RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 HS3ST4Q9Y661 456 aa14.78□□□□□ -0.04
SMC1A-204ENST00000463684 RNF103O00237 685 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 TERTO14746 1132 aaKnown RBP14.77□□□□□ -0.05
SMC1A-204ENST00000463684 PLD2O14939 933 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 RAD51BO15315 384 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 P4HA2O15460 535 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 SMAD6O43541 496 aaKnown RBP14.77□□□□□ -0.05
SMC1A-204ENST00000463684 PAGE1O75459 146 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 ENDOD1O94919 500 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 ITGB2P05107 769 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 ANXA6P08133 673 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 ADRB3P13945 408 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 SLC5A2P31639 672 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 L1CAMP32004 1257 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 PMS1P54277 932 aaKnown RBP14.77□□□□□ -0.05
SMC1A-204ENST00000463684 ADKP55263 362 aaKnown RBP14.77□□□□□ -0.05
SMC1A-204ENST00000463684 EIF3IQ13347 325 aaKnown RBP14.77□□□□□ -0.05
SMC1A-204ENST00000463684 PTK2BQ14289 1009 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 DRAP1Q14919 205 aaPredicted RBP14.77□□□□□ -0.05
SMC1A-204ENST00000463684 CCDC40Q4G0X9 1142 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 COBLL1Q53SF7 1204 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 COLEC12Q5KU26 742 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 C22orf39Q6P5X5 142 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 LINGO4Q6UY18 593 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 DPY19L3Q6ZPD9 716 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 C14orf80Q86SX3 495 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 JAMLQ86YT9 394 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 ARHGEF19Q8IW93 802 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 FBXO39Q8N4B4 442 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 EHBP1Q8NDI1 1231 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 LMO3Q8TAP4 145 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 ZNF606Q8WXB4 792 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 EXTL1Q92935 676 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 SNX21Q969T3 373 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 LIN37Q96GY3 246 aaPredicted RBP14.77□□□□□ -0.05
SMC1A-204ENST00000463684 SLC2A13Q96QE2 648 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 STARD5Q9NSY2 213 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 APOBEC3BQ9UH17 382 aaKnown RBP14.77□□□□□ -0.05
SMC1A-204ENST00000463684 PADI4Q9UM07 663 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 PCDHGA7Q9Y5G6 932 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 FADS3Q9Y5Q0 445 aa14.77□□□□□ -0.05
SMC1A-204ENST00000463684 TRIM49BA6NDI0 452 aa14.76□□□□□ -0.05
SMC1A-204ENST00000463684 TMX2-CTNND1H3BSU7 103 aa14.76□□□□□ -0.05
SMC1A-204ENST00000463684 NEMP1O14524 444 aa14.76□□□□□ -0.05
SMC1A-204ENST00000463684 THAP12O43422 761 aa14.76□□□□□ -0.05
SMC1A-204ENST00000463684 AP1G1O43747 822 aa14.76□□□□□ -0.05
SMC1A-204ENST00000463684 HSF2BPO75031 334 aa14.76□□□□□ -0.05
SMC1A-204ENST00000463684 CNTN5O94779 1100 aa14.76□□□□□ -0.05
SMC1A-204ENST00000463684 ITGB7P26010 798 aa14.76□□□□□ -0.05
SMC1A-204ENST00000463684 GGCXP38435 758 aa14.76□□□□□ -0.05
SMC1A-204ENST00000463684 DNA2P51530 1060 aa14.76□□□□□ -0.05
SMC1A-204ENST00000463684 THOP1P52888 689 aa14.76□□□□□ -0.05
SMC1A-204ENST00000463684 EIF2B5Q13144 721 aaKnown RBP14.76□□□□□ -0.05
SMC1A-204ENST00000463684 C1orf61Q13536 156 aa14.76□□□□□ -0.05
SMC1A-204ENST00000463684 C5orf22Q49AR2 442 aa14.76□□□□□ -0.05
SMC1A-204ENST00000463684 PRRT3Q5FWE3 981 aa14.76□□□□□ -0.05
SMC1A-204ENST00000463684 ZNF574Q6ZN55 896 aaPredicted RBP14.76□□□□□ -0.05
SMC1A-204ENST00000463684 RAB11FIP2Q7L804 512 aa14.76□□□□□ -0.05
SMC1A-204ENST00000463684 SETD3Q86TU7 594 aaPredicted RBP14.76□□□□□ -0.05
SMC1A-204ENST00000463684 SLC35F3Q8IY50 421 aa14.76□□□□□ -0.05
SMC1A-204ENST00000463684 DCAF4L2Q8NA75 395 aa14.76□□□□□ -0.05
SMC1A-204ENST00000463684 HEPHQ9BQS7 1158 aa14.76□□□□□ -0.05
SMC1A-204ENST00000463684 SLC13A1Q9BZW2 595 aa14.76□□□□□ -0.05
SMC1A-204ENST00000463684 STRADBQ9C0K7 418 aa14.76□□□□□ -0.05
SMC1A-204ENST00000463684 EPB41L5Q9HCM4 733 aa14.76□□□□□ -0.05
SMC1A-204ENST00000463684 ASNSD1Q9NWL6 643 aa14.76□□□□□ -0.05
SMC1A-204ENST00000463684 SEPT10Q9P0V9 454 aa14.76□□□□□ -0.05
SMC1A-204ENST00000463684 CNTN6Q9UQ52 1028 aa14.76□□□□□ -0.05
SMC1A-204ENST00000463684 PIEZO2Q9H5I5 2752 aa14.76□□□□□ -0.05
SMC1A-204ENST00000463684 A0A1W2PQ27 194 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 A0A1W2PQ64 194 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 IGLON5A6NGN9 336 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 LMO7DNF2Z398 122 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 M0QYT0 321 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 SPINT1O43278 529 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 SUV39H1O43463 412 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 TSPAN6O43657 245 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 GCATO75600 419 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 GRAP2O75791 330 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 ADCY5O95622 1261 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 PFN3P60673 137 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 NFKB2Q00653 900 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 PDCLQ13371 301 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 PNOCQ13519 176 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 FAXCQ5TGI0 409 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 RETSATQ6NUM9 610 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 LRRC31Q6UY01 552 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 HSCBQ8IWL3 235 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 RBFAQ8N0V3 343 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 ZSCAN1Q8NBB4 408 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 SCG3Q8WXD2 468 aaKnown RBP14.75□□□□□ -0.05
SMC1A-204ENST00000463684 TBATAQ96M53 351 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 CEP63Q96MT8 703 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 KREMEN1Q96MU8 473 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 GSDMAQ96QA5 445 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 KLF6Q99612 283 aaPredicted RBP14.75□□□□□ -0.05
SMC1A-204ENST00000463684 C1QTNF2Q9BXJ5 285 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 GTPBP4Q9BZE4 634 aaKnown RBP14.75□□□□□ -0.05
SMC1A-204ENST00000463684 GOLPH3LQ9H4A5 285 aa14.75□□□□□ -0.05
SMC1A-204ENST00000463684 WDCPQ9H6R7 721 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms