RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 URODP06132 367 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 MMP3P08254 477 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 MYZAPP0CAP1 466 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 HOXA7P31268 230 aaPredicted RBP3.24□□□□□ -1.89
HDAC6-212ENST00000461608 PLA2G5P39877 138 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 PSMB10P40306 273 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 MLH1P40692 756 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 HARS2P49590 506 aaKnown RBP3.24□□□□□ -1.89
HDAC6-212ENST00000461608 NHLH1Q02575 133 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 ZBTB16Q05516 673 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 FOXF2Q12947 444 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 KCTD2Q14681 263 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 TAF11Q15544 211 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 GSTA3Q16772 222 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 ARL13AQ5H913 290 aaPredicted RBP3.24□□□□□ -1.89
HDAC6-212ENST00000461608 MEX3CQ5U5Q3 659 aaKnown RBP3.24□□□□□ -1.89
HDAC6-212ENST00000461608 SNX30Q5VWJ9 437 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 CDC73Q6P1J9 531 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 NCEH1Q6PIU2 408 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 CYP20A1Q6UW02 462 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 FAM57BQ71RH2 274 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 GSTA5Q7RTV2 222 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 PRSS45Q7RTY3 260 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 ARHGEF25Q86VW2 580 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 ADGRG3Q86Y34 549 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 DDIASQ8IXT1 998 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 ZDHHC23Q8IYP9 409 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 DPP10Q8N608 796 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 CCDC89Q8N998 374 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 CREB3L4Q8TEY5 395 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 MAP4K1Q92918 833 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 MAP7D2Q96T17 732 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 CLSTN3Q9BQT9 956 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 TUBB6Q9BUF5 446 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 TM2D2Q9BX73 214 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 STRA6Q9BX79 667 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 TTYH1Q9H313 450 aaPredicted RBP3.24□□□□□ -1.89
HDAC6-212ENST00000461608 EIF2B3Q9NR50 452 aaKnown RBP3.24□□□□□ -1.89
HDAC6-212ENST00000461608 TLR8Q9NR97 1041 aaKnown RBP3.24□□□□□ -1.89
HDAC6-212ENST00000461608 IL17RBQ9NRM6 502 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 HCFC1R1Q9NWW0 138 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 ZDHHC7Q9NXF8 308 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 EHD2Q9NZN4 543 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 PEMTQ9UBM1 199 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 HDAC6Q9UBN7 1215 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 LIMA1Q9UHB6 759 aaKnown RBP3.24□□□□□ -1.89
HDAC6-212ENST00000461608 VPS28Q9UK41 221 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 SLC4A4Q9Y6R1 1079 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 MST1RQ04912 1400 aa3.24□□□□□ -1.89
HDAC6-212ENST00000461608 A0A096LPK6 155 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 A0A1W2PRG0 241 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 SLC22A23A1A5C7 686 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 C17orf102A2RUQ5 167 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 PABPN1LA6NDY0 278 aaKnown RBP3.23□□□□□ -1.89
HDAC6-212ENST00000461608 LRRC53A6NM62 1247 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 PRSS47A8MTI9 375 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 FOXO6A8MYZ6 492 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 EBAG9O00559 213 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 PRPF4O43172 522 aaKnown RBP eCLIP3.23□□□□□ -1.89
HDAC6-212ENST00000461608 TMCC1O94876 653 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 TUBB4AP04350 444 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 CENPBP07199 599 aaPredicted RBP3.23□□□□□ -1.89
HDAC6-212ENST00000461608 GALTP07902 379 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 SPARCP09486 303 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 CLK3P49761 638 aaKnown RBP3.23□□□□□ -1.89
HDAC6-212ENST00000461608 RPS3AP61247 264 aaKnown RBP3.23□□□□□ -1.89
HDAC6-212ENST00000461608 OLR1P78380 273 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 PRAMEP78395 509 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 GHRHRQ02643 423 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 CYP4A11Q02928 519 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 CFHR1Q03591 330 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 AIMP2Q13155 320 aaKnown RBP3.23□□□□□ -1.89
HDAC6-212ENST00000461608 TDGQ13569 410 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 CUL4AQ13619 759 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 CRYMQ14894 314 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 HIST2H2ACQ16777 129 aaPredicted RBP3.23□□□□□ -1.89
HDAC6-212ENST00000461608 DPCR1Q3MIW9 517 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 AWAT1Q58HT5 328 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 KIAA1614Q5VZ46 1190 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 AAGABQ6PD74 315 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 DEF8Q6ZN54 512 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 CCDC129Q6ZRS4 1044 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 SLC46A3Q7Z3Q1 461 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 CCDC25Q86WR0 208 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 ADGRF4Q8IZF3 695 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 GALNT16Q8N428 558 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 PLD5Q8N7P1 536 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 ARL14EPQ8N8R7 260 aaPredicted RBP3.23□□□□□ -1.89
HDAC6-212ENST00000461608 BOLLQ8N9W6 283 aaKnown RBP3.23□□□□□ -1.89
HDAC6-212ENST00000461608 CADM4Q8NFZ8 388 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 SCFD2Q8WU76 684 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 ARHGEF2Q92974 986 aaKnown RBP3.23□□□□□ -1.89
HDAC6-212ENST00000461608 NSUN4Q96CB9 384 aaKnown RBP3.23□□□□□ -1.89
HDAC6-212ENST00000461608 ZNF333Q96JL9 665 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 KLHL15Q96M94 604 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 SDF4Q9BRK5 362 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 FRMD8Q9BZ67 464 aaPredicted RBP3.23□□□□□ -1.89
HDAC6-212ENST00000461608 HIPK3Q9H422 1215 aa3.23□□□□□ -1.89
HDAC6-212ENST00000461608 MOV10Q9HCE1 1003 aaKnown RBP3.23□□□□□ -1.89
HDAC6-212ENST00000461608 C20orf141Q9NUB4 165 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms