RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 USP8P40818 1118 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 MYL6P60660 151 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 HHEXQ03014 270 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 EFEMP1Q12805 493 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 LPIN1Q14693 890 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 TMEM132DQ14C87 1099 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 SPA17Q15506 151 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 PTPN14Q15678 1187 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 SGSM1Q2NKQ1 1148 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 ASTE1Q2TB18 679 aaPredicted RBP7.75□□□□□ -1.17
UBE4B-204ENST00000462658 SPOPLQ6IQ16 392 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 MFSD5Q6N075 450 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 ALKAL1Q6UXT8 129 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 ZNF572Q7Z3I7 529 aaPredicted RBP7.75□□□□□ -1.17
UBE4B-204ENST00000462658 ZNF571Q7Z3V5 609 aaPredicted RBP7.75□□□□□ -1.17
UBE4B-204ENST00000462658 FAM71AQ8IYT1 594 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 USP38Q8NB14 1042 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 SLC35B2Q8TB61 432 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 SHC3Q92529 594 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 SNX27Q96L92 541 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.75□□□□□ -1.17
UBE4B-204ENST00000462658 APOL6Q9BWW8 343 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 KRTAP3-1Q9BYR8 98 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 KCNH6Q9H252 994 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 NXF3Q9H4D5 531 aaKnown RBP7.75□□□□□ -1.17
UBE4B-204ENST00000462658 APOBEC3GQ9HC16 384 aaKnown RBP7.75□□□□□ -1.17
UBE4B-204ENST00000462658 ERVK-5Q9HDB9 667 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 PADI3Q9ULW8 664 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 DERAQ9Y315 318 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 C2CD2Q9Y426 696 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 ACTL7AQ9Y615 435 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 SQORQ9Y6N5 450 aa7.75□□□□□ -1.17
UBE4B-204ENST00000462658 E2F8A0AVK6 867 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 ZNF263O14978 683 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 RECQL4O94761 1208 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 LCA5LO95447 670 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 CD4P01730 458 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 ALOX15P16050 662 aaPredicted RBP7.74□□□□□ -1.17
UBE4B-204ENST00000462658 TBXAS1P24557 533 aaPredicted RBP7.74□□□□□ -1.17
UBE4B-204ENST00000462658 ANXA13P27216 316 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 ATICP31939 592 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 SELENOPP49908 381 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 NOP14P78316 857 aaKnown RBP7.74□□□□□ -1.17
UBE4B-204ENST00000462658 RBP5P82980 135 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 GFPT1Q06210 699 aaPredicted RBP7.74□□□□□ -1.17
UBE4B-204ENST00000462658 TARDBPQ13148 414 aaKnown RBP eCLIP7.74□□□□□ -1.17
UBE4B-204ENST00000462658 CUL2Q13617 745 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 ZBTB6Q15916 424 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 SLC18A3Q16572 532 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 NFE2Q16621 373 aaPredicted RBP7.74□□□□□ -1.17
UBE4B-204ENST00000462658 ZNF699Q32M78 642 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 DNTTIP2Q5QJE6 756 aaKnown RBP7.74□□□□□ -1.17
UBE4B-204ENST00000462658 Q6ZRM9 215 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 VPS36Q86VN1 386 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 HACE1Q8IYU2 909 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 BEST2Q8NFU1 509 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 CAGE1Q8TC20 777 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 U2AF1L4Q8WU68 220 aaKnown RBP7.74□□□□□ -1.17
UBE4B-204ENST00000462658 ST8SIA2Q92186 375 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 TAF4BQ92750 862 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 JAKMIP2Q96AA8 810 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 MIEF2Q96C03 454 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 PGBD4Q96DM1 585 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 C16orf45Q96MC5 204 aaPredicted RBP7.74□□□□□ -1.17
UBE4B-204ENST00000462658 TSPAN18Q96SJ8 248 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 CPEB1Q9BZB8 566 aaKnown RBP7.74□□□□□ -1.17
UBE4B-204ENST00000462658 CXCL16Q9H2A7 254 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 MANSC1Q9H8J5 431 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 DPP3Q9NY33 737 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 SIX4Q9UIU6 781 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 ITGA11Q9UKX5 1188 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 RUVBL1Q9Y265 456 aaKnown RBP7.74□□□□□ -1.17
UBE4B-204ENST00000462658 REXO2Q9Y3B8 237 aaKnown RBP7.74□□□□□ -1.17
UBE4B-204ENST00000462658 PCDHB2Q9Y5E7 798 aa7.74□□□□□ -1.17
UBE4B-204ENST00000462658 A0A087X0T9 212 aa7.73□□□□□ -1.17
UBE4B-204ENST00000462658 A0A0U1RQJ8 604 aa7.73□□□□□ -1.17
UBE4B-204ENST00000462658 SMIM28A0A1B0GU29 152 aa7.73□□□□□ -1.17
UBE4B-204ENST00000462658 SCGB1D2O95969 90 aa7.73□□□□□ -1.17
UBE4B-204ENST00000462658 FAM228BP0C875 321 aa7.73□□□□□ -1.17
UBE4B-204ENST00000462658 RAP2AP10114 183 aa7.73□□□□□ -1.17
UBE4B-204ENST00000462658 KRT5P13647 590 aa7.73□□□□□ -1.17
UBE4B-204ENST00000462658 TNNT1P13805 278 aa7.73□□□□□ -1.17
UBE4B-204ENST00000462658 KCNE1P15382 129 aa7.73□□□□□ -1.17
UBE4B-204ENST00000462658 TNFAIP3P21580 790 aa7.73□□□□□ -1.17
UBE4B-204ENST00000462658 MAGEA1P43355 309 aa7.73□□□□□ -1.17
UBE4B-204ENST00000462658 ALDH1A3P47895 512 aa7.73□□□□□ -1.17
UBE4B-204ENST00000462658 VAV2P52735 878 aa7.73□□□□□ -1.17
UBE4B-204ENST00000462658 BFSP2Q13515 415 aa7.73□□□□□ -1.17
UBE4B-204ENST00000462658 CSRP2Q16527 193 aa7.73□□□□□ -1.17
UBE4B-204ENST00000462658 ARHGAP29Q52LW3 1261 aa7.73□□□□□ -1.17
UBE4B-204ENST00000462658 XKR4Q5GH76 650 aa7.73□□□□□ -1.17
UBE4B-204ENST00000462658 ZNF667Q5HYK9 610 aa7.73□□□□□ -1.17
UBE4B-204ENST00000462658 AFMIDQ63HM1 303 aa7.73□□□□□ -1.17
UBE4B-204ENST00000462658 SLC39A5Q6ZMH5 540 aa7.73□□□□□ -1.17
UBE4B-204ENST00000462658 MRPL10Q7Z7H8 261 aaKnown RBP7.73□□□□□ -1.17
UBE4B-204ENST00000462658 KIAA1328Q86T90 577 aa7.73□□□□□ -1.17
UBE4B-204ENST00000462658 TXLNBQ8N3L3 684 aa7.73□□□□□ -1.17
UBE4B-204ENST00000462658 MDGA1Q8NFP4 955 aa7.73□□□□□ -1.17
UBE4B-204ENST00000462658 ATXN2LQ8WWM7 1075 aaKnown RBP7.73□□□□□ -1.17
UBE4B-204ENST00000462658 ATRIPQ8WXE1 791 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms