RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 C19orf48Q6RUI8 117 aa17.85■□□□□ 0.45
COL7A1-206ENST00000466591 SLFN11Q7Z7L1 901 aa17.85■□□□□ 0.45
COL7A1-206ENST00000466591 PAF1Q8N7H5 531 aa17.85■□□□□ 0.45
COL7A1-206ENST00000466591 OR6K2Q8NGY2 324 aa17.85■□□□□ 0.45
COL7A1-206ENST00000466591 NXPE2Q96DL1 559 aa17.85■□□□□ 0.45
COL7A1-206ENST00000466591 RETREG1Q9H6L5 497 aa17.85■□□□□ 0.45
COL7A1-206ENST00000466591 AK5Q9Y6K8 562 aa17.85■□□□□ 0.45
COL7A1-206ENST00000466591 FRYQ5TBA9 3013 aa17.85■□□□□ 0.45
COL7A1-206ENST00000466591 IGF2RP11717 2491 aa17.84■□□□□ 0.45
COL7A1-206ENST00000466591 H3BM21 787 aa17.84■□□□□ 0.45
COL7A1-206ENST00000466591 EPHB6O15197 1021 aa17.84■□□□□ 0.45
COL7A1-206ENST00000466591 BUB1O43683 1085 aa17.84■□□□□ 0.45
COL7A1-206ENST00000466591 CREB3O43889 395 aa17.84■□□□□ 0.45
COL7A1-206ENST00000466591 CKMT2P17540 419 aa17.84■□□□□ 0.45
COL7A1-206ENST00000466591 CHRNB2P17787 502 aa17.84■□□□□ 0.45
COL7A1-206ENST00000466591 XPAP23025 273 aaPredicted RBP17.84■□□□□ 0.45
COL7A1-206ENST00000466591 EPHB2P29323 1055 aa17.84■□□□□ 0.45
COL7A1-206ENST00000466591 L1CAMP32004 1257 aa17.84■□□□□ 0.45
COL7A1-206ENST00000466591 CLDN2P57739 230 aa17.84■□□□□ 0.45
COL7A1-206ENST00000466591 ZNF284Q2VY69 593 aa17.84■□□□□ 0.45
COL7A1-206ENST00000466591 SEL1L3Q68CR1 1132 aa17.84■□□□□ 0.45
COL7A1-206ENST00000466591 LEKR1Q6ZMV7 388 aa17.84■□□□□ 0.45
COL7A1-206ENST00000466591 CLEC17AQ6ZS10 378 aa17.84■□□□□ 0.45
COL7A1-206ENST00000466591 CCDC185Q8N715 623 aa17.84■□□□□ 0.45
COL7A1-206ENST00000466591 C3orf20Q8ND61 904 aa17.84■□□□□ 0.45
COL7A1-206ENST00000466591 FAM174AQ8TBP5 190 aa17.84■□□□□ 0.45
COL7A1-206ENST00000466591 ARHGEF26Q96DR7 871 aa17.84■□□□□ 0.45
COL7A1-206ENST00000466591 EPAS1Q99814 870 aa17.84■□□□□ 0.45
COL7A1-206ENST00000466591 NCAPGQ9BPX3 1015 aa17.84■□□□□ 0.45
COL7A1-206ENST00000466591 OSBPL2Q9H1P3 480 aa17.84■□□□□ 0.45
COL7A1-206ENST00000466591 MAGEH1Q9H213 219 aa17.84■□□□□ 0.45
COL7A1-206ENST00000466591 TMEM248Q9NWD8 314 aa17.84■□□□□ 0.45
COL7A1-206ENST00000466591 DNAJC28Q9NX36 388 aa17.84■□□□□ 0.45
COL7A1-206ENST00000466591 LIMA1Q9UHB6 759 aaKnown RBP17.84■□□□□ 0.45
COL7A1-206ENST00000466591 SIK3Q9Y2K2 1263 aa17.84■□□□□ 0.45
COL7A1-206ENST00000466591 RAXQ9Y2V3 346 aa17.84■□□□□ 0.45
COL7A1-206ENST00000466591 NEMP2A6NFY4 417 aa17.83■□□□□ 0.44
COL7A1-206ENST00000466591 ZSCAN5CA6NGD5 496 aaPredicted RBP17.83■□□□□ 0.44
COL7A1-206ENST00000466591 FPGTO14772 594 aa17.83■□□□□ 0.44
COL7A1-206ENST00000466591 LRIG2O94898 1065 aa17.83■□□□□ 0.44
COL7A1-206ENST00000466591 DKK1O94907 266 aa17.83■□□□□ 0.44
COL7A1-206ENST00000466591 FERP16591 822 aa17.83■□□□□ 0.44
COL7A1-206ENST00000466591 RFC1P35251 1148 aaPredicted RBP17.83■□□□□ 0.44
COL7A1-206ENST00000466591 ACADVLP49748 655 aa17.83■□□□□ 0.44
COL7A1-206ENST00000466591 ILKQ13418 452 aa17.83■□□□□ 0.44
COL7A1-206ENST00000466591 FILIP1LQ4L180 1135 aa17.83■□□□□ 0.44
COL7A1-206ENST00000466591 CCDC183Q5T5S1 534 aa17.83■□□□□ 0.44
COL7A1-206ENST00000466591 CFAP58Q5T655 872 aa17.83■□□□□ 0.44
COL7A1-206ENST00000466591 HES3Q5TGS1 186 aa17.83■□□□□ 0.44
COL7A1-206ENST00000466591 ZSCAN30Q86W11 494 aa17.83■□□□□ 0.44
COL7A1-206ENST00000466591 OR13H1Q8NG92 308 aa17.83■□□□□ 0.44
COL7A1-206ENST00000466591 ARHGEF2Q92974 986 aaKnown RBP17.83■□□□□ 0.44
COL7A1-206ENST00000466591 LRIG1Q96JA1 1093 aa17.83■□□□□ 0.44
COL7A1-206ENST00000466591 GDAP1L1Q96MZ0 367 aa17.83■□□□□ 0.44
COL7A1-206ENST00000466591 DCBLD2Q96PD2 775 aa17.83■□□□□ 0.44
COL7A1-206ENST00000466591 MCEEQ96PE7 176 aa17.83■□□□□ 0.44
COL7A1-206ENST00000466591 AGPAT1Q99943 283 aa17.83■□□□□ 0.44
COL7A1-206ENST00000466591 OSBPL1AQ9BXW6 950 aa17.83■□□□□ 0.44
COL7A1-206ENST00000466591 SLC17A9Q9BYT1 436 aa17.83■□□□□ 0.44
COL7A1-206ENST00000466591 CATSPERBQ9H7T0 1116 aa17.83■□□□□ 0.44
COL7A1-206ENST00000466591 KLHL11Q9NVR0 708 aa17.83■□□□□ 0.44
COL7A1-206ENST00000466591 WASF2Q9Y6W5 498 aa17.83■□□□□ 0.44
COL7A1-206ENST00000466591 TAF4O00268 1085 aa17.82■□□□□ 0.44
COL7A1-206ENST00000466591 ZMPSTE24O75844 475 aa17.82■□□□□ 0.44
COL7A1-206ENST00000466591 IGSF6O95976 241 aa17.82■□□□□ 0.44
COL7A1-206ENST00000466591 PAK4O96013 591 aaPredicted RBP17.82■□□□□ 0.44
COL7A1-206ENST00000466591 UGT2B4P06133 528 aa17.82■□□□□ 0.44
COL7A1-206ENST00000466591 UNGP13051 313 aaPredicted RBP17.82■□□□□ 0.44
COL7A1-206ENST00000466591 TNFAIP3P21580 790 aa17.82■□□□□ 0.44
COL7A1-206ENST00000466591 HDAC4P56524 1084 aa17.82■□□□□ 0.44
COL7A1-206ENST00000466591 NRG1Q02297 640 aaPredicted RBP17.82■□□□□ 0.44
COL7A1-206ENST00000466591 RAB6CQ53S08 254 aa17.82■□□□□ 0.44
COL7A1-206ENST00000466591 WDR59Q6PJI9 974 aa17.82■□□□□ 0.44
COL7A1-206ENST00000466591 Q6ZSR6 202 aa17.82■□□□□ 0.44
COL7A1-206ENST00000466591 PARS2Q7L3T8 475 aaKnown RBP17.82■□□□□ 0.44
COL7A1-206ENST00000466591 BNIPLQ7Z465 357 aa17.82■□□□□ 0.44
COL7A1-206ENST00000466591 PHF13Q86YI8 300 aaPredicted RBP17.82■□□□□ 0.44
COL7A1-206ENST00000466591 DCP2Q8IU60 420 aaKnown RBP17.82■□□□□ 0.44
COL7A1-206ENST00000466591 AOPEPQ8N6M6 819 aa17.82■□□□□ 0.44
COL7A1-206ENST00000466591 TMEM145Q8NBT3 493 aa17.82■□□□□ 0.44
COL7A1-206ENST00000466591 OR2AP1Q8NGE2 309 aa17.82■□□□□ 0.44
COL7A1-206ENST00000466591 HNRNPLLQ8WVV9 542 aaKnown RBP17.82■□□□□ 0.44
COL7A1-206ENST00000466591 NTAN1Q96AB6 310 aa17.82■□□□□ 0.44
COL7A1-206ENST00000466591 RAB7BQ96AH8 199 aa17.82■□□□□ 0.44
COL7A1-206ENST00000466591 ISG20Q96AZ6 181 aaKnown RBP17.82■□□□□ 0.44
COL7A1-206ENST00000466591 PCDHB18PQ96TA0 734 aa17.82■□□□□ 0.44
COL7A1-206ENST00000466591 RAB6CQ9H0N0 254 aa17.82■□□□□ 0.44
COL7A1-206ENST00000466591 DONSONQ9NYP3 566 aa17.82■□□□□ 0.44
COL7A1-206ENST00000466591 ACTL7AQ9Y615 435 aa17.82■□□□□ 0.44
COL7A1-206ENST00000466591 COL5A1P20908 1838 aaPredicted RBP17.82■□□□□ 0.44
COL7A1-206ENST00000466591 PTPRBP23467 1997 aa17.81■□□□□ 0.44
COL7A1-206ENST00000466591 SIGLEC16A6NMB1 481 aa17.81■□□□□ 0.44
COL7A1-206ENST00000466591 C16orf96A6NNT2 1141 aa17.81■□□□□ 0.44
COL7A1-206ENST00000466591 FAM72CH0Y354 149 aa17.81■□□□□ 0.44
COL7A1-206ENST00000466591 TSPAN6O43657 245 aa17.81■□□□□ 0.44
COL7A1-206ENST00000466591 SIGLEC6O43699 453 aa17.81■□□□□ 0.44
COL7A1-206ENST00000466591 POP4O95707 220 aaKnown RBP17.81■□□□□ 0.44
COL7A1-206ENST00000466591 GSRP00390 522 aa17.81■□□□□ 0.44
COL7A1-206ENST00000466591 RHOAP61586 193 aa17.81■□□□□ 0.44
COL7A1-206ENST00000466591 C1QBPQ07021 282 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms