RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 NR3C2P08235 984 aa18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 NR2C2P49116 596 aa18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 MAPK10P53779 464 aa18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 BAATQ14032 418 aaPredicted RBP18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 SPANXN3Q5MJ09 141 aa18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 REP15Q6BDI9 236 aa18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 ZPBP2Q6X784 338 aa18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 KCTD8Q6ZWB6 473 aa18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 TAMM41Q96BW9 452 aa18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 TMEM176AQ96HP8 235 aa18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 WNK4Q96J92 1243 aa18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 LGMNQ99538 433 aa18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 TDRD1Q9BXT4 1180 aaKnown RBP18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 RIC8BQ9NVN3 520 aa18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 GIN1Q9NXP7 522 aa18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 CPSF3Q9UKF6 684 aaKnown RBP18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 SARDHQ9UL12 918 aa18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 RIPK3Q9Y572 518 aa18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 KRBA1A5PL33 1030 aa18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 CCND2P30279 289 aa18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 OLIG2Q13516 323 aa18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 SLC36A3Q495N2 470 aa18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 LRRC8EQ6NSJ5 796 aa18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 FAM117BQ6P1L5 589 aa18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 GALNT18Q6P9A2 607 aa18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 CAMK1DQ8IU85 385 aa18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 PACRGLQ8N7B6 248 aa18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 FBXL20Q96IG2 436 aa18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 EIF2AQ9BY44 585 aaKnown RBP18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 EIF2B3Q9NR50 452 aaKnown RBP18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 MID2Q9UJV3 735 aa18.86■□□□□ 0.61
ECHDC1-214ENST00000474289 GOLGA8TH3BQL2 631 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 OGTO15294 1046 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 CILPO75339 1184 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 TOMM70O94826 608 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 TNNC2P02585 160 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 CHRNA5P30532 468 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 SDC4P31431 198 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 GRIA3P42263 894 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 GLRBP48167 497 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 PGGT1BP53609 377 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 TNK2Q07912 1038 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 PPIL2Q13356 520 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 SEPT6Q14141 434 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 NEDD8Q15843 81 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 INTS11Q5TA45 600 aaKnown RBP18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 IGFN1Q86VF2 1251 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 ZNF669Q96BR6 464 aaPredicted RBP18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 MAELQ96JY0 434 aaKnown RBP18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 ARMC1Q9NVT9 282 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 TMEM9Q9P0T7 183 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 GMPR2Q9P2T1 348 aaKnown RBP18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 HESX1Q9UBX0 185 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 B3GNT3Q9Y2A9 372 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 IQCA1LA6NCM1 817 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 SDHDO14521 159 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 NRP1O14786 923 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 MSCO60682 206 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 RAD17O75943 681 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 ASNSP08243 561 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 CCNA2P20248 432 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 PSMB4P28070 264 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 OSTNP61366 133 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 STX5Q13190 355 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 DHFR2Q86XF0 187 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 OFCC1Q8IZS5 231 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 PELI3Q8N2H9 469 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 KDM1BQ8NB78 822 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 PCYOX1LQ8NBM8 494 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 CCDC97Q96F63 343 aaPredicted RBP18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 ANKRD36BP1Q96IX9 119 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 HEXIM2Q96MH2 286 aaKnown RBP18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 ATAD3AQ9NVI7 634 aa18.85■□□□□ 0.61
ECHDC1-214ENST00000474289 C1orf232A0A0U1RR37 186 aa18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 FAM149AA5PLN7 773 aa18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 ZNF487B1APH4 448 aa18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 DPYSL4O14531 572 aa18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 MAFGO15525 162 aa18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 AQP9O43315 295 aa18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 CABYRO75952 493 aa18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 ARSAP15289 507 aa18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 CYP3A5P20815 502 aa18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 JAK1P23458 1154 aa18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 MAP4P27816 1152 aaKnown RBP18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 RGS7P49802 495 aa18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 DPYSL2Q16555 572 aa18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 TRIM16LQ309B1 348 aa18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 NCBP2-AS2Q69YL0 99 aa18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 CHST15Q7LFX5 561 aaPredicted RBP18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 NETO2Q8NC67 525 aa18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 CYGBQ8WWM9 190 aa18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 UPF3AQ9H1J1 476 aaKnown RBP18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 SIX4Q9UIU6 781 aa18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 NOL3O60936 208 aaKnown RBP18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 APOA4P06727 396 aa18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 SUPT20HL2P0C7V6 817 aa18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 ATP6V1B2P21281 511 aa18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 MLLT10P55197 1068 aa18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 SURF1Q15526 300 aa18.84■□□□□ 0.61
ECHDC1-214ENST00000474289 SUPT20HL1Q3ZLR7 823 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms