RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 EME2A4GXA9 379 aaPredicted RBP5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 POM121BA6NF01 834 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 KPNA3O00505 521 aaPredicted RBP5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 CETN3O15182 167 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 RAD51BO15315 384 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 SLC16A3O15427 465 aaKnown RBP5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 AQP9O43315 295 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 BNIP3LO60238 219 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 TNFSF15O95150 251 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 TRUB2O95900 331 aaKnown RBP5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 MT-CO1P00395 513 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 CSF2P04141 144 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 CENPBP07199 599 aaPredicted RBP5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 ITGA2BP08514 1039 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 SRCP12931 536 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 ZNF18P17022 549 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 CHRNA3P32297 505 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 GPD2P43304 727 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 SYKP43405 635 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 NDUFA8P51970 172 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 NUCB2P80303 420 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 NFKB2Q00653 900 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 DNM1Q05193 864 aaKnown RBP5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 LRMPQ12912 555 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 PKP1Q13835 747 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 FGL2Q14314 439 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 DRAP1Q14919 205 aaPredicted RBP5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 NR0B2Q15466 257 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 DEFB133Q30KQ1 61 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 ZSCAN23Q3MJ62 389 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 LINC00303Q3SY05 128 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 RABGAP1LQ5R372 815 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 PERM1Q5SV97 790 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 TPRG1LQ5T0D9 272 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 FBXL22Q6P050 247 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 CRTC1Q6UUV9 634 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 ERN2Q76MJ5 926 aaKnown RBP5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 DCP2Q8IU60 420 aaKnown RBP5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 SLC35F3Q8IY50 421 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 ARL14Q8N4G2 192 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 ATP6V0D2Q8N8Y2 350 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 TMIEQ8NEW7 156 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 OR2A12Q8NGT7 310 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 TPCN2Q8NHX9 752 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 WDR36Q8NI36 951 aaKnown RBP5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 FAM174AQ8TBP5 190 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 KAT5Q92993 513 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 SLC35C1Q96A29 364 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 CCDC47Q96A33 483 aaKnown RBP5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 RPRD1AQ96P16 312 aaPredicted RBP5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 CCNL2Q96S94 520 aaPredicted RBP5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 TRIM62Q9BVG3 475 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 REPIN1Q9BWE0 567 aaKnown RBP5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 BOCQ9BWV1 1114 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 HDAC8Q9BY41 377 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 POPDC2Q9HBU9 364 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 ST7Q9NRC1 585 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 NCKIPSDQ9NZQ3 722 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 SALL4Q9UJQ4 1053 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 VPS28Q9UK41 221 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 HS3ST2Q9Y278 367 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 PCDHB4Q9Y5E5 795 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 HS3ST3A1Q9Y663 406 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 CSNK1G3Q9Y6M4 447 aa5.25□□□□□ -1.57
SNRNP40-204ENST00000474025 TRPM6Q9BX84 2022 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 CCDC187A0A096LP49 1063 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 TTC24A2A3L6 582 aaPredicted RBP5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 E5RJQ4 531 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 LMO7DNF2Z398 122 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 H3BM21 787 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 K7ERQ8 282 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 TPP1O14773 563 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 PLD2O14939 933 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 MUSKO15146 869 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 PMM2O15305 246 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 SPINT1O43278 529 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 SUV39H1O43463 412 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 SMAD6O43541 496 aaKnown RBP5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 NOBOXO60393 691 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 SNAP91O60641 907 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 CLDN11O75508 207 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 ZNF821O75541 412 aaPredicted RBP5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 GCATO75600 419 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 PCDH8O95206 1070 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 AFPP02771 609 aaKnown RBP5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 PRNPP04156 253 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 ITGB2P05107 769 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 SLC2A3P11169 496 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 JUNDP17535 347 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 ITGB6P18564 788 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 RRM1P23921 792 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 CCR1P32246 355 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 ACADSBP45954 432 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 RABIFP47224 123 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 FMO5P49326 533 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 PMS1P54277 932 aaKnown RBP5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 YWHAZP63104 245 aaKnown RBP5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 RPS21P63220 83 aaKnown RBP5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 CCDC15Q0P6D6 951 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms