RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 ARNTP27540 789 aa16.91■□□□□ 0.3
CCDC43-202ENST00000457422 GABRB3P28472 473 aa16.91■□□□□ 0.3
CCDC43-202ENST00000457422 CPA2P48052 419 aa16.91■□□□□ 0.3
CCDC43-202ENST00000457422 RAP1GDS1P52306 607 aa16.91■□□□□ 0.3
CCDC43-202ENST00000457422 CTXN3Q4LDR2 81 aa16.91■□□□□ 0.3
CCDC43-202ENST00000457422 MS4A13Q5J8X5 152 aa16.91■□□□□ 0.3
CCDC43-202ENST00000457422 KIAA0930Q6ICG6 404 aaPredicted RBP16.91■□□□□ 0.3
CCDC43-202ENST00000457422 ATAD1Q8NBU5 361 aa16.91■□□□□ 0.3
CCDC43-202ENST00000457422 B3GALT6Q96L58 329 aa16.91■□□□□ 0.3
CCDC43-202ENST00000457422 ANKRD27Q96NW4 1050 aa16.91■□□□□ 0.3
CCDC43-202ENST00000457422 PRKD2Q9BZL6 878 aa16.91■□□□□ 0.3
CCDC43-202ENST00000457422 ZYG11BQ9C0D3 744 aa16.91■□□□□ 0.3
CCDC43-202ENST00000457422 DCLRE1BQ9H816 532 aa16.91■□□□□ 0.3
CCDC43-202ENST00000457422 PNPOQ9NVS9 261 aa16.91■□□□□ 0.3
CCDC43-202ENST00000457422 CDY1Q9Y6F8 540 aa16.91■□□□□ 0.3
CCDC43-202ENST00000457422 A0A1W2PQ45 241 aaPredicted RBP16.9■□□□□ 0.3
CCDC43-202ENST00000457422 A0A1W2PQY0 241 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 OR6C75A6NL08 312 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 PRR5-ARHGAP8B1AHC4 643 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 B2RBV5 119 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 TRIM13O60858 407 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 ENTPD5O75356 428 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 KLHL2O95198 593 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 PAMP19021 973 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 ARHGAP8P85298 464 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 EFEMP1Q12805 493 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 RCN2Q14257 317 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 ESRP1Q6NXG1 681 aaKnown RBP16.9■□□□□ 0.3
CCDC43-202ENST00000457422 KDELC1Q6UW63 502 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 TFAP2DQ7Z6R9 452 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 RBM15BQ8NDT2 890 aaKnown RBP16.9■□□□□ 0.3
CCDC43-202ENST00000457422 TTC8Q8TAM2 541 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 CD99L2Q8TCZ2 262 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 NSMCE1Q8WV22 266 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 ELAC1Q9H777 363 aaKnown RBP16.9■□□□□ 0.3
CCDC43-202ENST00000457422 OLA1Q9NTK5 396 aaKnown RBP16.9■□□□□ 0.3
CCDC43-202ENST00000457422 OXSMQ9NWU1 459 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 TLK1Q9UKI8 766 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 DIAPH2O60879 1101 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 SOAT2O75908 522 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 NEBLO76041 1014 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 VAPBO95292 243 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 PSEN1P49768 467 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 IDH3AP50213 366 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 RENBPP51606 427 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 PRKAA2P54646 552 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 TNK2Q07912 1038 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 SLC12A1Q13621 1099 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 UBAP2LQ14157 1087 aaKnown RBP16.9■□□□□ 0.3
CCDC43-202ENST00000457422 TRIP4Q15650 581 aaPredicted RBP16.9■□□□□ 0.3
CCDC43-202ENST00000457422 DNAL1Q4LDG9 190 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 ZNF280DQ6N043 979 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 TMEM151AQ8N4L1 468 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 ATP6V0D2Q8N8Y2 350 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 IMP4Q96G21 291 aaKnown RBP16.9■□□□□ 0.3
CCDC43-202ENST00000457422 UBE2OQ9C0C9 1292 aaKnown RBP16.9■□□□□ 0.3
CCDC43-202ENST00000457422 ATP13A1Q9HD20 1204 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 PLA2G4CQ9UP65 541 aa16.9■□□□□ 0.3
CCDC43-202ENST00000457422 RTN3O95197 1032 aaPredicted RBP16.89■□□□□ 0.29
CCDC43-202ENST00000457422 SLC35E2BP0CK96 405 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 YWHAQP27348 245 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 CHRNA4P43681 627 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 GATMP50440 423 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 USP10Q14694 798 aaKnown RBP16.89■□□□□ 0.29
CCDC43-202ENST00000457422 ACBD5Q5T8D3 534 aaPredicted RBP16.89■□□□□ 0.29
CCDC43-202ENST00000457422 FAM171A1Q5VUB5 890 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 ZYG11AQ6WRX3 759 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 NAPRTQ6XQN6 538 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 RAPH1Q70E73 1250 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 BTN2A3PQ96KV6 586 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 ACE2Q9BYF1 805 aaPredicted RBP16.89■□□□□ 0.29
CCDC43-202ENST00000457422 CDH19Q9H159 772 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 ATXN3LQ9H3M9 355 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 STARD7Q9NQZ5 370 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 VPS45Q9NRW7 570 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.89■□□□□ 0.29
CCDC43-202ENST00000457422 SLC2A6Q9UGQ3 507 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.89■□□□□ 0.29
CCDC43-202ENST00000457422 CNTN5O94779 1100 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 SAT1P21673 171 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 HOXD10P28358 340 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 PGM1P36871 562 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 PGGT1BP53609 377 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 ARPP19P56211 112 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 WNT3AP56704 352 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 MPP1Q00013 466 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 NOGQ13253 232 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 PSMD5Q16401 504 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 KHDC1Q4VXA5 237 aaKnown RBP16.89■□□□□ 0.29
CCDC43-202ENST00000457422 KDELC2Q7Z4H8 507 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 DENND6AQ8IWF6 608 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 C2CD4AQ8NCU7 369 aaPredicted RBP16.89■□□□□ 0.29
CCDC43-202ENST00000457422 FBXO32Q969P5 355 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 HMCESQ96FZ2 354 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 TSNARE1Q96NA8 513 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 RANBP9Q96S59 729 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 FAM167BQ9BTA0 163 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 GPR62Q9BZJ7 368 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 TASP1Q9H6P5 420 aa16.89■□□□□ 0.29
CCDC43-202ENST00000457422 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms