RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 KLHDC7AQ5VTJ3 777 aa16.47■□□□□ 0.23
COL18A1-205ENST00000423214 NOP9Q86U38 636 aaKnown RBP16.47■□□□□ 0.23
COL18A1-205ENST00000423214 EPS8L1Q8TE68 723 aa16.47■□□□□ 0.23
COL18A1-205ENST00000423214 RFFLQ8WZ73 363 aa16.47■□□□□ 0.23
COL18A1-205ENST00000423214 HEPHQ9BQS7 1158 aa16.47■□□□□ 0.23
COL18A1-205ENST00000423214 UCKL1Q9NWZ5 548 aa16.47■□□□□ 0.23
COL18A1-205ENST00000423214 DNAJC28Q9NX36 388 aa16.47■□□□□ 0.23
COL18A1-205ENST00000423214 FCF1Q9Y324 198 aaKnown RBP16.47■□□□□ 0.23
COL18A1-205ENST00000423214 WASF2Q9Y6W5 498 aa16.47■□□□□ 0.23
COL18A1-205ENST00000423214 RP1P56715 2156 aa16.46■□□□□ 0.23
COL18A1-205ENST00000423214 NEMP2A6NFY4 417 aa16.46■□□□□ 0.23
COL18A1-205ENST00000423214 H3BM21 787 aa16.46■□□□□ 0.23
COL18A1-205ENST00000423214 BRINP1O60477 761 aa16.46■□□□□ 0.23
COL18A1-205ENST00000423214 ITPKBP27987 946 aa16.46■□□□□ 0.23
COL18A1-205ENST00000423214 HNRNPKP61978 463 aaKnown RBP eCLIP16.46■□□□□ 0.237e-12■■■■□ 20
COL18A1-205ENST00000423214 ARF5P84085 180 aa16.46■□□□□ 0.23
COL18A1-205ENST00000423214 SLC20A2Q08357 652 aa16.46■□□□□ 0.23
COL18A1-205ENST00000423214 ARL13BQ3SXY8 428 aa16.46■□□□□ 0.23
COL18A1-205ENST00000423214 TRNP1Q6NT89 227 aa16.46■□□□□ 0.23
COL18A1-205ENST00000423214 KYAT3Q6YP21 454 aaKnown RBP16.46■□□□□ 0.23
COL18A1-205ENST00000423214 PARS2Q7L3T8 475 aaKnown RBP16.46■□□□□ 0.23
COL18A1-205ENST00000423214 ABI3BPQ7Z7G0 1075 aa16.46■□□□□ 0.23
COL18A1-205ENST00000423214 ZSCAN30Q86W11 494 aa16.46■□□□□ 0.23
COL18A1-205ENST00000423214 DCP2Q8IU60 420 aaKnown RBP16.46■□□□□ 0.23
COL18A1-205ENST00000423214 SLC22A18ASQ8N1D0 253 aa16.46■□□□□ 0.23
COL18A1-205ENST00000423214 SLC25A45Q8N413 288 aa16.46■□□□□ 0.23
COL18A1-205ENST00000423214 RYBPQ8N488 228 aaPredicted RBP16.46■□□□□ 0.23
COL18A1-205ENST00000423214 DCBLD1Q8N8Z6 715 aa16.46■□□□□ 0.23
COL18A1-205ENST00000423214 SNIP1Q8TAD8 396 aaKnown RBP16.46■□□□□ 0.23
COL18A1-205ENST00000423214 CPA5Q8WXQ8 436 aa16.46■□□□□ 0.23
COL18A1-205ENST00000423214 IFT43Q96FT9 208 aa16.46■□□□□ 0.23
COL18A1-205ENST00000423214 UBL7Q96S82 380 aaPredicted RBP16.46■□□□□ 0.23
COL18A1-205ENST00000423214 TM6SF2Q9BZW4 377 aa16.46■□□□□ 0.23
COL18A1-205ENST00000423214 NLGN3Q9NZ94 848 aa16.46■□□□□ 0.23
COL18A1-205ENST00000423214 LRP4O75096 1905 aa16.46■□□□□ 0.23
COL18A1-205ENST00000423214 BPTFQ12830 3046 aa16.46■□□□□ 0.23
COL18A1-205ENST00000423214 COL27A1Q8IZC6 1860 aaPredicted RBP16.46■□□□□ 0.22
COL18A1-205ENST00000423214 RNF103O00237 685 aa16.45■□□□□ 0.22
COL18A1-205ENST00000423214 NEMP1O14524 444 aa16.45■□□□□ 0.22
COL18A1-205ENST00000423214 MT-CO3P00414 261 aa16.45■□□□□ 0.22
COL18A1-205ENST00000423214 L1CAMP32004 1257 aa16.45■□□□□ 0.22
COL18A1-205ENST00000423214 ACTN2P35609 894 aa16.45■□□□□ 0.22
COL18A1-205ENST00000423214 GEMIN4P57678 1058 aaKnown RBP16.45■□□□□ 0.22
COL18A1-205ENST00000423214 CARD16Q5EG05 197 aa16.45■□□□□ 0.22
COL18A1-205ENST00000423214 RWDD4Q6NW29 188 aaKnown RBP16.45■□□□□ 0.22
COL18A1-205ENST00000423214 DPY19L2P1Q6NXN4 242 aa16.45■□□□□ 0.22
COL18A1-205ENST00000423214 Q6ZSR6 202 aa16.45■□□□□ 0.22
COL18A1-205ENST00000423214 ARCQ7LC44 396 aa16.45■□□□□ 0.22
COL18A1-205ENST00000423214 ZNF677Q86XU0 584 aa16.45■□□□□ 0.22
COL18A1-205ENST00000423214 CACTIN-AS1Q8N1I8 211 aa16.45■□□□□ 0.22
COL18A1-205ENST00000423214 EMC1Q8N766 993 aa16.45■□□□□ 0.22
COL18A1-205ENST00000423214 GPT2Q8TD30 523 aa16.45■□□□□ 0.22
COL18A1-205ENST00000423214 FEM1CQ96JP0 617 aa16.45■□□□□ 0.22
COL18A1-205ENST00000423214 BBC3Q96PG8 261 aaPredicted RBP16.45■□□□□ 0.22
COL18A1-205ENST00000423214 NAA15Q9BXJ9 866 aaKnown RBP16.45■□□□□ 0.22
COL18A1-205ENST00000423214 SLC17A9Q9BYT1 436 aa16.45■□□□□ 0.22
COL18A1-205ENST00000423214 PPARGC1AQ9UBK2 798 aaKnown RBP16.45■□□□□ 0.22
COL18A1-205ENST00000423214 TMEM59LQ9UK28 342 aa16.45■□□□□ 0.22
COL18A1-205ENST00000423214 HPCAL4Q9UM19 191 aa16.45■□□□□ 0.22
COL18A1-205ENST00000423214 GCN1Q92616 2671 aaKnown RBP16.45■□□□□ 0.22
COL18A1-205ENST00000423214 AP1G1O43747 822 aa16.44■□□□□ 0.22
COL18A1-205ENST00000423214 ZMPSTE24O75844 475 aa16.44■□□□□ 0.22
COL18A1-205ENST00000423214 TPM2P07951 284 aa16.44■□□□□ 0.22
COL18A1-205ENST00000423214 CKMT1AP12532 417 aa16.44■□□□□ 0.22
COL18A1-205ENST00000423214 EEF1GP26641 437 aaKnown RBP16.44■□□□□ 0.22
COL18A1-205ENST00000423214 SDC4P31431 198 aa16.44■□□□□ 0.22
COL18A1-205ENST00000423214 DUSP3P51452 185 aaPredicted RBP16.44■□□□□ 0.22
COL18A1-205ENST00000423214 SGCGQ13326 291 aa16.44■□□□□ 0.22
COL18A1-205ENST00000423214 POLD3Q15054 466 aaPredicted RBP16.44■□□□□ 0.22
COL18A1-205ENST00000423214 KIF26BQ2KJY2 2108 aa16.44■□□□□ 0.22
COL18A1-205ENST00000423214 TCP11X2Q5H9J9 407 aa16.44■□□□□ 0.22
COL18A1-205ENST00000423214 BNIPLQ7Z465 357 aa16.44■□□□□ 0.22
COL18A1-205ENST00000423214 PARGQ86W56 976 aa16.44■□□□□ 0.22
COL18A1-205ENST00000423214 OR6K2Q8NGY2 324 aa16.44■□□□□ 0.22
COL18A1-205ENST00000423214 FCRL3Q96P31 734 aaPredicted RBP16.44■□□□□ 0.22
COL18A1-205ENST00000423214 GBP4Q96PP9 640 aa16.44■□□□□ 0.22
COL18A1-205ENST00000423214 DEPDC7Q96QD5 511 aa16.44■□□□□ 0.22
COL18A1-205ENST00000423214 DUSP23Q9BVJ7 150 aa16.44■□□□□ 0.22
COL18A1-205ENST00000423214 STK33Q9BYT3 514 aa16.44■□□□□ 0.22
COL18A1-205ENST00000423214 SAMSN1Q9NSI8 373 aaKnown RBP16.44■□□□□ 0.22
COL18A1-205ENST00000423214 HECAQ9UBI9 543 aaPredicted RBP16.44■□□□□ 0.22
COL18A1-205ENST00000423214 ZNF212Q9UDV6 495 aa16.44■□□□□ 0.22
COL18A1-205ENST00000423214 OR12D3Q9UGF7 316 aa16.44■□□□□ 0.22
COL18A1-205ENST00000423214 IPO11Q9UI26 975 aaKnown RBP16.44■□□□□ 0.22
COL18A1-205ENST00000423214 FADS3Q9Y5Q0 445 aa16.44■□□□□ 0.22
COL18A1-205ENST00000423214 HS3ST3A1Q9Y663 406 aa16.44■□□□□ 0.22
COL18A1-205ENST00000423214 FPGTO14772 594 aa16.43■□□□□ 0.22
COL18A1-205ENST00000423214 ZNF821O75541 412 aaPredicted RBP16.43■□□□□ 0.22
COL18A1-205ENST00000423214 GFPT2O94808 682 aa16.43■□□□□ 0.22
COL18A1-205ENST00000423214 PAK4O96013 591 aaPredicted RBP16.43■□□□□ 0.22
COL18A1-205ENST00000423214 RABIFP47224 123 aa16.43■□□□□ 0.22
COL18A1-205ENST00000423214 MAPKAPK2P49137 400 aa16.43■□□□□ 0.22
COL18A1-205ENST00000423214 C15orf59Q2T9L4 293 aaPredicted RBP16.43■□□□□ 0.22
COL18A1-205ENST00000423214 TBC1D25Q3MII6 688 aa16.43■□□□□ 0.22
COL18A1-205ENST00000423214 ZNF542PQ5EBM4 170 aa16.43■□□□□ 0.22
COL18A1-205ENST00000423214 ZNF354CQ86Y25 554 aa16.43■□□□□ 0.22
COL18A1-205ENST00000423214 SLC20A1Q8WUM9 679 aa16.43■□□□□ 0.22
COL18A1-205ENST00000423214 FGF11Q92914 225 aa16.43■□□□□ 0.22
COL18A1-205ENST00000423214 RAB7BQ96AH8 199 aa16.43■□□□□ 0.22
COL18A1-205ENST00000423214 ISG20Q96AZ6 181 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms