RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 BNIP3LO60238 219 aa14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 ZNF821O75541 412 aaPredicted RBP14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 POP4O95707 220 aaKnown RBP14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 SERPINC1P01008 464 aa14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 ZNF135P52742 658 aaPredicted RBP14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 SNRPD1P62314 119 aaKnown RBP14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 RAD51Q06609 339 aa14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 LINGO4Q6UY18 593 aa14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 DPY19L3Q6ZPD9 716 aa14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 PHLDB2Q86SQ0 1253 aa14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 DCP2Q8IU60 420 aaKnown RBP14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 PSTKQ8IV42 348 aaKnown RBP14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 KDF1Q8NAX2 398 aaPredicted RBP14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 FNIP1Q8TF40 1166 aa14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 RAB7BQ96AH8 199 aa14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 TRIM11Q96F44 468 aa14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 FEM1CQ96JP0 617 aa14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 SLC6A18Q96N87 628 aa14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 CAMK1GQ96NX5 476 aa14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 SYT11Q9BT88 431 aa14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 OSBPL1AQ9BXW6 950 aa14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 SLCO1B1Q9Y6L6 691 aa14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 DOCK4Q8N1I0 1966 aa14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 CHD8Q9HCK8 2581 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 AP1G1O43747 822 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 LEFTY1O75610 366 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 RNF8O76064 485 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 GSRP00390 522 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 CTSLP07711 333 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 C1SP09871 688 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 FTH1P19P0C7X4 201 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 MYBL1P10243 752 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 ITGB7P26010 798 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 EPHB2P29323 1055 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 NXPH1P58417 271 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 RPL7AP62424 266 aaKnown RBP14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 FAM193AP78312 1265 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 ARF5P84085 180 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 MAMLD1Q13495 774 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 ACAP1Q15027 740 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 IQCB1Q15051 598 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 ASIC2Q16515 512 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 PARP15Q460N3 678 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 PIP5KL1Q5T9C9 394 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 PLEKHA7Q6IQ23 1121 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 SCYL2Q6P3W7 929 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 UNQ6494/PRO21346Q6UXR6 183 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 HORMAD1Q86X24 394 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 CCDC185Q8N715 623 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 RTL3Q8N8U3 475 aaKnown RBP14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 SYN2Q92777 582 aaPredicted RBP14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 ARHGEF26Q96DR7 871 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 MCEEQ96PE7 176 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 FUCA2Q9BTY2 467 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 HAUS4Q9H6D7 363 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 MRPL47Q9HD33 250 aaKnown RBP14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 DNAI1Q9UI46 699 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 FZD10Q9ULW2 581 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 HS3ST3A1Q9Y663 406 aa14.81□□□□□ -0.04
NIF3L1-205ENST00000409588 EPG5Q9HCE0 2579 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 CEP295Q9C0D2 2601 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 A0A1W2PQJ5 194 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 LRRC53A6NM62 1247 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 FAM72CH0Y354 149 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 CCP110O43303 1012 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 DKK1O94907 266 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 WNT1P04628 370 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 ITGAVP06756 1048 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 NUMBP49757 651 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 DNA2P51530 1060 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 NEK3P51956 506 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 TAS2R38P59533 333 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 RPS21P63220 83 aaKnown RBP14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 KLHL30Q0D2K2 578 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 GRM3Q14832 879 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 KCNT1Q5JUK3 1230 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 FAM72AQ5TYM5 149 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 FAM72DQ6L9T8 149 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 KIAA1161Q6NSJ0 714 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 FBXL19Q6PCT2 694 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 TMC6Q7Z403 805 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 VPS36Q86VN1 386 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 FAM72BQ86X60 149 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 UMODL1-AS1Q8N2C9 162 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 OR2AP1Q8NGE2 309 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 HCAR2Q8TDS4 363 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 SAP25Q8TEE9 199 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 ASB12Q8WXK4 309 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 IFT43Q96FT9 208 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 KLHDC7BQ96G42 594 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 MFHAS1Q9Y4C4 1052 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 PCDHGA1Q9Y5H4 931 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 SCINQ9Y6U3 715 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 WASF2Q9Y6W5 498 aa14.8□□□□□ -0.04
NIF3L1-205ENST00000409588 TMEM191CA6NGB0 347 aa14.79□□□□□ -0.04
NIF3L1-205ENST00000409588 TSPAN6O43657 245 aa14.79□□□□□ -0.04
NIF3L1-205ENST00000409588 HYAL3O43820 417 aaPredicted RBP14.79□□□□□ -0.04
NIF3L1-205ENST00000409588 CD160O95971 181 aa14.79□□□□□ -0.04
NIF3L1-205ENST00000409588 FTLP02792 175 aaPredicted RBP14.79□□□□□ -0.04
NIF3L1-205ENST00000409588 HNRNPA2B1P22626 353 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms