RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 CPXM1Q96SM3 734 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 KDM4CQ9H3R0 1056 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 SYNDIG1Q9H7V2 258 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 UBE2TQ9NPD8 197 aaPredicted RBP9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 CTNND2Q9UQB3 1225 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 OR51B4Q9Y5P0 310 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 CCDC187A0A096LP49 1063 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 BICDL2A1A5D9 508 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 BECN2A8MW95 431 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 PRAMEF26H0Y7S4 382 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 MCF2LO15068 1137 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 ALOX15BO15296 676 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 GRAP2O75791 330 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 GNA14O95837 355 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 GLI1P08151 1106 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 PRLRP16471 622 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 PPP1R2P41236 205 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 MLLT3P42568 568 aaPredicted RBP9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 MARSP56192 900 aaKnown RBP9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 STX17P56962 302 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 TAS2R38P59533 333 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 AUHQ13825 339 aaKnown RBP9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 MORC3Q14149 939 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 ACCSLQ4AC99 568 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 PERM1Q5SV97 790 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 PIP5KL1Q5T9C9 394 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 GJB7Q6PEY0 223 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 ENOSF1Q7L5Y1 443 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 PASD1Q8IV76 773 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 DEFB106AQ8N104 65 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 WDTC1Q8N5D0 677 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 TMEM145Q8NBT3 493 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 OR13H1Q8NG92 308 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 RNF34Q969K3 372 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 GRAMD1AQ96CP6 724 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 KLHDC7BQ96G42 594 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 CRACR2AQ9BSW2 395 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 CALN1Q9BXU9 219 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 PREBQ9HCU5 417 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 FZD3Q9NPG1 666 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 KLHL11Q9NVR0 708 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 SLC25A13Q9UJS0 675 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 VPS28Q9UK41 221 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 VANGL2Q9ULK5 521 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 HS3ST4Q9Y661 456 aa9.65□□□□□ -0.86
SMARCE1-210ENST00000481231 A0A1W2PQU0 124 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 A1L4Q6 167 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 C1QTNF3-AMACRE9PGA6 284 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 AGRPO00253 132 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 BIN1O00499 593 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 PLD2O14939 933 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 SCAMP1O15126 338 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 MUSKO15146 869 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 SLC31A1O15431 190 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 BNIP3LO60238 219 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 SNAP91O60641 907 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 RNGTTO60942 597 aaKnown RBP9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 HSF2BPO75031 334 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 PAGE1O75459 146 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 CLDN11O75508 207 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 MT-CO1P00395 513 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 CTSLP07711 333 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 SRCP12931 536 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 ZNF18P17022 549 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 USP8P40818 1118 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 APBA1Q02410 837 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 NME3Q13232 169 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 KCNAB2Q13303 367 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 MANEAQ5SRI9 462 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 OTUD1Q5VV17 481 aaPredicted RBP9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 ZNF787Q6DD87 383 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 OLFML1Q6UWY5 402 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 FAM183BPQ6ZVS7 135 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 B3GNT8Q7Z7M8 397 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 ELOA2Q8IYF1 753 aaPredicted RBP9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 SLC22A18ASQ8N1D0 253 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 SH2D3CQ8N5H7 860 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 KLK6Q92876 244 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 PPP1R13BQ96KQ4 1090 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 NOX5Q96PH1 765 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 PPP1R9BQ96SB3 815 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 SRRTQ9BXP5 876 aaKnown RBP9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 USP29Q9HBJ7 922 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 EPB41L5Q9HCM4 733 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 EVA1BQ9NVM1 165 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 ASNSD1Q9NWL6 643 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 HS3ST2Q9Y278 367 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 TBC1D30Q9Y2I9 924 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 PCDHGA7Q9Y5G6 932 aa9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 ZFC3H1O60293 1989 aaKnown RBP9.64□□□□□ -0.87
SMARCE1-210ENST00000481231 K7ERQ8 282 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 KPNA3O00505 521 aaPredicted RBP9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 DAB1O75553 588 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 TCEA3O75764 348 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 CNTN5O94779 1100 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 ERBB2P04626 1255 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 RNF224P0DH78 156 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 LIPCP11150 499 aa9.63□□□□□ -0.87
SMARCE1-210ENST00000481231 UGT1A5P35504 534 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms