RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 MNAT1P51948 309 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 KPNA2P52292 529 aaKnown RBP11.56□□□□□ -0.56
SNX13-202ENST00000409604 FAM109BQ6ICB4 259 aaPredicted RBP11.56□□□□□ -0.56
SNX13-202ENST00000409604 NEPROQ6NW34 567 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 OTOAQ7RTW8 1153 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 RNF217Q8TC41 542 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 TIFAQ96CG3 184 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 PSMD3O43242 534 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 CLDN11O75508 207 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 DGKIO75912 1065 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 RALBP11234 206 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 PSMD8P48556 350 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 STK19P49842 368 aaPredicted RBP11.56□□□□□ -0.56
SNX13-202ENST00000409604 ALDH18A1P54886 795 aaKnown RBP11.56□□□□□ -0.56
SNX13-202ENST00000409604 SNRPD1P62314 119 aaKnown RBP11.56□□□□□ -0.56
SNX13-202ENST00000409604 CDK18Q07002 472 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 TRIP4Q15650 581 aaPredicted RBP11.56□□□□□ -0.56
SNX13-202ENST00000409604 PDCD2Q16342 344 aaPredicted RBP11.56□□□□□ -0.56
SNX13-202ENST00000409604 UGP2Q16851 508 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 Q6ZVU0 165 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 PIK3R5Q8WYR1 880 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 TNS1Q9HBL0 1735 aaKnown RBP11.56□□□□□ -0.56
SNX13-202ENST00000409604 OR51F1A6NGY5 319 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 CPA2P48052 419 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 PPP3CCP48454 512 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 CREMQ03060 361 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 ZMIZ2Q8NF64 920 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 OR4K2Q8NGD2 314 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 SERPINB12Q96P63 405 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 TRIM55Q9BYV6 548 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 LRRC19Q9H756 370 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 PNMA8BQ9ULN7 279 aaPredicted RBP11.55□□□□□ -0.56
SNX13-202ENST00000409604 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.55□□□□□ -0.56
SNX13-202ENST00000409604 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.55□□□□□ -0.56
SNX13-202ENST00000409604 HEATR9A2RTY3 570 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 MTX2O75431 263 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 STMN1P16949 149 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 STX1BP61266 288 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 DLG2Q15700 870 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 TMCO4Q5TGY1 634 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 WDR93Q6P2C0 686 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 CRTC3Q6UUV7 619 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 LAYNQ6UX15 382 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 GSTCDQ8NEC7 633 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 STMN2Q93045 179 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 ABHD8Q96I13 439 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 HERPUD2Q9BSE4 406 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 GLOD4Q9HC38 313 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 CAPN10Q9HC96 672 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 A0A1B0GVM2 712 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 TCAF2A6NFQ2 919 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 PRPF4O43172 522 aaKnown RBP eCLIP11.55□□□□□ -0.56
SNX13-202ENST00000409604 HSPA9P38646 679 aaKnown RBP11.55□□□□□ -0.56
SNX13-202ENST00000409604 MGAT5Q09328 741 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 PTK6Q13882 451 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 SETMARQ53H47 684 aaPredicted RBP11.55□□□□□ -0.56
SNX13-202ENST00000409604 FNBP1LQ5T0N5 605 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 ADGRF1Q5T601 910 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 ATG16L1Q676U5 607 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 RAET1GQ6H3X3 334 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 CNSTQ6PJW8 725 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 FNIP1Q8TF40 1166 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 CCDC124Q96CT7 223 aaKnown RBP11.55□□□□□ -0.56
SNX13-202ENST00000409604 TBATAQ96M53 351 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 CLSTN3Q9BQT9 956 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 TMEM175Q9BSA9 504 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 AASDHPPTQ9NRN7 309 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 TRHDEQ9UKU6 1024 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 INVSQ9Y283 1065 aa11.55□□□□□ -0.56
SNX13-202ENST00000409604 ATP8B1O43520 1251 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 SMIM24O75264 130 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 ADH1CP00326 375 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 H2AFXP16104 143 aaPredicted RBP11.54□□□□□ -0.56
SNX13-202ENST00000409604 GLDCP23378 1020 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 DGKGP49619 791 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 PGGT1BP53609 377 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 SMARCB1Q12824 385 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 PLA2G4EQ3MJ16 856 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 TPGS2Q68CL5 300 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 DCBLD1Q8N8Z6 715 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 SNX31Q8N9S9 440 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 OR52K2Q8NGK3 314 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 OR14C36Q8NHC7 312 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 ANKRD7Q92527 254 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 TSPAN18Q96SJ8 248 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 ACAT2Q9BWD1 397 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 TRIP12Q14669 1992 aaPredicted RBP11.54□□□□□ -0.56
SNX13-202ENST00000409604 PMM2O15305 246 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 ALPIP09923 528 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 MZF1P28698 734 aaPredicted RBP11.54□□□□□ -0.56
SNX13-202ENST00000409604 MLLT6P55198 1093 aaPredicted RBP11.54□□□□□ -0.56
SNX13-202ENST00000409604 SPRED2Q7Z698 418 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 CALML6Q8TD86 181 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 SLC9A7Q96T83 725 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 ADAM7Q9H2U9 754 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 CNOT10Q9H9A5 744 aaKnown RBP11.54□□□□□ -0.56
SNX13-202ENST00000409604 KIAA1522Q9P206 1035 aaPredicted RBP11.54□□□□□ -0.56
SNX13-202ENST00000409604 RAI2Q9Y5P3 530 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 HCFC2Q9Y5Z7 792 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 CENPFP49454 3210 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms