RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 TCAF1Q9Y4C2 921 aa17.71■□□□□ 0.42
SMC6-206ENST00000446852 PLIN3O60664 434 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 ARNTP27540 789 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 TMPRSS15P98073 1019 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 DSG1Q02413 1049 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 ESRP1Q6NXG1 681 aaKnown RBP17.7■□□□□ 0.42
SMC6-206ENST00000446852 POTEHQ6S545 545 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 PACS2Q86VP3 889 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 CNPY4Q8N129 248 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 PDZD8Q8NEN9 1154 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 PPHLN1Q8NEY8 458 aaKnown RBP17.7■□□□□ 0.42
SMC6-206ENST00000446852 ZNF398Q8TD17 642 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 ERP27Q96DN0 273 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 NACA2Q9H009 215 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 CYP4F11Q9HBI6 524 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 NUMBLQ9Y6R0 609 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 F5H5T6 163 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 BIRC5O15392 142 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 ACSL4O60488 711 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 CLTBP09497 229 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 MAPKAPK2P49137 400 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 SERPINB8P50452 374 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 IL10RBQ08334 325 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 ITKQ08881 620 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 DLG2Q15700 870 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 C5orf22Q49AR2 442 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 NLRP9Q7RTR0 991 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 OVCA2Q8WZ82 227 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 VPS39Q96JC1 886 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 ZNF558Q96NG5 402 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 LRRC37BQ96QE4 947 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 TRIM55Q9BYV6 548 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 ECT2Q9H8V3 914 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 KCNK13Q9HB14 408 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 ATP13A1Q9HD20 1204 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 ZNF358Q9NW07 568 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 DCDC2Q9UHG0 476 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 YIPF1Q9Y548 306 aa17.7■□□□□ 0.42
SMC6-206ENST00000446852 TGDSO95455 350 aa17.69■□□□□ 0.42
SMC6-206ENST00000446852 ALDH3A1P30838 453 aa17.69■□□□□ 0.42
SMC6-206ENST00000446852 ETFBP38117 255 aa17.69■□□□□ 0.42
SMC6-206ENST00000446852 ARCN1P48444 511 aaKnown RBP17.69■□□□□ 0.42
SMC6-206ENST00000446852 CSE1LP55060 971 aaKnown RBP17.69■□□□□ 0.42
SMC6-206ENST00000446852 OCRLQ01968 901 aa17.69■□□□□ 0.42
SMC6-206ENST00000446852 TNK2Q07912 1038 aa17.69■□□□□ 0.42
SMC6-206ENST00000446852 HECTD3Q5T447 861 aa17.69■□□□□ 0.42
SMC6-206ENST00000446852 ZCCHC23Q6ZST2 131 aa17.69■□□□□ 0.42
SMC6-206ENST00000446852 TRIM42Q8IWZ5 723 aa17.69■□□□□ 0.42
SMC6-206ENST00000446852 SLC25A41Q8N5S1 370 aa17.69■□□□□ 0.42
SMC6-206ENST00000446852 TMEM169Q96HH4 297 aa17.69■□□□□ 0.42
SMC6-206ENST00000446852 C20orf27Q9GZN8 174 aa17.69■□□□□ 0.42
SMC6-206ENST00000446852 TMEM216Q9P0N5 145 aa17.69■□□□□ 0.42
SMC6-206ENST00000446852 KIAA0100Q14667 2235 aaKnown RBP17.69■□□□□ 0.42
SMC6-206ENST00000446852 A0A0G2JND7 137 aa17.69■□□□□ 0.42
SMC6-206ENST00000446852 GJB3O75712 270 aa17.69■□□□□ 0.42
SMC6-206ENST00000446852 DCTN3O75935 186 aa17.69■□□□□ 0.42
SMC6-206ENST00000446852 VAPBO95292 243 aa17.69■□□□□ 0.42
SMC6-206ENST00000446852 KLKB1P03952 638 aa17.69■□□□□ 0.42
SMC6-206ENST00000446852 DLDP09622 509 aaKnown RBP17.69■□□□□ 0.42
SMC6-206ENST00000446852 YBEYP58557 167 aaPredicted RBP17.69■□□□□ 0.42
SMC6-206ENST00000446852 PLD6Q8N2A8 252 aaKnown RBP17.69■□□□□ 0.42
SMC6-206ENST00000446852 OR52K2Q8NGK3 314 aa17.69■□□□□ 0.42
SMC6-206ENST00000446852 ARRDC2Q8TBH0 407 aa17.69■□□□□ 0.42
SMC6-206ENST00000446852 AUTS2Q8WXX7 1259 aa17.69■□□□□ 0.42
SMC6-206ENST00000446852 MYRFLQ96LU7 910 aa17.69■□□□□ 0.42
SMC6-206ENST00000446852 C7orf26Q96N11 449 aa17.69■□□□□ 0.42
SMC6-206ENST00000446852 ARNT2Q9HBZ2 717 aa17.69■□□□□ 0.42
SMC6-206ENST00000446852 MRM3Q9HC36 420 aaKnown RBP17.69■□□□□ 0.42
SMC6-206ENST00000446852 SLC40A1Q9NP59 571 aa17.69■□□□□ 0.42
SMC6-206ENST00000446852 TREX1Q9NSU2 369 aa17.69■□□□□ 0.42
SMC6-206ENST00000446852 A0A0D9SEW6 157 aa17.68■□□□□ 0.42
SMC6-206ENST00000446852 TIMM44O43615 452 aa17.68■□□□□ 0.42
SMC6-206ENST00000446852 PROCP04070 461 aa17.68■□□□□ 0.42
SMC6-206ENST00000446852 GABRB3P28472 473 aa17.68■□□□□ 0.42
SMC6-206ENST00000446852 MTA1Q13330 715 aa17.68■□□□□ 0.42
SMC6-206ENST00000446852 PLD1Q13393 1074 aa17.68■□□□□ 0.42
SMC6-206ENST00000446852 PCLAFQ15004 111 aa17.68■□□□□ 0.42
SMC6-206ENST00000446852 SETDB1Q15047 1291 aa17.68■□□□□ 0.42
SMC6-206ENST00000446852 CNGA3Q16281 694 aa17.68■□□□□ 0.42
SMC6-206ENST00000446852 FASTKD1Q53R41 847 aaKnown RBP17.68■□□□□ 0.42
SMC6-206ENST00000446852 ATG16L1Q676U5 607 aa17.68■□□□□ 0.42
SMC6-206ENST00000446852 TPGS2Q68CL5 300 aa17.68■□□□□ 0.42
SMC6-206ENST00000446852 KLHDC10Q6PID8 442 aa17.68■□□□□ 0.42
SMC6-206ENST00000446852 DENND1CQ8IV53 801 aa17.68■□□□□ 0.42
SMC6-206ENST00000446852 RAB3IL1Q8TBN0 382 aa17.68■□□□□ 0.42
SMC6-206ENST00000446852 PTCD2Q8WV60 388 aaKnown RBP17.68■□□□□ 0.42
SMC6-206ENST00000446852 PRICKLE1Q96MT3 831 aaPredicted RBP17.68■□□□□ 0.42
SMC6-206ENST00000446852 GKN1Q9NS71 199 aa17.68■□□□□ 0.42
SMC6-206ENST00000446852 HSFX1Q9UBD0 423 aa17.68■□□□□ 0.42
SMC6-206ENST00000446852 ZFP37Q9Y6Q3 630 aaPredicted RBP17.68■□□□□ 0.42
SMC6-206ENST00000446852 PRAMEF11O60813 436 aa17.67■□□□□ 0.42
SMC6-206ENST00000446852 SNNO75324 88 aaPredicted RBP17.67■□□□□ 0.42
SMC6-206ENST00000446852 RFC2P35250 354 aa17.67■□□□□ 0.42
SMC6-206ENST00000446852 HARS2P49590 506 aaKnown RBP17.67■□□□□ 0.42
SMC6-206ENST00000446852 IRF9Q00978 393 aa17.67■□□□□ 0.42
SMC6-206ENST00000446852 SEPT6Q14141 434 aa17.67■□□□□ 0.42
SMC6-206ENST00000446852 LBRQ14739 615 aaKnown RBP17.67■□□□□ 0.42
SMC6-206ENST00000446852 GRM3Q14832 879 aa17.67■□□□□ 0.42
SMC6-206ENST00000446852 INSCQ1MX18 579 aa17.67■□□□□ 0.42
SMC6-206ENST00000446852 MBLAC2Q68D91 279 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms