RNA–Protein interactions for RNA: ENST00000463632.1

RPA3-206, Transcript of replication protein A3, humanhuman

TSL 5

Gene RPA3, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-206ENST00000463632 DCP2Q8IU60 420 aaKnown RBP12.56□□□□□ -0.4
RPA3-206ENST00000463632 EMC1Q8N766 993 aa12.56□□□□□ -0.4
RPA3-206ENST00000463632 LMX1AQ8TE12 382 aa12.56□□□□□ -0.4
RPA3-206ENST00000463632 SLC39A7Q92504 469 aa12.56□□□□□ -0.4
RPA3-206ENST00000463632 PGAP3Q96FM1 320 aaPredicted RBP12.56□□□□□ -0.4
RPA3-206ENST00000463632 APOLD1Q96LR9 279 aa12.56□□□□□ -0.4
RPA3-206ENST00000463632 DEPDC7Q96QD5 511 aa12.56□□□□□ -0.4
RPA3-206ENST00000463632 HAPLN3Q96S86 360 aa12.56□□□□□ -0.4
RPA3-206ENST00000463632 DUSP23Q9BVJ7 150 aa12.56□□□□□ -0.4
RPA3-206ENST00000463632 CEP44Q9C0F1 390 aa12.56□□□□□ -0.4
RPA3-206ENST00000463632 DNAI1Q9UI46 699 aa12.56□□□□□ -0.4
RPA3-206ENST00000463632 PCDHB1Q9Y5F3 818 aa12.56□□□□□ -0.4
RPA3-206ENST00000463632 ACTL7AQ9Y615 435 aa12.56□□□□□ -0.4
RPA3-206ENST00000463632 ASPMQ8IZT6 3477 aa12.56□□□□□ -0.4
RPA3-206ENST00000463632 ACACAQ13085 2346 aa12.56□□□□□ -0.4
RPA3-206ENST00000463632 POM121BA6NF01 834 aa12.55□□□□□ -0.4
RPA3-206ENST00000463632 IGLON5A6NGN9 336 aa12.55□□□□□ -0.4
RPA3-206ENST00000463632 I6L893 689 aaPredicted RBP12.55□□□□□ -0.4
RPA3-206ENST00000463632 USP12O75317 370 aa12.55□□□□□ -0.4
RPA3-206ENST00000463632 GFPT2O94808 682 aa12.55□□□□□ -0.4
RPA3-206ENST00000463632 LSM8O95777 96 aaKnown RBP12.55□□□□□ -0.4
RPA3-206ENST00000463632 ITGB7P26010 798 aa12.55□□□□□ -0.4
RPA3-206ENST00000463632 SDC4P31431 198 aa12.55□□□□□ -0.4
RPA3-206ENST00000463632 GKP32189 559 aa12.55□□□□□ -0.4
RPA3-206ENST00000463632 ACVRL1P37023 503 aa12.55□□□□□ -0.4
RPA3-206ENST00000463632 SCNN1AP37088 669 aa12.55□□□□□ -0.4
RPA3-206ENST00000463632 ETFBP38117 255 aa12.55□□□□□ -0.4
RPA3-206ENST00000463632 GABREP78334 506 aa12.55□□□□□ -0.4
RPA3-206ENST00000463632 PDE1CQ14123 709 aaPredicted RBP12.55□□□□□ -0.4
RPA3-206ENST00000463632 CDKN3Q16667 212 aa12.55□□□□□ -0.4
RPA3-206ENST00000463632 DPCR1Q3MIW9 517 aa12.55□□□□□ -0.4
RPA3-206ENST00000463632 BROXQ5VW32 411 aa12.55□□□□□ -0.4
RPA3-206ENST00000463632 KIAA1161Q6NSJ0 714 aa12.55□□□□□ -0.4
RPA3-206ENST00000463632 FOXR1Q6PIV2 292 aa12.55□□□□□ -0.4
RPA3-206ENST00000463632 ZNF783Q6ZMS7 281 aa12.55□□□□□ -0.4
RPA3-206ENST00000463632 GPR155Q7Z3F1 870 aa12.55□□□□□ -0.4
RPA3-206ENST00000463632 ABI3BPQ7Z7G0 1075 aa12.55□□□□□ -0.4
RPA3-206ENST00000463632 NOP9Q86U38 636 aaKnown RBP12.55□□□□□ -0.4
RPA3-206ENST00000463632 ZNF683Q8IZ20 524 aa12.55□□□□□ -0.4
RPA3-206ENST00000463632 DCBLD1Q8N8Z6 715 aa12.55□□□□□ -0.4
RPA3-206ENST00000463632 FAM174AQ8TBP5 190 aa12.55□□□□□ -0.4
RPA3-206ENST00000463632 IFI44Q8TCB0 444 aa12.55□□□□□ -0.4
RPA3-206ENST00000463632 PCMTD1Q96MG8 357 aaPredicted RBP12.55□□□□□ -0.4
RPA3-206ENST00000463632 TAB2Q9NYJ8 693 aa12.55□□□□□ -0.4
RPA3-206ENST00000463632 NLGN3Q9NZ94 848 aa12.55□□□□□ -0.4
RPA3-206ENST00000463632 FADS3Q9Y5Q0 445 aa12.55□□□□□ -0.4
RPA3-206ENST00000463632 WASF2Q9Y6W5 498 aa12.55□□□□□ -0.4
RPA3-206ENST00000463632 ANKRD11Q6UB99 2663 aaPredicted RBP12.55□□□□□ -0.4
RPA3-206ENST00000463632 FREM2Q5SZK8 3169 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 IGLV3-10A0A075B6K4 115 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 K7ESM1 405 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 SCAMP1O15126 338 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 RAD51BO15315 384 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 CSO75390 466 aaKnown RBP12.54□□□□□ -0.4
RPA3-206ENST00000463632 CKMT1AP12532 417 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 UCHL3P15374 230 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 JUNDP17535 347 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 XPAP23025 273 aaPredicted RBP12.54□□□□□ -0.4
RPA3-206ENST00000463632 CDH5P33151 784 aaPredicted RBP12.54□□□□□ -0.4
RPA3-206ENST00000463632 RABIFP47224 123 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 GABRB2P47870 512 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 THOP1P52888 689 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 GEMIN4P57678 1058 aaKnown RBP12.54□□□□□ -0.4
RPA3-206ENST00000463632 C15orf59Q2T9L4 293 aaPredicted RBP12.54□□□□□ -0.4
RPA3-206ENST00000463632 DEFB133Q30KQ1 61 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 TBC1D25Q3MII6 688 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 TMEM259Q4ZIN3 620 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 TAF1BQ53T94 588 aaPredicted RBP12.54□□□□□ -0.4
RPA3-206ENST00000463632 KYAT3Q6YP21 454 aaKnown RBP12.54□□□□□ -0.4
RPA3-206ENST00000463632 PARS2Q7L3T8 475 aaKnown RBP12.54□□□□□ -0.4
RPA3-206ENST00000463632 PARGQ86W56 976 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 SLC22A18ASQ8N1D0 253 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 PAF1Q8N7H5 531 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 SNIP1Q8TAD8 396 aaKnown RBP12.54□□□□□ -0.4
RPA3-206ENST00000463632 RXFP2Q8WXD0 754 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 RFFLQ8WZ73 363 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 NT5C3BQ969T7 300 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 BMFQ96LC9 184 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 IL12RB2Q99665 862 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 STK33Q9BYT3 514 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 SEPT11Q9NVA2 429 aaKnown RBP12.54□□□□□ -0.4
RPA3-206ENST00000463632 OR12D3Q9UGF7 316 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 DOLKQ9UPQ8 538 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 ITM2BQ9Y287 266 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 HS3ST3A1Q9Y663 406 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 ADAMTS20P59510 1910 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 PLXNB3Q9ULL4 1909 aa12.54□□□□□ -0.4
RPA3-206ENST00000463632 DSPP15924 2871 aaKnown RBP12.54□□□□□ -0.4
RPA3-206ENST00000463632 C16orf96A6NNT2 1141 aa12.53□□□□□ -0.4
RPA3-206ENST00000463632 AQP9O43315 295 aa12.53□□□□□ -0.4
RPA3-206ENST00000463632 TSPAN6O43657 245 aa12.53□□□□□ -0.4
RPA3-206ENST00000463632 BUB1O43683 1085 aa12.53□□□□□ -0.4
RPA3-206ENST00000463632 RAMP2O60895 175 aa12.53□□□□□ -0.4
RPA3-206ENST00000463632 ZIC2O95409 532 aaPredicted RBP12.53□□□□□ -0.4
RPA3-206ENST00000463632 UGT2B4P06133 528 aa12.53□□□□□ -0.4
RPA3-206ENST00000463632 ERCC5P28715 1186 aaPredicted RBP12.53□□□□□ -0.4
RPA3-206ENST00000463632 RBMS1P29558 406 aaKnown RBP12.53□□□□□ -0.4
RPA3-206ENST00000463632 PCBP4P57723 403 aaKnown RBP12.53□□□□□ -0.4
RPA3-206ENST00000463632 SNRPD1P62314 119 aaKnown RBP12.53□□□□□ -0.4
RPA3-206ENST00000463632 NOMO3P69849 1222 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms