RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 CD207Q9UJ71 328 aa10.53□□□□□ -0.72
USP39-210ENST00000459775 PIEZO1Q92508 2521 aa10.53□□□□□ -0.72
USP39-210ENST00000459775 FGF10O15520 208 aaPredicted RBP10.52□□□□□ -0.72
USP39-210ENST00000459775 CTIFO43310 598 aaKnown RBP10.52□□□□□ -0.72
USP39-210ENST00000459775 ZFXP17010 805 aaPredicted RBP10.52□□□□□ -0.72
USP39-210ENST00000459775 GARSP41250 739 aaKnown RBP10.52□□□□□ -0.72
USP39-210ENST00000459775 CTAG1AP78358 180 aa10.52□□□□□ -0.72
USP39-210ENST00000459775 GALNT2Q10471 571 aa10.52□□□□□ -0.72
USP39-210ENST00000459775 MTM1Q13496 603 aa10.52□□□□□ -0.72
USP39-210ENST00000459775 C5orf22Q49AR2 442 aa10.52□□□□□ -0.72
USP39-210ENST00000459775 CFAP58Q5T655 872 aa10.52□□□□□ -0.72
USP39-210ENST00000459775 FYB2Q5VWT5 728 aa10.52□□□□□ -0.72
USP39-210ENST00000459775 AFMIDQ63HM1 303 aa10.52□□□□□ -0.72
USP39-210ENST00000459775 FAM217AQ8IXS0 508 aa10.52□□□□□ -0.72
USP39-210ENST00000459775 TTC13Q8NBP0 860 aa10.52□□□□□ -0.72
USP39-210ENST00000459775 TFB1MQ8WVM0 346 aaKnown RBP10.52□□□□□ -0.72
USP39-210ENST00000459775 CASKIN2Q8WXE0 1202 aa10.52□□□□□ -0.72
USP39-210ENST00000459775 IFT81Q8WYA0 676 aa10.52□□□□□ -0.72
USP39-210ENST00000459775 ZNF75CPQ92670 426 aaPredicted RBP10.52□□□□□ -0.72
USP39-210ENST00000459775 RPGRIP1Q96KN7 1286 aa10.52□□□□□ -0.72
USP39-210ENST00000459775 PWWP2AQ96N64 755 aa10.52□□□□□ -0.72
USP39-210ENST00000459775 PARD6BQ9BYG5 372 aa10.52□□□□□ -0.72
USP39-210ENST00000459775 DUS2Q9NX74 493 aaKnown RBP10.52□□□□□ -0.72
USP39-210ENST00000459775 PSD3Q9NYI0 1048 aa10.52□□□□□ -0.72
USP39-210ENST00000459775 GDE1Q9NZC3 331 aa10.52□□□□□ -0.72
USP39-210ENST00000459775 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.52□□□□□ -0.73
USP39-210ENST00000459775 POM121CA8CG34 1229 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 H0Y626 953 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 SNAP91O60641 907 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 MAFKO60675 156 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 ERLIN1O75477 346 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 GJB3O75712 270 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 KRT14P02533 472 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 ITGAVP06756 1048 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 TPP2P29144 1249 aaPredicted RBP10.52□□□□□ -0.73
USP39-210ENST00000459775 CD70P32970 193 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 RPL22P35268 128 aaKnown RBP10.52□□□□□ -0.73
USP39-210ENST00000459775 RPL21P46778 160 aaKnown RBP10.52□□□□□ -0.73
USP39-210ENST00000459775 NR2C2P49116 596 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 FNTAP49354 379 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 CARSP49589 748 aaKnown RBP10.52□□□□□ -0.73
USP39-210ENST00000459775 VSNL1P62760 191 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 GAD2Q05329 585 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 ZBTB17Q13105 803 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 ZNF177Q13360 481 aaPredicted RBP10.52□□□□□ -0.73
USP39-210ENST00000459775 POLD3Q15054 466 aaPredicted RBP10.52□□□□□ -0.73
USP39-210ENST00000459775 PRKD1Q15139 912 aaPredicted RBP10.52□□□□□ -0.73
USP39-210ENST00000459775 SLC45A4Q5BKX6 768 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 RABGAP1LQ5R372 815 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 RNF219Q5W0B1 726 aaPredicted RBP10.52□□□□□ -0.73
USP39-210ENST00000459775 C16orf54Q6UWD8 224 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 LINGO4Q6UY18 593 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 C12orf40Q86WS4 652 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 SFTPA1Q8IWL2 248 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 APCDD1Q8J025 514 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 UMODL1-AS1Q8N2C9 162 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 BPIFB1Q8TDL5 484 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 MAML1Q92585 1016 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 IRF7Q92985 503 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 RIPOR3Q96MK2 946 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 GDAP1L1Q96MZ0 367 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 QKIQ96PU8 341 aaKnown RBP eCLIP10.52□□□□□ -0.73
USP39-210ENST00000459775 NELL2Q99435 816 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 BBS2Q9BXC9 721 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 NEUROG2Q9H2A3 272 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 GTSE1Q9NYZ3 720 aa10.52□□□□□ -0.73
USP39-210ENST00000459775 NUP205Q92621 2012 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 WASH4PA8MWX3 477 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 RAMP2O60895 175 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 JCHAINP01591 159 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 PFKLP17858 780 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 IVDP26440 423 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 ETFBP38117 255 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 COPAP53621 1224 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 CDH4P55283 916 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 PDK1Q15118 436 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 CLPPQ16740 277 aaPredicted RBP10.51□□□□□ -0.73
USP39-210ENST00000459775 EML3Q32P44 896 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 IL31Q6EBC2 164 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 DRICH1Q6PGQ1 229 aaPredicted RBP10.51□□□□□ -0.73
USP39-210ENST00000459775 HJURPQ8NCD3 748 aaPredicted RBP10.51□□□□□ -0.73
USP39-210ENST00000459775 PRSS33Q8NF86 280 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 HTR3CQ8WXA8 447 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 SUSD6Q92537 303 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 FRMD6Q96NE9 622 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 ZFP14Q9HCL3 533 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 SPHK2Q9NRA0 654 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 ASIC3Q9UHC3 531 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 IPO11Q9UI26 975 aaKnown RBP10.51□□□□□ -0.73
USP39-210ENST00000459775 DRG1Q9Y295 367 aaKnown RBP10.51□□□□□ -0.73
USP39-210ENST00000459775 MUC6Q6W4X9 2439 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 A0A1B0GVM2 712 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 TCRBV7S3A2A0A539 114 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 TCAF2A6NFQ2 919 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 RNF103O00237 685 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 CBX4O00257 560 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 TP73O15350 636 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 CLDN11O75508 207 aa10.51□□□□□ -0.73
USP39-210ENST00000459775 LUC7L3O95232 432 aaKnown RBP10.51□□□□□ -0.73
USP39-210ENST00000459775 METTL18O95568 372 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms