RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 FCRL2Q96LA5 508 aaPredicted RBP9.63□□□□□ -0.87
CUX1-206ENST00000437600 FRMD8Q9BZ67 464 aaPredicted RBP9.63□□□□□ -0.87
CUX1-206ENST00000437600 SLC39A8Q9C0K1 460 aa9.63□□□□□ -0.87
CUX1-206ENST00000437600 BRD8Q9H0E9 1235 aa9.63□□□□□ -0.87
CUX1-206ENST00000437600 THAP1Q9NVV9 213 aa9.63□□□□□ -0.87
CUX1-206ENST00000437600 COPG2Q9UBF2 871 aa9.63□□□□□ -0.87
CUX1-206ENST00000437600 COL6A3P12111 3177 aa9.63□□□□□ -0.87
CUX1-206ENST00000437600 TANC1Q9C0D5 1861 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 DNAH14Q0VDD8 3507 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.62□□□□□ -0.87
CUX1-206ENST00000437600 HACD1B0YJ81 288 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 SCAMP3O14828 347 aaKnown RBP9.62□□□□□ -0.87
CUX1-206ENST00000437600 DCXO43602 365 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 USP1O94782 785 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 TGDSO95455 350 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 AP2A1O95782 977 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 BAG2O95816 211 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 CLTBP09497 229 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 CPA3P15088 417 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 GABRB3P28472 473 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 SEMA3BQ13214 749 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 VARS2Q5ST30 1063 aaKnown RBP9.62□□□□□ -0.87
CUX1-206ENST00000437600 OTOP2Q7RTS6 562 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 TAS1R1Q7RTX1 841 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 BNIPLQ7Z465 357 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 URGCPQ8TCY9 931 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 SORT1Q99523 831 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 FERMT1Q9BQL6 677 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 YIPF3Q9GZM5 350 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 SAR1AQ9NR31 198 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 PCDHB7Q9Y5E2 793 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 A0A0C4DFX4 3053 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 NEMP2A6NFY4 417 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 SNNO75324 88 aaPredicted RBP9.62□□□□□ -0.87
CUX1-206ENST00000437600 AHSGP02765 367 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 GP5P40197 560 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 CCNFP41002 786 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 TUBP50607 506 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 DSC1Q08554 894 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 SEPT6Q14141 434 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 PTPRCAPQ14761 206 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 CTXN3Q4LDR2 81 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 ZNF789Q5FWF6 425 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 ISLR2Q6UXK2 745 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 RSPO2Q6UXX9 243 aaPredicted RBP9.62□□□□□ -0.87
CUX1-206ENST00000437600 ARCQ7LC44 396 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 NECAB2Q7Z6G3 386 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 CIR1Q86X95 450 aaPredicted RBP9.62□□□□□ -0.87
CUX1-206ENST00000437600 SNX31Q8N9S9 440 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 KLHL23Q8NBE8 558 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 SPDYE1Q8NFV5 336 aaPredicted RBP9.62□□□□□ -0.87
CUX1-206ENST00000437600 PPP4R1Q8TF05 950 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 MTBPQ96DY7 904 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 C7orf26Q96N11 449 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 PKMYT1Q99640 499 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 SEPT5Q99719 369 aaPredicted RBP9.62□□□□□ -0.87
CUX1-206ENST00000437600 CRISPLD1Q9H336 500 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 LRRC40Q9H9A6 602 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 BATF3Q9NR55 127 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 TBX21Q9UL17 535 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 ACTL7AQ9Y615 435 aa9.62□□□□□ -0.87
CUX1-206ENST00000437600 A0A1W2PQH9 124 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 TBKBP1A7MCY6 615 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 CAPN14A8MX76 684 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 PROCP04070 461 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 FAM163BP0C2L3 166 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 CPB1P15086 417 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 GNAZP19086 355 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 EPHA3P29320 983 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 ETFBP38117 255 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 ABL2P42684 1182 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 SERPINB9P50453 376 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 PPIDQ08752 370 aaKnown RBP9.61□□□□□ -0.87
CUX1-206ENST00000437600 MPP3Q13368 585 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 SLC9B1Q4ZJI4 515 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 SPDYAQ5MJ70 313 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 BTBD8Q5XKL5 378 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 PRSS55Q6UWB4 352 aaPredicted RBP9.61□□□□□ -0.87
CUX1-206ENST00000437600 WDR75Q8IWA0 830 aaKnown RBP9.61□□□□□ -0.87
CUX1-206ENST00000437600 RNF148Q8N7C7 305 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 CFAP61Q8NHU2 1237 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 KCTD4Q8WVF5 259 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 SCYL1Q96KG9 808 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 TEKT5Q96M29 485 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 NDNQ99608 321 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 EPAS1Q99814 870 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 TASP1Q9H6P5 420 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 CSNK1G1Q9HCP0 422 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 RBM22Q9NW64 420 aaKnown RBP eCLIP9.61□□□□□ -0.87
CUX1-206ENST00000437600 KCNK4Q9NYG8 393 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 IGSF9Q9P2J2 1179 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 LRFN2Q9ULH4 789 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 TMEM233B4DJY2 109 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 FBXO21O94952 628 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 CYP11A1P05108 521 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 JUNP05412 331 aaKnown RBP9.61□□□□□ -0.87
CUX1-206ENST00000437600 PIRTP0C851 137 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 TSPAN8P19075 237 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 SERPINB5P36952 375 aa9.61□□□□□ -0.87
CUX1-206ENST00000437600 SCNN1AP37088 669 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms