RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 DNERQ8NFT8 737 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 NKD2Q969F2 451 aaPredicted RBP6.45□□□□□ -1.38
BDNF-211ENST00000439476 TUBGCP5Q96RT8 1024 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 C9orf16Q9BUW7 83 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 CINPQ9BW66 212 aaPredicted RBP6.45□□□□□ -1.38
BDNF-211ENST00000439476 MROH8Q9H579 483 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 COPS7BQ9H9Q2 264 aaPredicted RBP6.45□□□□□ -1.38
BDNF-211ENST00000439476 PIH1D1Q9NWS0 290 aaKnown RBP6.45□□□□□ -1.38
BDNF-211ENST00000439476 DPP3Q9NY33 737 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 PACSIN3Q9UKS6 424 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 TMEM5Q9Y2B1 443 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 A0A087WXM4 84 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 A0A1W2PRQ8 180 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 WDR27A2RRH5 827 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 SIGLEC16A6NMB1 481 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 F8W810 466 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 M0QX08 132 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 TK2O00142 265 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 FBP2O00757 339 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 CDK2AP1O14519 115 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 HAT1O14929 419 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 TRIM13O60858 407 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 AVILO75366 819 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 ZMPSTE24O75844 475 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 ITGALP20701 1170 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 DSG3P32926 999 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 GLRBP48167 497 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 PRIM2P49643 509 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 CDH8P55286 799 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 C9orf131Q5VYM1 1079 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 LPCAT4Q643R3 524 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 EFCAB12Q6NXP0 572 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 TTC7BQ86TV6 843 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 CAND1Q86VP6 1230 aaKnown RBP6.45□□□□□ -1.38
BDNF-211ENST00000439476 ZNF557Q8N988 423 aaPredicted RBP6.45□□□□□ -1.38
BDNF-211ENST00000439476 SNX31Q8N9S9 440 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 SLC16A10Q8TF71 515 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 SLC44A1Q8WWI5 657 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 CPT1BQ92523 772 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 TMEM176AQ96HP8 235 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 MAGEB10Q96LZ2 347 aaPredicted RBP6.45□□□□□ -1.38
BDNF-211ENST00000439476 CPNE1Q99829 537 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 SLC25A23Q9BV35 468 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 SSU72Q9NP77 194 aaKnown RBP6.45□□□□□ -1.38
BDNF-211ENST00000439476 EXOSC4Q9NPD3 245 aaKnown RBP6.45□□□□□ -1.38
BDNF-211ENST00000439476 WWOXQ9NZC7 414 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 UBA2Q9UBT2 640 aaPredicted RBP6.45□□□□□ -1.38
BDNF-211ENST00000439476 CRLS1Q9UJA2 301 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 ADAM28Q9UKQ2 775 aa6.45□□□□□ -1.38
BDNF-211ENST00000439476 SUPT7LO94864 414 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 CRYZL1O95825 349 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 NPPAP01160 153 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 KRT6AP02538 564 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 KRT6BP04259 564 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 UQCRBP14927 111 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 VAV1P15498 845 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 PGAM1P18669 254 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 CHRM3P20309 590 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 MSH3P20585 1137 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 MMP8P22894 467 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 ME2P23368 584 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 TM4SF1P30408 202 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 PTPN7P35236 360 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 KRT6CP48668 564 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 BST2Q10589 180 aaKnown RBP6.44□□□□□ -1.38
BDNF-211ENST00000439476 CDH17Q12864 832 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 DCTN2Q13561 401 aaKnown RBP6.44□□□□□ -1.38
BDNF-211ENST00000439476 SMU1Q2TAY7 513 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 FNBP1LQ5T0N5 605 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 MON1BQ7L1V2 547 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 ARCQ7LC44 396 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 KRT73Q86Y46 540 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 CENPLQ8N0S6 344 aaPredicted RBP6.44□□□□□ -1.38
BDNF-211ENST00000439476 IL31RAQ8NI17 732 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 LENG9Q96B70 501 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 DNAJC1Q96KC8 554 aaKnown RBP6.44□□□□□ -1.38
BDNF-211ENST00000439476 TMEM79Q9BSE2 394 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 THUMPD3Q9BV44 507 aaKnown RBP6.44□□□□□ -1.38
BDNF-211ENST00000439476 COLEC11Q9BWP8 271 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 ADGRE3Q9BY15 652 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 UGT2B28Q9BY64 529 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 TXLNGYQ9BZA5 131 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 IL1RL2Q9HB29 575 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 AFF4Q9UHB7 1163 aaKnown RBP6.44□□□□□ -1.38
BDNF-211ENST00000439476 RNF112Q9ULX5 631 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 TPRKBQ9Y3C4 175 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 C4AP0C0L4 1744 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 C4BP0C0L5 1744 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 SPATA31A6Q5VVP1 1343 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 MATN2O00339 956 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 UBDO15205 165 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 GUCA1CO95843 209 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 MLNP12872 115 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 NCAM1P13591 858 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 ZNF23P17027 643 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 CYP2F1P24903 491 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 AXLP30530 894 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 LRPAP1P30533 357 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 PKNOX1P55347 436 aa6.44□□□□□ -1.38
BDNF-211ENST00000439476 FOLH1Q04609 750 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms