RNA–Protein interactions for RNA: ENST00000413184.6

CPSF7-203, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-203ENST00000413184 ERV3-1Q14264 604 aa7.4□□□□□ -1.22
CPSF7-203ENST00000413184 FAM187BQ17R55 369 aa7.4□□□□□ -1.22
CPSF7-203ENST00000413184 KNOP1Q1ED39 458 aaKnown RBP7.4□□□□□ -1.22
CPSF7-203ENST00000413184 ZNF542PQ5EBM4 170 aa7.4□□□□□ -1.22
CPSF7-203ENST00000413184 CCDC122Q5T0U0 273 aa7.4□□□□□ -1.22
CPSF7-203ENST00000413184 PHF19Q5T6S3 580 aa7.4□□□□□ -1.22
CPSF7-203ENST00000413184 ZNF776Q68DI1 518 aaPredicted RBP7.4□□□□□ -1.22
CPSF7-203ENST00000413184 RRAGAQ7L523 313 aa7.4□□□□□ -1.22
CPSF7-203ENST00000413184 KDELC2Q7Z4H8 507 aa7.4□□□□□ -1.22
CPSF7-203ENST00000413184 THEM5Q8N1Q8 247 aa7.4□□□□□ -1.22
CPSF7-203ENST00000413184 SDR16C5Q8N3Y7 309 aa7.4□□□□□ -1.22
CPSF7-203ENST00000413184 ZNF366Q8N895 744 aa7.4□□□□□ -1.22
CPSF7-203ENST00000413184 CEP120Q8N960 986 aa7.4□□□□□ -1.22
CPSF7-203ENST00000413184 ZNF548Q8NEK5 533 aaPredicted RBP7.4□□□□□ -1.22
CPSF7-203ENST00000413184 BHMTQ93088 406 aa7.4□□□□□ -1.22
CPSF7-203ENST00000413184 NACC1Q96RE7 527 aa7.4□□□□□ -1.22
CPSF7-203ENST00000413184 IL12RB2Q99665 862 aa7.4□□□□□ -1.22
CPSF7-203ENST00000413184 TCHPQ9BT92 498 aa7.4□□□□□ -1.22
CPSF7-203ENST00000413184 TARS2Q9BW92 718 aaKnown RBP7.4□□□□□ -1.22
CPSF7-203ENST00000413184 TRIM55Q9BYV6 548 aa7.4□□□□□ -1.22
CPSF7-203ENST00000413184 CIPCQ9C0C6 399 aa7.4□□□□□ -1.22
CPSF7-203ENST00000413184 LACRTQ9GZZ8 138 aa7.4□□□□□ -1.22
CPSF7-203ENST00000413184 NEUROG2Q9H2A3 272 aa7.4□□□□□ -1.22
CPSF7-203ENST00000413184 GANQ9H2C0 597 aa7.4□□□□□ -1.22
CPSF7-203ENST00000413184 FBRSQ9HAH7 460 aa7.4□□□□□ -1.22
CPSF7-203ENST00000413184 DNAJC28Q9NX36 388 aa7.4□□□□□ -1.22
CPSF7-203ENST00000413184 TUBGCP4Q9UGJ1 667 aa7.4□□□□□ -1.22
CPSF7-203ENST00000413184 CA5BQ9Y2D0 317 aa7.4□□□□□ -1.22
CPSF7-203ENST00000413184 ZNF451Q9Y4E5 1061 aa7.4□□□□□ -1.22
CPSF7-203ENST00000413184 PCDHGB7Q9Y5F8 929 aa7.4□□□□□ -1.22
CPSF7-203ENST00000413184 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.4□□□□□ -1.22
CPSF7-203ENST00000413184 MRPS18BQ9Y676 258 aaKnown RBP7.4□□□□□ -1.22
CPSF7-203ENST00000413184 COPG1Q9Y678 874 aaKnown RBP7.4□□□□□ -1.22
CPSF7-203ENST00000413184 A0A1W2PP55 124 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 A0A1W2PQM1 296 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 PDXKO00764 312 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 CLIC2O15247 247 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 TGFB1I1O43294 461 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 CALUO43852 315 aaPredicted RBP7.39□□□□□ -1.23
CPSF7-203ENST00000413184 RNASEH2AO75792 299 aaKnown RBP7.39□□□□□ -1.23
CPSF7-203ENST00000413184 GCNT3O95395 438 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 LCA5LO95447 670 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 OLFM2O95897 454 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 NR3C1P04150 777 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 NR2F2P24468 414 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 MAP4P27816 1152 aaKnown RBP7.39□□□□□ -1.23
CPSF7-203ENST00000413184 KIR3DL1P43629 444 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 CASP4P49662 377 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 KIF11P52732 1056 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 PPP2CBP62714 309 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 PPP2CAP67775 309 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 APBA1Q02410 837 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 FOXM1Q08050 763 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 MAPK7Q13164 816 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 TUBB2AQ13885 445 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 GEN1Q17RS7 908 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 WHAMMP3Q1A5X7 153 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 DCAF10Q5QP82 559 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 HGSNATQ68CP4 663 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 DPY19L2P1Q6NXN4 242 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 C16orf47Q6ZP98 133 aaPredicted RBP7.39□□□□□ -1.23
CPSF7-203ENST00000413184 OTUD6AQ7L8S5 288 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 NLGN4XQ8N0W4 816 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 TMEM130Q8N3G9 435 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 CEP112Q8N8E3 955 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 NLGN4YQ8NFZ3 816 aaPredicted RBP7.39□□□□□ -1.23
CPSF7-203ENST00000413184 UBE2Q2Q8WVN8 375 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 SORCS1Q8WY21 1168 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 PMEPA1Q969W9 287 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 ALPK1Q96QP1 1244 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 FIZ1Q96SL8 496 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 SPOCK3Q9BQ16 436 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 TUBB2BQ9BVA1 445 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 CALN1Q9BXU9 219 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 IKZF4Q9H2S9 585 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 PABPC3Q9H361 631 aaKnown RBP7.39□□□□□ -1.23
CPSF7-203ENST00000413184 ZSWIM4Q9H7M6 989 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 NLRC4Q9NPP4 1024 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 OLFML3Q9NRN5 406 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 AGPAT4Q9NRZ5 378 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 ZNF446Q9NWS9 450 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 CNTN3Q9P232 1028 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 SERGEFQ9UGK8 458 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 PADI4Q9UM07 663 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 SCML1Q9UN30 329 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 PCDHGA9Q9Y5G4 932 aaKnown RBP7.39□□□□□ -1.23
CPSF7-203ENST00000413184 PCDHGA3Q9Y5H0 932 aa7.39□□□□□ -1.23
CPSF7-203ENST00000413184 TBC1D3DA0A087WVF3 549 aa7.38□□□□□ -1.23
CPSF7-203ENST00000413184 TBC1D3IA0A087WXS9 549 aa7.38□□□□□ -1.23
CPSF7-203ENST00000413184 TBC1D3EA0A087X179 549 aa7.38□□□□□ -1.23
CPSF7-203ENST00000413184 TBC1D3KA0A087X1G2 549 aa7.38□□□□□ -1.23
CPSF7-203ENST00000413184 SSU72P8A0A1W2PR75 194 aa7.38□□□□□ -1.23
CPSF7-203ENST00000413184 CDC14CA4D256 554 aa7.38□□□□□ -1.23
CPSF7-203ENST00000413184 ARHGEF35A5YM69 484 aa7.38□□□□□ -1.23
CPSF7-203ENST00000413184 TBC1D3FA6NER0 549 aaPredicted RBP7.38□□□□□ -1.23
CPSF7-203ENST00000413184 TBC1D3LB9A6J9 549 aa7.38□□□□□ -1.23
CPSF7-203ENST00000413184 EIF3DO15371 548 aaKnown RBP eCLIP7.38□□□□□ -1.23
CPSF7-203ENST00000413184 SLC16A3O15427 465 aaKnown RBP7.38□□□□□ -1.23
CPSF7-203ENST00000413184 CRLF1O75462 422 aa7.38□□□□□ -1.23
CPSF7-203ENST00000413184 IPO7O95373 1038 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms