RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 HTRA2O43464 458 aaPredicted RBP24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 TADA2AO75478 443 aa24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 OCM2P0CE71 109 aa24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 OCMP0CE72 109 aaPredicted RBP24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 INSRRP14616 1297 aa24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 LMO2P25791 158 aa24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 ATICP31939 592 aa24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 RFTN1Q14699 578 aaPredicted RBP24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 DCAF6Q58WW2 860 aa24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 CERCAMQ5T4B2 595 aa24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 BORCS5Q969J3 196 aa24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 HIPK3Q9H422 1215 aa24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 PRMT7Q9NVM4 692 aaPredicted RBP24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 STAMBPO95630 424 aa24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 ZNF286BP0CG31 522 aa24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 TFEBP19484 476 aa24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 SULT1E1P49888 294 aa24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 IFRD2Q12894 506 aaPredicted RBP24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 SPIDRQ14159 915 aa24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 CELF3Q5SZQ8 465 aaKnown RBP24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 TMEM110Q86TL2 294 aa24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 ZMAT2Q96NC0 199 aaKnown RBP24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 ANKRD60Q9BZ19 345 aa24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 TUT1Q9H6E5 874 aaKnown RBP24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 NOL11Q9H8H0 719 aaKnown RBP24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 RAP2CQ9Y3L5 183 aa24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 GRID2O43424 1007 aa24.32■■□□□ 1.48
CSNK1E-203ENST00000396832 ATE1O95260 518 aa24.32■■□□□ 1.48
CSNK1E-203ENST00000396832 MCF2P10911 925 aa24.32■■□□□ 1.48
CSNK1E-203ENST00000396832 TRIM25Q14258 630 aaKnown RBP24.32■■□□□ 1.48
CSNK1E-203ENST00000396832 ZNF829Q3KNS6 432 aaPredicted RBP24.32■■□□□ 1.48
CSNK1E-203ENST00000396832 DCDC5Q6ZRR9 648 aa24.32■■□□□ 1.48
CSNK1E-203ENST00000396832 SLX1AQ9BQ83 275 aa24.32■■□□□ 1.48
CSNK1E-203ENST00000396832 TASP1Q9H6P5 420 aa24.32■■□□□ 1.48
CSNK1E-203ENST00000396832 CROCCQ5TZA2 2017 aa24.32■■□□□ 1.48
CSNK1E-203ENST00000396832 TCAF2A6NFQ2 919 aa24.32■■□□□ 1.48
CSNK1E-203ENST00000396832 C9IYK1 514 aa24.32■■□□□ 1.48
CSNK1E-203ENST00000396832 XPOTO43592 962 aaKnown RBP24.32■■□□□ 1.48
CSNK1E-203ENST00000396832 MLNP12872 115 aa24.32■■□□□ 1.48
CSNK1E-203ENST00000396832 HMGB2P26583 209 aaKnown RBP24.32■■□□□ 1.48
CSNK1E-203ENST00000396832 HALP42357 657 aa24.32■■□□□ 1.48
CSNK1E-203ENST00000396832 HERC3Q15034 1050 aa24.32■■□□□ 1.48
CSNK1E-203ENST00000396832 PKDCCQ504Y2 493 aa24.32■■□□□ 1.48
CSNK1E-203ENST00000396832 GRTP1Q5TC63 336 aa24.32■■□□□ 1.48
CSNK1E-203ENST00000396832 RWDD4Q6NW29 188 aaKnown RBP24.32■■□□□ 1.48
CSNK1E-203ENST00000396832 PCDH20Q8N6Y1 951 aaKnown RBP24.32■■□□□ 1.48
CSNK1E-203ENST00000396832 KLRG1Q96E93 195 aa24.32■■□□□ 1.48
CSNK1E-203ENST00000396832 SCYL1Q96KG9 808 aa24.32■■□□□ 1.48
CSNK1E-203ENST00000396832 A0A087WXM4 84 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 C2P06681 752 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 RAB15P59190 212 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 MAMDC4Q6UXC1 1216 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 HERC6Q8IVU3 1022 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 DEFB106AQ8N104 65 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 DDHD1Q8NEL9 900 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 PLEKHA8Q96JA3 519 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 RBBP8Q99708 897 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 CPNE1Q99829 537 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 SPATC1LQ9H0A9 340 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 NMRAL1Q9HBL8 299 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 IARS2Q9NSE4 1012 aaKnown RBP24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 PIGNO95427 931 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 C22orf31O95567 290 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 C8BP07358 591 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 TXNP10599 105 aaKnown RBP24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 ADSLP30566 484 aaPredicted RBP24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 C21orf59P57076 290 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 RHDQ02161 417 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 CTU1Q7Z7A3 348 aaKnown RBP24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 SGF29Q96ES7 293 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 CHRAC1Q9NRG0 131 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 CDYLQ9Y232 598 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 TMEM247A6NEH6 219 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 CKMT2P17540 419 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 EDNRBP24530 442 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 NR2C2P49116 596 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 NAGLUP54802 743 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 ZNF280AP59817 542 aaPredicted RBP24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 ARL13AQ5H913 290 aaPredicted RBP24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 LBX2Q6XYB7 198 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 ZBTB49Q6ZSB9 765 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 CNTD1Q8N815 330 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 SLCO4A1Q96BD0 722 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 OXSMQ9NWU1 459 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 DUS2Q9NX74 493 aaKnown RBP24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 SNTG2Q9NY99 539 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 ZDHHC2Q9UIJ5 367 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 CDH7Q9ULB5 785 aa24.31■■□□□ 1.48
CSNK1E-203ENST00000396832 ZNF701M0R085 212 aaPredicted RBP24.3■■□□□ 1.48
CSNK1E-203ENST00000396832 ZBTB11O95625 1053 aaPredicted RBP24.3■■□□□ 1.48
CSNK1E-203ENST00000396832 ZNF12P17014 697 aa24.3■■□□□ 1.48
CSNK1E-203ENST00000396832 MAGEA12P43365 314 aa24.3■■□□□ 1.48
CSNK1E-203ENST00000396832 NHSL2Q5HYW2 709 aa24.3■■□□□ 1.48
CSNK1E-203ENST00000396832 OGFOD2Q6N063 350 aa24.3■■□□□ 1.48
CSNK1E-203ENST00000396832 XKR5Q6UX68 686 aa24.3■■□□□ 1.48
CSNK1E-203ENST00000396832 ZNF786Q8N393 782 aa24.3■■□□□ 1.48
CSNK1E-203ENST00000396832 URGCPQ8TCY9 931 aa24.3■■□□□ 1.48
CSNK1E-203ENST00000396832 TRPM4Q8TD43 1214 aa24.3■■□□□ 1.48
CSNK1E-203ENST00000396832 OMDQ99983 421 aa24.3■■□□□ 1.48
CSNK1E-203ENST00000396832 ASB7Q9H672 318 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms