RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 INHBEP58166 350 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 CEACAM7Q14002 265 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 MBLAC2Q68D91 279 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 FKBP9P1Q75LS8 142 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 OTOP3Q7RTS5 596 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 DPP9Q86TI2 863 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 C1orf127Q8N9H9 656 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 EGFL8Q99944 293 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 CYTH4Q9UIA0 394 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 RAB26Q9ULW5 256 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 FAM50BQ9Y247 325 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 ATRNL1Q5VV63 1379 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 LINC00032P0C843 101 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 CDK4P11802 303 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 CDKL1Q00532 357 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 PCLAFQ15004 111 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 AGAP9Q5VTM2 703 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 SYTL1Q8IYJ3 562 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 FSTL5Q8N475 847 aaPredicted RBP12.55□□□□□ -0.4
UBE3B-204ENST00000449510 EFHBQ8N7U6 833 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 LZICQ8WZA0 190 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 ESAMQ96AP7 390 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 DCPSQ96C86 337 aaKnown RBP12.55□□□□□ -0.4
UBE3B-204ENST00000449510 IFT43Q96FT9 208 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 CDT1Q9H211 546 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 USP29Q9HBJ7 922 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 FBRSL1Q9HCM7 1045 aaKnown RBP12.55□□□□□ -0.4
UBE3B-204ENST00000449510 EURLQ9NYK6 297 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 CICQ96RK0 1608 aaPredicted RBP12.55□□□□□ -0.4
UBE3B-204ENST00000449510 MICAL3Q7RTP6 2002 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 CHD4Q14839 1912 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 HS6ST1O60243 411 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 ERCC2P18074 760 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 CCNA2P20248 432 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 MSLNQ13421 630 aaPredicted RBP12.55□□□□□ -0.4
UBE3B-204ENST00000449510 KCNJ11Q14654 390 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 CMASQ8NFW8 434 aaPredicted RBP12.55□□□□□ -0.4
UBE3B-204ENST00000449510 HASPINQ8TF76 798 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 C12orf43Q96C57 262 aaKnown RBP12.55□□□□□ -0.4
UBE3B-204ENST00000449510 EXD2Q9NVH0 621 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 RBM22Q9NW64 420 aaKnown RBP eCLIP12.55□□□□□ -0.4
UBE3B-204ENST00000449510 PRPF19Q9UMS4 504 aaKnown RBP12.55□□□□□ -0.4
UBE3B-204ENST00000449510 ST14Q9Y5Y6 855 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 C16orf96A6NNT2 1141 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 EPHX2P34913 555 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 NEK2P51955 445 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 CHRNB3Q05901 458 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 LIPMQ5VYY2 423 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 RELL1Q8IUW5 271 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 TRPC4APQ8TEL6 797 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 DLG3Q92796 817 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 FAM162AQ96A26 154 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 FBXL20Q96IG2 436 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 COX4I2Q96KJ9 171 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 SIGLEC10Q96LC7 697 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 ACO2Q99798 780 aaKnown RBP12.55□□□□□ -0.4
UBE3B-204ENST00000449510 ABCG8Q9H221 673 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 DTLQ9NZJ0 730 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 KIF17Q9P2E2 1029 aa12.55□□□□□ -0.4
UBE3B-204ENST00000449510 ZBTB24O43167 697 aaPredicted RBP12.54□□□□□ -0.4
UBE3B-204ENST00000449510 ENDOD1O94919 500 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 MT-CYBP00156 380 aaPredicted RBP12.54□□□□□ -0.4
UBE3B-204ENST00000449510 ARSAP15289 507 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 YWHAQP27348 245 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 MAXP61244 160 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 HSDL1Q3SXM5 330 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 FRA10AC1Q70Z53 315 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 TAS2R42Q7RTR8 314 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 CLEC4DQ8WXI8 215 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 MRPL45Q9BRJ2 306 aaKnown RBP12.54□□□□□ -0.4
UBE3B-204ENST00000449510 ALG2Q9H553 416 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 LIMD1Q9UGP4 676 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 PCDHB12Q9Y5F1 795 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 TAF1P21675 1872 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 CYP4B1P13584 511 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 YBX3P16989 372 aaKnown RBP eCLIP12.54□□□□□ -0.4
UBE3B-204ENST00000449510 TKTL1P51854 596 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 XIAPP98170 497 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 SPESP1Q6UW49 350 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 KCTD8Q6ZWB6 473 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 TAS1R3Q7RTX0 852 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 FAM35AQ86V20 835 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 ZNF410Q86VK4 478 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 CROCCP3Q8IVE0 287 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 TP53INP2Q8IXH6 220 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 PGAM4Q8N0Y7 254 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 SLC25A23Q9BV35 468 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 FTHL17Q9BXU8 183 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 FANCEQ9HB96 536 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 PHF24Q9UPV7 400 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 TIMM22Q9Y584 194 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 KANSL1LA0AUZ9 987 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 E5RI56 91 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 EI24O14681 340 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 MPOP05164 745 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 APOA4P06727 396 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 ZNF286BP0CG31 522 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 HGFP14210 728 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 INSRRP14616 1297 aa12.54□□□□□ -0.4
UBE3B-204ENST00000449510 UBA1P22314 1058 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms