RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 DYNC1I2Q13409 638 aaKnown RBP16.81■□□□□ 0.28
CMTM3-202ENST00000424011 TPGS2Q68CL5 300 aa16.81■□□□□ 0.28
CMTM3-202ENST00000424011 USP33Q8TEY7 942 aa16.81■□□□□ 0.28
CMTM3-202ENST00000424011 TOP1MTQ969P6 601 aa16.81■□□□□ 0.28
CMTM3-202ENST00000424011 ERP27Q96DN0 273 aa16.81■□□□□ 0.28
CMTM3-202ENST00000424011 CERS2Q96G23 380 aa16.81■□□□□ 0.28
CMTM3-202ENST00000424011 SLC13A1Q9BZW2 595 aa16.81■□□□□ 0.28
CMTM3-202ENST00000424011 NDFIP2Q9NV92 336 aa16.81■□□□□ 0.28
CMTM3-202ENST00000424011 DNMT3LQ9UJW3 386 aa16.81■□□□□ 0.28
CMTM3-202ENST00000424011 TRIM33Q9UPN9 1127 aa16.81■□□□□ 0.28
CMTM3-202ENST00000424011 PLLPQ9Y342 182 aa16.81■□□□□ 0.28
CMTM3-202ENST00000424011 DRGXA6NNA5 263 aa16.81■□□□□ 0.28
CMTM3-202ENST00000424011 SOD2P04179 222 aa16.81■□□□□ 0.28
CMTM3-202ENST00000424011 CSF2RAP15509 400 aa16.81■□□□□ 0.28
CMTM3-202ENST00000424011 ATP5C1P36542 298 aaKnown RBP16.81■□□□□ 0.28
CMTM3-202ENST00000424011 SERPINB4P48594 390 aa16.81■□□□□ 0.28
CMTM3-202ENST00000424011 HNRNPDQ14103 355 aaKnown RBP16.81■□□□□ 0.28
CMTM3-202ENST00000424011 SNX30Q5VWJ9 437 aa16.81■□□□□ 0.28
CMTM3-202ENST00000424011 ASRGL1Q7L266 308 aa16.81■□□□□ 0.28
CMTM3-202ENST00000424011 KIF2BQ8N4N8 673 aa16.81■□□□□ 0.28
CMTM3-202ENST00000424011 RFWD2Q8NHY2 731 aa16.81■□□□□ 0.28
CMTM3-202ENST00000424011 ACMSDQ8TDX5 336 aa16.81■□□□□ 0.28
CMTM3-202ENST00000424011 ZNF558Q96NG5 402 aa16.81■□□□□ 0.28
CMTM3-202ENST00000424011 RETREG1Q9H6L5 497 aa16.81■□□□□ 0.28
CMTM3-202ENST00000424011 RBM22Q9NW64 420 aaKnown RBP eCLIP16.81■□□□□ 0.28
CMTM3-202ENST00000424011 EFCAB14O75071 495 aa16.8■□□□□ 0.28
CMTM3-202ENST00000424011 RAG1P15918 1043 aa16.8■□□□□ 0.28
CMTM3-202ENST00000424011 FYB2Q5VWT5 728 aa16.8■□□□□ 0.28
CMTM3-202ENST00000424011 FBXL22Q6P050 247 aa16.8■□□□□ 0.28
CMTM3-202ENST00000424011 OTOP3Q7RTS5 596 aa16.8■□□□□ 0.28
CMTM3-202ENST00000424011 RASSF3Q86WH2 238 aa16.8■□□□□ 0.28
CMTM3-202ENST00000424011 ZNF461Q8TAF7 563 aa16.8■□□□□ 0.28
CMTM3-202ENST00000424011 TMEM169Q96HH4 297 aa16.8■□□□□ 0.28
CMTM3-202ENST00000424011 ZNF512Q96ME7 567 aaPredicted RBP16.8■□□□□ 0.28
CMTM3-202ENST00000424011 LRRC37BQ96QE4 947 aa16.8■□□□□ 0.28
CMTM3-202ENST00000424011 CPNE1Q99829 537 aa16.8■□□□□ 0.28
CMTM3-202ENST00000424011 TSSK1BQ9BXA7 367 aa16.8■□□□□ 0.28
CMTM3-202ENST00000424011 PCMTD2Q9NV79 361 aa16.8■□□□□ 0.28
CMTM3-202ENST00000424011 G3BP2Q9UN86 482 aaKnown RBP16.8■□□□□ 0.28
CMTM3-202ENST00000424011 ADAM12O43184 909 aa16.8■□□□□ 0.28
CMTM3-202ENST00000424011 USP4Q13107 963 aa16.8■□□□□ 0.28
CMTM3-202ENST00000424011 SETDB1Q15047 1291 aa16.8■□□□□ 0.28
CMTM3-202ENST00000424011 C1QTNF12Q5T7M4 302 aa16.8■□□□□ 0.28
CMTM3-202ENST00000424011 RAP1GAP2Q684P5 730 aa16.8■□□□□ 0.28
CMTM3-202ENST00000424011 KLHDC10Q6PID8 442 aa16.8■□□□□ 0.28
CMTM3-202ENST00000424011 PACS1Q6VY07 963 aa16.8■□□□□ 0.28
CMTM3-202ENST00000424011 CCDC117Q8IWD4 279 aaPredicted RBP16.8■□□□□ 0.28
CMTM3-202ENST00000424011 ZNF669Q96BR6 464 aaPredicted RBP16.8■□□□□ 0.28
CMTM3-202ENST00000424011 TBL1YQ9BQ87 522 aa16.8■□□□□ 0.28
CMTM3-202ENST00000424011 MECRQ9BV79 373 aa16.8■□□□□ 0.28
CMTM3-202ENST00000424011 NACA2Q9H009 215 aa16.8■□□□□ 0.28
CMTM3-202ENST00000424011 CCSER2Q9H7U1 834 aa16.8■□□□□ 0.28
CMTM3-202ENST00000424011 ENTPD7Q9NQZ7 604 aa16.8■□□□□ 0.28
CMTM3-202ENST00000424011 UBP1Q9NZI7 540 aa16.8■□□□□ 0.28
CMTM3-202ENST00000424011 DCTN4Q9UJW0 460 aa16.8■□□□□ 0.28
CMTM3-202ENST00000424011 FNDC1Q4ZHG4 1894 aaPredicted RBP16.8■□□□□ 0.28
CMTM3-202ENST00000424011 ZSCAN9O15535 394 aaPredicted RBP16.79■□□□□ 0.28
CMTM3-202ENST00000424011 DCTN3O75935 186 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 HMBSP08397 361 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 SP100P23497 879 aaPredicted RBP16.79■□□□□ 0.28
CMTM3-202ENST00000424011 MAPKAPK2P49137 400 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 DSG1Q02413 1049 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 KLC1Q07866 573 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 SMAD1Q15797 465 aaKnown RBP16.79■□□□□ 0.28
CMTM3-202ENST00000424011 PARP15Q460N3 678 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 ANKRD20A4Q4UJ75 823 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 GRTP1Q5TC63 336 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 CES3Q6UWW8 571 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 NLRP9Q7RTR0 991 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 TFAP2DQ7Z6R9 452 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 UBE2Q1Q7Z7E8 422 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 ZNF689Q96CS4 500 aaPredicted RBP16.79■□□□□ 0.28
CMTM3-202ENST00000424011 RPRD1AQ96P16 312 aaPredicted RBP16.79■□□□□ 0.28
CMTM3-202ENST00000424011 VN1R3Q9BXE9 311 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 MCOLN1Q9GZU1 580 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 SOX13Q9UN79 622 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 MICAL3Q7RTP6 2002 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 C2CD2LO14523 706 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 ATP9BO43861 1147 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 ABLIM3O94929 683 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 UNC5CO95185 931 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 TOP3BO95985 862 aaKnown RBP16.79■□□□□ 0.28
CMTM3-202ENST00000424011 TROVE2P10155 538 aaKnown RBP eCLIP16.79■□□□□ 0.28
CMTM3-202ENST00000424011 RPL17P18621 184 aaKnown RBP16.79■□□□□ 0.28
CMTM3-202ENST00000424011 GP5P40197 560 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 ALDH1A3P47895 512 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 YBEYP58557 167 aaPredicted RBP16.79■□□□□ 0.28
CMTM3-202ENST00000424011 TMEM154Q6P9G4 183 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 TRIM42Q8IWZ5 723 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 NDUFAF2Q8N183 169 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 TMEM199Q8N511 208 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 ATP2A3Q93084 1043 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 PLEKHG4BQ96PX9 1271 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 CLSTN3Q9BQT9 956 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 NOL6Q9H6R4 1146 aaKnown RBP16.79■□□□□ 0.28
CMTM3-202ENST00000424011 IL1RAPL1Q9NZN1 696 aa16.79■□□□□ 0.28
CMTM3-202ENST00000424011 PDHA1P08559 390 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 LAG3P18627 525 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 CRHR1P34998 444 aa16.78■□□□□ 0.28
CMTM3-202ENST00000424011 HARS2P49590 506 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms