KCTD11Q693B1 232 aa20■□□□□ 0.79
RPUSD3-216ENST00000484134 REP15Q6BDI9 236 aa20■□□□□ 0.79
RPUSD3-216ENST00000484134 PPP4R4Q6NUP7 873 aa20■□□□□ 0.79
RPUSD3-216ENST00000484134 LAYNQ6UX15 382 aa20■□□□□ 0.79
RPUSD3-216ENST00000484134 SLC41A1Q8IVJ1 513 aa20■□□□□ 0.79
RPUSD3-216ENST00000484134 C12orf42Q96LP6 360 aa20■□□□□ 0.79
RPUSD3-216ENST00000484134 A0A087WZ62 844 aa19.99■□□□□ 0.79
RPUSD3-216ENST00000484134 TMEM221A6NGB7 291 aa19.99■□□□□ 0.79
RPUSD3-216ENST00000484134 TRIM64CA6NLI5 447 aa19.99■□□□□ 0.79
RPUSD3-216ENST00000484134 ZNF839A8K0R7 811 aa19.99■□□□□ 0.79
RPUSD3-216ENST00000484134 HNRNPLP14866 589 aaKnown RBP eCLIP19.99■□□□□ 0.79
RPUSD3-216ENST00000484134 YBX3P16989 372 aaKnown RBP eCLIP19.99■□□□□ 0.791e-6■■□□□ 12
RPUSD3-216ENST00000484134 ARF4P18085 180 aaPredicted RBP19.99■□□□□ 0.79
RPUSD3-216ENST00000484134 EDNRBP24530 442 aa19.99■□□□□ 0.79
RPUSD3-216ENST00000484134 PPP1R3AQ16821 1122 aa19.99■□□□□ 0.79
RPUSD3-216ENST00000484134 ZBED5Q49AG3 693 aa19.99■□□□□ 0.79
RPUSD3-216ENST00000484134 PITRM1Q5JRX3 1037 aa19.99■□□□□ 0.79
RPUSD3-216ENST00000484134 LRRC8EQ6NSJ5 796 aa19.99■□□□□ 0.79
RPUSD3-216ENST00000484134 STRADAQ7RTN6 431 aa19.99■□□□□ 0.79
RPUSD3-216ENST00000484134 MFSD6LQ8IWD5 586 aa19.99■□□□□ 0.79
RPUSD3-216ENST00000484134 DEFB106AQ8N104 65 aa19.99■□□□□ 0.79
RPUSD3-216ENST00000484134 NXNL1Q96CM4 212 aa19.99■□□□□ 0.79
RPUSD3-216ENST00000484134 SGF29Q96ES7 293 aa19.99■□□□□ 0.79
RPUSD3-216ENST00000484134 DUS3LQ96G46 650 aaKnown RBP19.99■□□□□ 0.79
RPUSD3-216ENST00000484134 FDXACB1Q9BRP7 624 aaPredicted RBP19.99■□□□□ 0.79
RPUSD3-216ENST00000484134 VPS45Q9NRW7 570 aa19.99■□□□□ 0.79
RPUSD3-216ENST00000484134 PRMT7Q9NVM4 692 aaPredicted RBP19.99■□□□□ 0.79
RPUSD3-216ENST00000484134 SARDHQ9UL12 918 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms