RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 EIF2B5Q13144 721 aaKnown RBP17.72■□□□□ 0.43
RXRB-203ENST00000481441 PDE1CQ14123 709 aaPredicted RBP17.72■□□□□ 0.43
RXRB-203ENST00000481441 COBLL1Q53SF7 1204 aa17.72■□□□□ 0.43
RXRB-203ENST00000481441 SLC35F3Q8IY50 421 aa17.72■□□□□ 0.43
RXRB-203ENST00000481441 DEFB106AQ8N104 65 aa17.72■□□□□ 0.43
RXRB-203ENST00000481441 NAT6Q93015 286 aa17.72■□□□□ 0.43
RXRB-203ENST00000481441 LIN37Q96GY3 246 aaPredicted RBP17.72■□□□□ 0.43
RXRB-203ENST00000481441 PPP1R16AQ96I34 528 aa17.72■□□□□ 0.43
RXRB-203ENST00000481441 FEM1CQ96JP0 617 aa17.72■□□□□ 0.43
RXRB-203ENST00000481441 SPATA32Q96LK8 384 aa17.72■□□□□ 0.43
RXRB-203ENST00000481441 KREMEN1Q96MU8 473 aa17.72■□□□□ 0.43
RXRB-203ENST00000481441 SLC2A13Q96QE2 648 aa17.72■□□□□ 0.43
RXRB-203ENST00000481441 C1QTNF2Q9BXJ5 285 aa17.72■□□□□ 0.43
RXRB-203ENST00000481441 GOLPH3LQ9H4A5 285 aa17.72■□□□□ 0.43
RXRB-203ENST00000481441 COX16Q9P0S2 106 aa17.72■□□□□ 0.43
RXRB-203ENST00000481441 IPO11Q9UI26 975 aaKnown RBP17.72■□□□□ 0.43
RXRB-203ENST00000481441 FADS3Q9Y5Q0 445 aa17.72■□□□□ 0.43
RXRB-203ENST00000481441 WASF2Q9Y6W5 498 aa17.72■□□□□ 0.43
RXRB-203ENST00000481441 BOD1L1Q8NFC6 3051 aa17.72■□□□□ 0.43
RXRB-203ENST00000481441 TRIM49BA6NDI0 452 aa17.71■□□□□ 0.42
RXRB-203ENST00000481441 NTN3O00634 580 aaPredicted RBP17.71■□□□□ 0.42
RXRB-203ENST00000481441 SUV39H1O43463 412 aa17.71■□□□□ 0.42
RXRB-203ENST00000481441 PAGE1O75459 146 aa17.71■□□□□ 0.42
RXRB-203ENST00000481441 GCATO75600 419 aa17.71■□□□□ 0.42
RXRB-203ENST00000481441 LEFTY1O75610 366 aa17.71■□□□□ 0.42
RXRB-203ENST00000481441 CNTN5O94779 1100 aa17.71■□□□□ 0.42
RXRB-203ENST00000481441 GJB6O95452 261 aa17.71■□□□□ 0.42
RXRB-203ENST00000481441 ITGB2P05107 769 aa17.71■□□□□ 0.42
RXRB-203ENST00000481441 SLC5A2P31639 672 aa17.71■□□□□ 0.42
RXRB-203ENST00000481441 RPIAP49247 311 aa17.71■□□□□ 0.42
RXRB-203ENST00000481441 MTA1Q13330 715 aa17.71■□□□□ 0.42
RXRB-203ENST00000481441 SPIDRQ14159 915 aa17.71■□□□□ 0.42
RXRB-203ENST00000481441 TGIF1Q15583 401 aa17.71■□□□□ 0.42
RXRB-203ENST00000481441 ALFQ53S48 1182 aa17.71■□□□□ 0.42
RXRB-203ENST00000481441 C22orf39Q6P5X5 142 aa17.71■□□□□ 0.42
RXRB-203ENST00000481441 LINGO4Q6UY18 593 aa17.71■□□□□ 0.42
RXRB-203ENST00000481441 DPY19L3Q6ZPD9 716 aa17.71■□□□□ 0.42
RXRB-203ENST00000481441 USP53Q70EK8 1073 aa17.71■□□□□ 0.42
RXRB-203ENST00000481441 RBFAQ8N0V3 343 aa17.71■□□□□ 0.42
RXRB-203ENST00000481441 EXTL1Q92935 676 aa17.71■□□□□ 0.42
RXRB-203ENST00000481441 SGF29Q96ES7 293 aa17.71■□□□□ 0.42
RXRB-203ENST00000481441 LENG8Q96PV6 779 aaPredicted RBP17.71■□□□□ 0.42
RXRB-203ENST00000481441 CCDC3Q9BQI4 270 aa17.71■□□□□ 0.42
RXRB-203ENST00000481441 TNKS2Q9H2K2 1166 aa17.71■□□□□ 0.42
RXRB-203ENST00000481441 TCEAL2Q9H3H9 227 aaPredicted RBP17.71■□□□□ 0.42
RXRB-203ENST00000481441 SPASTQ9UBP0 616 aa17.71■□□□□ 0.42
RXRB-203ENST00000481441 ACSL6Q9UKU0 697 aa17.71■□□□□ 0.42
RXRB-203ENST00000481441 FPGTO14772 594 aa17.7■□□□□ 0.42
RXRB-203ENST00000481441 PLD2O14939 933 aa17.7■□□□□ 0.42
RXRB-203ENST00000481441 ZNF821O75541 412 aaPredicted RBP17.7■□□□□ 0.42
RXRB-203ENST00000481441 ZNF202O95125 648 aa17.7■□□□□ 0.42
RXRB-203ENST00000481441 RHOCP08134 193 aa17.7■□□□□ 0.42
RXRB-203ENST00000481441 GLI1P08151 1106 aa17.7■□□□□ 0.42
RXRB-203ENST00000481441 ITGB7P26010 798 aa17.7■□□□□ 0.42
RXRB-203ENST00000481441 PFN3P60673 137 aa17.7■□□□□ 0.42
RXRB-203ENST00000481441 LRRC63Q05C16 580 aa17.7■□□□□ 0.42
RXRB-203ENST00000481441 PDCLQ13371 301 aa17.7■□□□□ 0.42
RXRB-203ENST00000481441 DCAF4L2Q8NA75 395 aa17.7■□□□□ 0.42
RXRB-203ENST00000481441 BTN2A2Q8WVV5 523 aa17.7■□□□□ 0.42
RXRB-203ENST00000481441 GLMNQ92990 594 aa17.7■□□□□ 0.42
RXRB-203ENST00000481441 SRRTQ9BXP5 876 aaKnown RBP17.7■□□□□ 0.42
RXRB-203ENST00000481441 A0A0D9SEW6 157 aa17.69■□□□□ 0.42
RXRB-203ENST00000481441 LMO7DNF2Z398 122 aa17.69■□□□□ 0.42
RXRB-203ENST00000481441 P4HA2O15460 535 aa17.69■□□□□ 0.42
RXRB-203ENST00000481441 AP1G1O43747 822 aa17.69■□□□□ 0.42
RXRB-203ENST00000481441 LETM1O95202 739 aaPredicted RBP17.69■□□□□ 0.42
RXRB-203ENST00000481441 L1CAMP32004 1257 aa17.69■□□□□ 0.42
RXRB-203ENST00000481441 UGT1A5P35504 534 aa17.69■□□□□ 0.42
RXRB-203ENST00000481441 RECQLP46063 649 aaPredicted RBP17.69■□□□□ 0.42
RXRB-203ENST00000481441 ADKP55263 362 aaKnown RBP17.69■□□□□ 0.42
RXRB-203ENST00000481441 SRSF6Q13247 344 aaKnown RBP17.69■□□□□ 0.42
RXRB-203ENST00000481441 C1orf61Q13536 156 aa17.69■□□□□ 0.42
RXRB-203ENST00000481441 ZNF658Q5TYW1 1059 aaPredicted RBP17.69■□□□□ 0.42
RXRB-203ENST00000481441 ZNF574Q6ZN55 896 aaPredicted RBP17.69■□□□□ 0.42
RXRB-203ENST00000481441 B3GNT8Q7Z7M8 397 aa17.69■□□□□ 0.42
RXRB-203ENST00000481441 ZSCAN30Q86W11 494 aa17.69■□□□□ 0.42
RXRB-203ENST00000481441 ZNF606Q8WXB4 792 aa17.69■□□□□ 0.42
RXRB-203ENST00000481441 TBATAQ96M53 351 aa17.69■□□□□ 0.42
RXRB-203ENST00000481441 SEMA3CQ99985 751 aa17.69■□□□□ 0.42
RXRB-203ENST00000481441 ARHGAP9Q9BRR9 750 aa17.69■□□□□ 0.42
RXRB-203ENST00000481441 SIK2Q9H0K1 926 aa17.69■□□□□ 0.42
RXRB-203ENST00000481441 WDR70Q9NW82 654 aa17.69■□□□□ 0.42
RXRB-203ENST00000481441 ASNSD1Q9NWL6 643 aa17.69■□□□□ 0.42
RXRB-203ENST00000481441 APOBEC3BQ9UH17 382 aaKnown RBP17.69■□□□□ 0.42
RXRB-203ENST00000481441 PNMA8BQ9ULN7 279 aaPredicted RBP17.69■□□□□ 0.42
RXRB-203ENST00000481441 PADI4Q9UM07 663 aa17.69■□□□□ 0.42
RXRB-203ENST00000481441 DOCK4Q8N1I0 1966 aa17.69■□□□□ 0.42
RXRB-203ENST00000481441 COL12A1Q99715 3063 aa17.68■□□□□ 0.42
RXRB-203ENST00000481441 A0A1W2PQ27 194 aa17.68■□□□□ 0.42
RXRB-203ENST00000481441 A0A1W2PQ64 194 aa17.68■□□□□ 0.42
RXRB-203ENST00000481441 IGLON5A6NGN9 336 aa17.68■□□□□ 0.42
RXRB-203ENST00000481441 MED7O43513 233 aa17.68■□□□□ 0.42
RXRB-203ENST00000481441 ENDOD1O94919 500 aa17.68■□□□□ 0.42
RXRB-203ENST00000481441 FAM87AP0C7U9 286 aa17.68■□□□□ 0.42
RXRB-203ENST00000481441 KRT5P13647 590 aa17.68■□□□□ 0.42
RXRB-203ENST00000481441 CETN1Q12798 172 aa17.68■□□□□ 0.42
RXRB-203ENST00000481441 NME3Q13232 169 aa17.68■□□□□ 0.42
RXRB-203ENST00000481441 SGCGQ13326 291 aa17.68■□□□□ 0.42
RXRB-203ENST00000481441 EIF3IQ13347 325 aaKnown RBP17.68■□□□□ 0.42
RXRB-203ENST00000481441 PNOCQ13519 176 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms