RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 STK10O94804 968 aaKnown RBP16.81■□□□□ 0.28
TSPAN4-208ENST00000409531 CHRM1P11229 460 aaPredicted RBP16.81■□□□□ 0.28
TSPAN4-208ENST00000409531 CNR2P34972 360 aa16.81■□□□□ 0.28
TSPAN4-208ENST00000409531 FNTBP49356 437 aa16.81■□□□□ 0.28
TSPAN4-208ENST00000409531 CLCN6P51797 869 aa16.81■□□□□ 0.28
TSPAN4-208ENST00000409531 ST8SIA6P61647 398 aa16.81■□□□□ 0.28
TSPAN4-208ENST00000409531 ARF5P84085 180 aa16.81■□□□□ 0.28
TSPAN4-208ENST00000409531 SNX1Q13596 522 aa16.81■□□□□ 0.28
TSPAN4-208ENST00000409531 OASLQ15646 514 aaKnown RBP16.81■□□□□ 0.28
TSPAN4-208ENST00000409531 TMEM215Q68D42 235 aa16.81■□□□□ 0.28
TSPAN4-208ENST00000409531 LONP2Q86WA8 852 aa16.81■□□□□ 0.28
TSPAN4-208ENST00000409531 ALLCQ8N6M5 410 aa16.81■□□□□ 0.28
TSPAN4-208ENST00000409531 ZNF513Q8N8E2 541 aaPredicted RBP16.81■□□□□ 0.28
TSPAN4-208ENST00000409531 KDM1BQ8NB78 822 aa16.81■□□□□ 0.28
TSPAN4-208ENST00000409531 TXNDC5Q8NBS9 432 aaKnown RBP16.81■□□□□ 0.28
TSPAN4-208ENST00000409531 SPATA4Q8NEY3 305 aa16.81■□□□□ 0.28
TSPAN4-208ENST00000409531 ATL2Q8NHH9 583 aa16.81■□□□□ 0.28
TSPAN4-208ENST00000409531 GRK7Q8WTQ7 553 aa16.81■□□□□ 0.28
TSPAN4-208ENST00000409531 HTR3CQ8WXA8 447 aa16.81■□□□□ 0.28
TSPAN4-208ENST00000409531 VAT1Q99536 393 aa16.81■□□□□ 0.28
TSPAN4-208ENST00000409531 PDFQ9HBH1 243 aa16.81■□□□□ 0.28
TSPAN4-208ENST00000409531 ERVW-1Q9UQF0 538 aa16.81■□□□□ 0.28
TSPAN4-208ENST00000409531 HS3ST2Q9Y278 367 aa16.81■□□□□ 0.28
TSPAN4-208ENST00000409531 KLF8O95600 359 aaPredicted RBP16.8■□□□□ 0.28
TSPAN4-208ENST00000409531 LMNAP02545 664 aaKnown RBP16.8■□□□□ 0.28
TSPAN4-208ENST00000409531 CCNB1P14635 433 aa16.8■□□□□ 0.28
TSPAN4-208ENST00000409531 GLDCP23378 1020 aa16.8■□□□□ 0.28
TSPAN4-208ENST00000409531 RBL1P28749 1068 aa16.8■□□□□ 0.28
TSPAN4-208ENST00000409531 COILP38432 576 aaPredicted RBP16.8■□□□□ 0.28
TSPAN4-208ENST00000409531 NUMBP49757 651 aa16.8■□□□□ 0.28
TSPAN4-208ENST00000409531 SERPINH1P50454 418 aaKnown RBP16.8■□□□□ 0.28
TSPAN4-208ENST00000409531 IFI35P80217 286 aaPredicted RBP16.8■□□□□ 0.28
TSPAN4-208ENST00000409531 DMWDQ09019 674 aa16.8■□□□□ 0.28
TSPAN4-208ENST00000409531 CRY1Q16526 586 aa16.8■□□□□ 0.28
TSPAN4-208ENST00000409531 EOGTQ5NDL2 527 aa16.8■□□□□ 0.28
TSPAN4-208ENST00000409531 MARC1Q5VT66 337 aa16.8■□□□□ 0.28
TSPAN4-208ENST00000409531 CCDC137Q6PK04 289 aaKnown RBP16.8■□□□□ 0.28
TSPAN4-208ENST00000409531 TRMT11Q7Z4G4 463 aaKnown RBP16.8■□□□□ 0.28
TSPAN4-208ENST00000409531 MAML1Q92585 1016 aa16.8■□□□□ 0.28
TSPAN4-208ENST00000409531 CCDC114Q96M63 670 aa16.8■□□□□ 0.28
TSPAN4-208ENST00000409531 TMEM121Q9BTD3 319 aa16.8■□□□□ 0.28
TSPAN4-208ENST00000409531 L2HGDHQ9H9P8 463 aa16.8■□□□□ 0.28
TSPAN4-208ENST00000409531 AMACRQ9UHK6 382 aa16.8■□□□□ 0.28
TSPAN4-208ENST00000409531 HCN2Q9UL51 889 aa16.8■□□□□ 0.28
TSPAN4-208ENST00000409531 CTAGE15A4D2H0 777 aa16.79■□□□□ 0.28
TSPAN4-208ENST00000409531 SGK1O00141 431 aa16.79■□□□□ 0.28
TSPAN4-208ENST00000409531 KCNN4O15554 427 aa16.79■□□□□ 0.28
TSPAN4-208ENST00000409531 GFRA3O60609 400 aa16.79■□□□□ 0.28
TSPAN4-208ENST00000409531 APBB3O95704 486 aa16.79■□□□□ 0.28
TSPAN4-208ENST00000409531 CTAGE8P0CG41 777 aa16.79■□□□□ 0.28
TSPAN4-208ENST00000409531 ACTN2P35609 894 aa16.79■□□□□ 0.28
TSPAN4-208ENST00000409531 DGKEP52429 567 aa16.79■□□□□ 0.28
TSPAN4-208ENST00000409531 ZNF235Q14590 738 aa16.79■□□□□ 0.28
TSPAN4-208ENST00000409531 LBRQ14739 615 aaKnown RBP16.79■□□□□ 0.28
TSPAN4-208ENST00000409531 LINGO4Q6UY18 593 aa16.79■□□□□ 0.28
TSPAN4-208ENST00000409531 ASCL5Q7RTU5 278 aa16.79■□□□□ 0.28
TSPAN4-208ENST00000409531 GSTA5Q7RTV2 222 aa16.79■□□□□ 0.28
TSPAN4-208ENST00000409531 CTAGE6Q86UF2 777 aa16.79■□□□□ 0.28
TSPAN4-208ENST00000409531 WDR5BQ86VZ2 330 aa16.79■□□□□ 0.28
TSPAN4-208ENST00000409531 CTAGE4Q8IX94 777 aa16.79■□□□□ 0.28
TSPAN4-208ENST00000409531 SH2D3CQ8N5H7 860 aa16.79■□□□□ 0.28
TSPAN4-208ENST00000409531 ATP11CQ8NB49 1132 aa16.79■□□□□ 0.28
TSPAN4-208ENST00000409531 RPL10LQ96L21 214 aaKnown RBP16.79■□□□□ 0.28
TSPAN4-208ENST00000409531 CINPQ9BW66 212 aaPredicted RBP16.79■□□□□ 0.28
TSPAN4-208ENST00000409531 CEP44Q9C0F1 390 aa16.79■□□□□ 0.28
TSPAN4-208ENST00000409531 SEPT10Q9P0V9 454 aa16.79■□□□□ 0.28
TSPAN4-208ENST00000409531 SEPT3Q9UH03 358 aa16.79■□□□□ 0.28
TSPAN4-208ENST00000409531 EBF1Q9UH73 591 aa16.79■□□□□ 0.28
TSPAN4-208ENST00000409531 TRHDEQ9UKU6 1024 aa16.79■□□□□ 0.28
TSPAN4-208ENST00000409531 VPS13AQ96RL7 3174 aa16.79■□□□□ 0.28
TSPAN4-208ENST00000409531 MUC22E2RYF6 1773 aaPredicted RBP16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 PRR23AA6NEV1 266 aa16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 KCNK1O00180 336 aa16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 HRO43593 1189 aa16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 ADAM23O75077 832 aa16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 GAS8O95995 478 aa16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 PEX11BO96011 259 aa16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 HNRNPLP14866 589 aaKnown RBP eCLIP16.78■□□□□ 0.285e-7■□□□□ 11.2
TSPAN4-208ENST00000409531 VAV1P15498 845 aa16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 NTSR1P30989 418 aa16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 HSPA9P38646 679 aaKnown RBP16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 CTSOP43234 321 aaPredicted RBP16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 MMP13P45452 471 aa16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 PXNP49023 591 aaPredicted RBP16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 FNDC3BQ53EP0 1204 aaKnown RBP16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 TEX44Q53QW1 395 aa16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 SDE2Q6IQ49 451 aa16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 TMEM92Q6UXU6 159 aa16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 TEX26Q8N6G2 289 aa16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 CCDC89Q8N998 374 aa16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 TSTD1Q8NFU3 115 aa16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 CYB5D2Q8WUJ1 264 aa16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 ISG20Q96AZ6 181 aaKnown RBP16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 HHIPQ96QV1 700 aa16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 IL12RB2Q99665 862 aa16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 DDX47Q9H0S4 455 aaKnown RBP16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 USP29Q9HBJ7 922 aa16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 ZDHHC4Q9NPG8 344 aa16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 THAP10Q9P2Z0 257 aaPredicted RBP16.78■□□□□ 0.28
TSPAN4-208ENST00000409531 PCYOX1Q9UHG3 505 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms