RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 SRRTQ9BXP5 876 aaKnown RBP14.71□□□□□ -0.05
HMGN1-208ENST00000443046 FAM204AQ9H8W3 233 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 DYRK4Q9NR20 520 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 ASNSD1Q9NWL6 643 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 DDIT4Q9NX09 232 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 IL36AQ9UHA7 158 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 PCDHGA7Q9Y5G6 932 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 FADS3Q9Y5Q0 445 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 CCDC187A0A096LP49 1063 aa14.7□□□□□ -0.06
HMGN1-208ENST00000443046 AP1G1O43747 822 aa14.7□□□□□ -0.06
HMGN1-208ENST00000443046 PAGE1O75459 146 aa14.7□□□□□ -0.06
HMGN1-208ENST00000443046 GCATO75600 419 aa14.7□□□□□ -0.06
HMGN1-208ENST00000443046 LEFTY1O75610 366 aa14.7□□□□□ -0.06
HMGN1-208ENST00000443046 ITGB2P05107 769 aa14.7□□□□□ -0.06
HMGN1-208ENST00000443046 ADRB3P13945 408 aa14.7□□□□□ -0.06
HMGN1-208ENST00000443046 JUNDP17535 347 aa14.7□□□□□ -0.06
HMGN1-208ENST00000443046 ITGB7P26010 798 aa14.7□□□□□ -0.06
HMGN1-208ENST00000443046 PFN3P60673 137 aa14.7□□□□□ -0.06
HMGN1-208ENST00000443046 PDCLQ13371 301 aa14.7□□□□□ -0.06
HMGN1-208ENST00000443046 ZSCAN23Q3MJ62 389 aa14.7□□□□□ -0.06
HMGN1-208ENST00000443046 COLEC12Q5KU26 742 aa14.7□□□□□ -0.06
HMGN1-208ENST00000443046 CRTC1Q6UUV9 634 aa14.7□□□□□ -0.06
HMGN1-208ENST00000443046 DPY19L3Q6ZPD9 716 aa14.7□□□□□ -0.06
HMGN1-208ENST00000443046 ZSCAN30Q86W11 494 aa14.7□□□□□ -0.06
HMGN1-208ENST00000443046 SLC35F3Q8IY50 421 aa14.7□□□□□ -0.06
HMGN1-208ENST00000443046 WDTC1Q8N5D0 677 aa14.7□□□□□ -0.06
HMGN1-208ENST00000443046 EHBP1Q8NDI1 1231 aa14.7□□□□□ -0.06
HMGN1-208ENST00000443046 ASB12Q8WXK4 309 aa14.7□□□□□ -0.06
HMGN1-208ENST00000443046 PPP1R16AQ96I34 528 aa14.7□□□□□ -0.06
HMGN1-208ENST00000443046 TBATAQ96M53 351 aa14.7□□□□□ -0.06
HMGN1-208ENST00000443046 FAM117AQ9C073 453 aa14.7□□□□□ -0.06
HMGN1-208ENST00000443046 MUC3BQ9H195 1237 aa14.7□□□□□ -0.06
HMGN1-208ENST00000443046 PNMA8BQ9ULN7 279 aaPredicted RBP14.7□□□□□ -0.06
HMGN1-208ENST00000443046 SCN8AQ9UQD0 1980 aa14.7□□□□□ -0.06
HMGN1-208ENST00000443046 UTP20O75691 2785 aaKnown RBP14.69□□□□□ -0.06
HMGN1-208ENST00000443046 DOCK4Q8N1I0 1966 aa14.69□□□□□ -0.06
HMGN1-208ENST00000443046 I6L893 689 aaPredicted RBP14.69□□□□□ -0.06
HMGN1-208ENST00000443046 MUSKO15146 869 aa14.69□□□□□ -0.06
HMGN1-208ENST00000443046 SUV39H1O43463 412 aa14.69□□□□□ -0.06
HMGN1-208ENST00000443046 GGCXP38435 758 aa14.69□□□□□ -0.06
HMGN1-208ENST00000443046 NEK3P51956 506 aa14.69□□□□□ -0.06
HMGN1-208ENST00000443046 MAPK8IP2Q13387 824 aaPredicted RBP14.69□□□□□ -0.06
HMGN1-208ENST00000443046 PNOCQ13519 176 aa14.69□□□□□ -0.06
HMGN1-208ENST00000443046 PDE1CQ14123 709 aaPredicted RBP14.69□□□□□ -0.06
HMGN1-208ENST00000443046 ALFQ53S48 1182 aa14.69□□□□□ -0.06
HMGN1-208ENST00000443046 C6orf132Q5T0Z8 1188 aa14.69□□□□□ -0.06
HMGN1-208ENST00000443046 C22orf39Q6P5X5 142 aa14.69□□□□□ -0.06
HMGN1-208ENST00000443046 SETD3Q86TU7 594 aaPredicted RBP14.69□□□□□ -0.06
HMGN1-208ENST00000443046 LURAP1LQ8IV03 231 aa14.69□□□□□ -0.06
HMGN1-208ENST00000443046 DCAF4L2Q8NA75 395 aa14.69□□□□□ -0.06
HMGN1-208ENST00000443046 SPATA20Q8TB22 786 aa14.69□□□□□ -0.06
HMGN1-208ENST00000443046 GRIN3AQ8TCU5 1115 aa14.69□□□□□ -0.06
HMGN1-208ENST00000443046 LMX1AQ8TE12 382 aa14.69□□□□□ -0.06
HMGN1-208ENST00000443046 BTN2A2Q8WVV5 523 aa14.69□□□□□ -0.06
HMGN1-208ENST00000443046 NAT6Q93015 286 aa14.69□□□□□ -0.06
HMGN1-208ENST00000443046 GSDMAQ96QA5 445 aa14.69□□□□□ -0.06
HMGN1-208ENST00000443046 IL12RB2Q99665 862 aa14.69□□□□□ -0.06
HMGN1-208ENST00000443046 SEMA3CQ99985 751 aa14.69□□□□□ -0.06
HMGN1-208ENST00000443046 TRIM4Q9C037 500 aa14.69□□□□□ -0.06
HMGN1-208ENST00000443046 ANLNQ9NQW6 1124 aa14.69□□□□□ -0.06
HMGN1-208ENST00000443046 RMND1Q9NWS8 449 aa14.69□□□□□ -0.06
HMGN1-208ENST00000443046 HEMK1Q9Y5R4 338 aaPredicted RBP14.69□□□□□ -0.06
HMGN1-208ENST00000443046 SYNJ2BP-COX16A0A087WUM0 186 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 A0A0D9SEW6 157 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 DRGXA6NNA5 263 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 LMO7DNF2Z398 122 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 FPGTO14772 594 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 MED7O43513 233 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 HSF2BPO75031 334 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 RHOCP08134 193 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 SLC5A2P31639 672 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 L1CAMP32004 1257 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 RPIAP49247 311 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 KRT85P78386 507 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 CETN1Q12798 172 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 EFHC1Q5JVL4 640 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 OTUD1Q5VV17 481 aaPredicted RBP14.68□□□□□ -0.06
HMGN1-208ENST00000443046 FOXR1Q6PIV2 292 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 LINGO4Q6UY18 593 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 ATG14Q6ZNE5 492 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 VOPP1Q96AW1 172 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 SGF29Q96ES7 293 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 CEP63Q96MT8 703 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 CPXM1Q96SM3 734 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 CCDC3Q9BQI4 270 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 TNKS2Q9H2K2 1166 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 TCEAL2Q9H3H9 227 aaPredicted RBP14.68□□□□□ -0.06
HMGN1-208ENST00000443046 ACP6Q9NPH0 428 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 ARHGEF38Q9NXL2 777 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.68□□□□□ -0.06
HMGN1-208ENST00000443046 COX16Q9P0S2 106 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 SPASTQ9UBP0 616 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 ZNF212Q9UDV6 495 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 ZDHHC9Q9Y397 364 aa14.68□□□□□ -0.06
HMGN1-208ENST00000443046 SPENQ96T58 3664 aaKnown RBP14.68□□□□□ -0.06
HMGN1-208ENST00000443046 IGLON5A6NGN9 336 aa14.67□□□□□ -0.06
HMGN1-208ENST00000443046 PLD2O14939 933 aa14.67□□□□□ -0.06
HMGN1-208ENST00000443046 YY2O15391 372 aa14.67□□□□□ -0.06
HMGN1-208ENST00000443046 ZMPSTE24O75844 475 aa14.67□□□□□ -0.06
HMGN1-208ENST00000443046 LETM1O95202 739 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms