RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 CARD16Q5EG05 197 aa17.7■□□□□ 0.42
MSH6-203ENST00000420813 FKBP15Q5T1M5 1219 aa17.7■□□□□ 0.42
MSH6-203ENST00000420813 HES3Q5TGS1 186 aa17.7■□□□□ 0.42
MSH6-203ENST00000420813 KIAA1161Q6NSJ0 714 aa17.7■□□□□ 0.42
MSH6-203ENST00000420813 PDZD3Q86UT5 571 aa17.7■□□□□ 0.42
MSH6-203ENST00000420813 RXFP2Q8WXD0 754 aa17.7■□□□□ 0.42
MSH6-203ENST00000420813 RFFLQ8WZ73 363 aa17.7■□□□□ 0.42
MSH6-203ENST00000420813 KLK6Q92876 244 aa17.7■□□□□ 0.42
MSH6-203ENST00000420813 IFT43Q96FT9 208 aa17.7■□□□□ 0.42
MSH6-203ENST00000420813 MYOCQ99972 504 aa17.7■□□□□ 0.42
MSH6-203ENST00000420813 FAM207AQ9NSI2 230 aaPredicted RBP17.7■□□□□ 0.42
MSH6-203ENST00000420813 IGSF10Q6WRI0 2623 aa17.69■□□□□ 0.42
MSH6-203ENST00000420813 BAHCC1Q9P281 2608 aa17.69■□□□□ 0.42
MSH6-203ENST00000420813 AP1G1O43747 822 aa17.69■□□□□ 0.42
MSH6-203ENST00000420813 SDC3O75056 442 aa17.69■□□□□ 0.42
MSH6-203ENST00000420813 CD160O95971 181 aa17.69■□□□□ 0.42
MSH6-203ENST00000420813 ADRB3P13945 408 aa17.69■□□□□ 0.42
MSH6-203ENST00000420813 HOXB3P14651 431 aaPredicted RBP17.69■□□□□ 0.42
MSH6-203ENST00000420813 RHOQP17081 205 aa17.69■□□□□ 0.42
MSH6-203ENST00000420813 DGKAP23743 735 aa17.69■□□□□ 0.42
MSH6-203ENST00000420813 RPS21P63220 83 aaKnown RBP17.69■□□□□ 0.42
MSH6-203ENST00000420813 CDO1Q16878 200 aa17.69■□□□□ 0.42
MSH6-203ENST00000420813 C15orf59Q2T9L4 293 aaPredicted RBP17.69■□□□□ 0.42
MSH6-203ENST00000420813 CCDC14Q49A88 953 aa17.69■□□□□ 0.42
MSH6-203ENST00000420813 HS1BP3Q53T59 392 aa17.69■□□□□ 0.42
MSH6-203ENST00000420813 SEL1L3Q68CR1 1132 aa17.69■□□□□ 0.42
MSH6-203ENST00000420813 GCNT7Q6ZNI0 430 aa17.69■□□□□ 0.42
MSH6-203ENST00000420813 NLRP14Q86W24 1093 aa17.69■□□□□ 0.42
MSH6-203ENST00000420813 DCP2Q8IU60 420 aaKnown RBP17.69■□□□□ 0.42
MSH6-203ENST00000420813 SLC25A45Q8N413 288 aa17.69■□□□□ 0.42
MSH6-203ENST00000420813 OR13H1Q8NG92 308 aa17.69■□□□□ 0.42
MSH6-203ENST00000420813 OR4C6Q8NH72 309 aa17.69■□□□□ 0.42
MSH6-203ENST00000420813 CENPIQ92674 756 aaPredicted RBP17.69■□□□□ 0.42
MSH6-203ENST00000420813 LRIG1Q96JA1 1093 aa17.69■□□□□ 0.42
MSH6-203ENST00000420813 C11orf70Q9BRQ4 267 aa17.69■□□□□ 0.42
MSH6-203ENST00000420813 CALN1Q9BXU9 219 aa17.69■□□□□ 0.42
MSH6-203ENST00000420813 NRSN2Q9GZP1 204 aa17.69■□□□□ 0.42
MSH6-203ENST00000420813 FZD3Q9NPG1 666 aa17.69■□□□□ 0.42
MSH6-203ENST00000420813 NLRC4Q9NPP4 1024 aa17.69■□□□□ 0.42
MSH6-203ENST00000420813 TMEM248Q9NWD8 314 aa17.69■□□□□ 0.42
MSH6-203ENST00000420813 SIK3Q9Y2K2 1263 aa17.69■□□□□ 0.42
MSH6-203ENST00000420813 FCF1Q9Y324 198 aaKnown RBP17.69■□□□□ 0.42
MSH6-203ENST00000420813 HS3ST3A1Q9Y663 406 aa17.69■□□□□ 0.42
MSH6-203ENST00000420813 A6NNZ2 444 aa17.68■□□□□ 0.42
MSH6-203ENST00000420813 TRIM38O00635 465 aa17.68■□□□□ 0.42
MSH6-203ENST00000420813 EPHB6O15197 1021 aa17.68■□□□□ 0.42
MSH6-203ENST00000420813 SIGLEC6O43699 453 aa17.68■□□□□ 0.42
MSH6-203ENST00000420813 UNGP13051 313 aaPredicted RBP17.68■□□□□ 0.42
MSH6-203ENST00000420813 ACVRL1P37023 503 aa17.68■□□□□ 0.42
MSH6-203ENST00000420813 STAT1P42224 750 aa17.68■□□□□ 0.42
MSH6-203ENST00000420813 KLK7P49862 253 aa17.68■□□□□ 0.42
MSH6-203ENST00000420813 DNA2P51530 1060 aa17.68■□□□□ 0.42
MSH6-203ENST00000420813 TARDBPQ13148 414 aaKnown RBP eCLIP17.68■□□□□ 0.423e-8■■■■■ 32.2
MSH6-203ENST00000420813 RAB6CQ53S08 254 aa17.68■□□□□ 0.42
MSH6-203ENST00000420813 RBM43Q6ZSC3 357 aaKnown RBP17.68■□□□□ 0.42
MSH6-203ENST00000420813 PARS2Q7L3T8 475 aaKnown RBP17.68■□□□□ 0.42
MSH6-203ENST00000420813 JOSD2Q8TAC2 188 aa17.68■□□□□ 0.42
MSH6-203ENST00000420813 SLC30A5Q8TAD4 765 aa17.68■□□□□ 0.42
MSH6-203ENST00000420813 HNRNPLLQ8WVV9 542 aaKnown RBP17.68■□□□□ 0.42
MSH6-203ENST00000420813 ARHGEF2Q92974 986 aaKnown RBP17.68■□□□□ 0.42
MSH6-203ENST00000420813 NTAN1Q96AB6 310 aa17.68■□□□□ 0.42
MSH6-203ENST00000420813 RAB7BQ96AH8 199 aa17.68■□□□□ 0.42
MSH6-203ENST00000420813 FEM1CQ96JP0 617 aa17.68■□□□□ 0.42
MSH6-203ENST00000420813 SLC17A9Q9BYT1 436 aa17.68■□□□□ 0.42
MSH6-203ENST00000420813 RAB6CQ9H0N0 254 aa17.68■□□□□ 0.42
MSH6-203ENST00000420813 MAGEH1Q9H213 219 aa17.68■□□□□ 0.42
MSH6-203ENST00000420813 GPR27Q9NS67 375 aa17.68■□□□□ 0.42
MSH6-203ENST00000420813 LMBRD1Q9NUN5 540 aa17.68■□□□□ 0.42
MSH6-203ENST00000420813 NEU3Q9UQ49 428 aa17.68■□□□□ 0.42
MSH6-203ENST00000420813 FADS3Q9Y5Q0 445 aa17.68■□□□□ 0.42
MSH6-203ENST00000420813 FASNP49327 2511 aaKnown RBP17.68■□□□□ 0.42
MSH6-203ENST00000420813 PIAS2O75928 621 aa17.67■□□□□ 0.42
MSH6-203ENST00000420813 LRIG2O94898 1065 aa17.67■□□□□ 0.42
MSH6-203ENST00000420813 KRT3P12035 628 aa17.67■□□□□ 0.42
MSH6-203ENST00000420813 NSFP46459 744 aaKnown RBP17.67■□□□□ 0.42
MSH6-203ENST00000420813 HDAC4P56524 1084 aa17.67■□□□□ 0.42
MSH6-203ENST00000420813 CLDN6P56747 220 aa17.67■□□□□ 0.42
MSH6-203ENST00000420813 CLDN2P57739 230 aa17.67■□□□□ 0.42
MSH6-203ENST00000420813 E2F1Q01094 437 aa17.67■□□□□ 0.42
MSH6-203ENST00000420813 PTP4A2Q12974 167 aa17.67■□□□□ 0.42
MSH6-203ENST00000420813 RTP5Q14D33 572 aa17.67■□□□□ 0.42
MSH6-203ENST00000420813 RWDD4Q6NW29 188 aaKnown RBP17.67■□□□□ 0.42
MSH6-203ENST00000420813 KYAT3Q6YP21 454 aaKnown RBP17.67■□□□□ 0.42
MSH6-203ENST00000420813 SLC22A18ASQ8N1D0 253 aa17.67■□□□□ 0.42
MSH6-203ENST00000420813 GPT2Q8TD30 523 aa17.67■□□□□ 0.42
MSH6-203ENST00000420813 TBC1D31Q96DN5 1066 aa17.67■□□□□ 0.42
MSH6-203ENST00000420813 TM6SF2Q9BZW4 377 aa17.67■□□□□ 0.42
MSH6-203ENST00000420813 ZDHHC6Q9H6R6 413 aa17.67■□□□□ 0.42
MSH6-203ENST00000420813 NDFIP2Q9NV92 336 aa17.67■□□□□ 0.42
MSH6-203ENST00000420813 HECAQ9UBI9 543 aaPredicted RBP17.67■□□□□ 0.42
MSH6-203ENST00000420813 HPCAL4Q9UM19 191 aa17.67■□□□□ 0.42
MSH6-203ENST00000420813 ASXL3Q9C0F0 2248 aa17.67■□□□□ 0.42
MSH6-203ENST00000420813 ZSCAN5CA6NGD5 496 aaPredicted RBP17.66■□□□□ 0.42
MSH6-203ENST00000420813 FAM72CH0Y354 149 aa17.66■□□□□ 0.42
MSH6-203ENST00000420813 TSPAN6O43657 245 aa17.66■□□□□ 0.42
MSH6-203ENST00000420813 RAMP2O60895 175 aa17.66■□□□□ 0.42
MSH6-203ENST00000420813 GSRP00390 522 aa17.66■□□□□ 0.42
MSH6-203ENST00000420813 PLEKP08567 350 aaPredicted RBP17.66■□□□□ 0.42
MSH6-203ENST00000420813 ALPPL2P10696 532 aa17.66■□□□□ 0.42
MSH6-203ENST00000420813 DAB2P98082 770 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms