RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 OR1E1P30953 314 aa17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 L1CAMP32004 1257 aa17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 SCNN1AP37088 669 aa17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 IRAK1P51617 712 aa17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 CLDN2P57739 230 aa17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 BPIFB4P59827 614 aa17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 ARHGAP40Q5TG30 622 aa17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 ISM2Q6H9L7 571 aa17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 C22orf39Q6P5X5 142 aa17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 GBP6Q6ZN66 633 aa17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 FAM183BPQ6ZVS7 135 aa17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 DENND6BQ8NEG7 585 aa17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 ZNF548Q8NEK5 533 aaPredicted RBP17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 NAT6Q93015 286 aa17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 NT5C3BQ969T7 300 aa17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 ARHGEF26Q96DR7 871 aa17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 NAF1Q96HR8 494 aaKnown RBP17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 TBATAQ96M53 351 aa17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 SLC46A1Q96NT5 459 aa17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 NPY6RQ99463 290 aa17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 HEPHQ9BQS7 1158 aa17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 RETREG1Q9H6L5 497 aa17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 FZD3Q9NPG1 666 aa17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 ATMQ13315 3056 aa17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 IGLV3-10A0A075B6K4 115 aa17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 LY6G6EA0A0G2JKS1 128 aa17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 EME2A4GXA9 379 aaPredicted RBP17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 BECN2A8MW95 431 aa17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 K7ERQ8 282 aa17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 AQP9O43315 295 aa17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 SMAD6O43541 496 aaKnown RBP17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 LEFTY1O75610 366 aa17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 CNTN5O94779 1100 aa17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 PAK4O96013 591 aaPredicted RBP17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 C6P13671 934 aa17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 ADRB3P13945 408 aa17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 ETFBP38117 255 aa17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 MORC3Q14149 939 aa17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 FZD2Q14332 565 aa17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 ALFQ53S48 1182 aa17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 SEL1L3Q68CR1 1132 aa17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 RBM44Q6ZP01 1051 aaKnown RBP17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 DPY19L3Q6ZPD9 716 aa17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 ARL14Q8N4G2 192 aa17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 CHST14Q8NCH0 376 aa17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 GRIN3AQ8TCU5 1115 aa17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 ISG20Q96AZ6 181 aaKnown RBP17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 VCPIP1Q96JH7 1222 aa17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 HAPLN3Q96S86 360 aa17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 IL12RB2Q99665 862 aa17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 OSBPL2Q9H1P3 480 aa17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 ACP6Q9NPH0 428 aa17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 PIGVQ9NUD9 493 aa17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 FADS3Q9Y5Q0 445 aa17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 U3KQA8 63 aa17.86■□□□□ 0.45
EXOSC3-202ENST00000396521 A0A0D9SEW6 157 aa17.85■□□□□ 0.45
EXOSC3-202ENST00000396521 B8ZZF3 427 aa17.85■□□□□ 0.45
EXOSC3-202ENST00000396521 TOR1BO14657 336 aa17.85■□□□□ 0.45
EXOSC3-202ENST00000396521 SERPINH1P50454 418 aaKnown RBP17.85■□□□□ 0.45
EXOSC3-202ENST00000396521 GEMIN4P57678 1058 aaKnown RBP17.85■□□□□ 0.45
EXOSC3-202ENST00000396521 SKOR1P84550 965 aa17.85■□□□□ 0.45
EXOSC3-202ENST00000396521 MAPK8IP2Q13387 824 aaPredicted RBP17.85■□□□□ 0.45
EXOSC3-202ENST00000396521 PTK2BQ14289 1009 aa17.85■□□□□ 0.45
EXOSC3-202ENST00000396521 NR0B2Q15466 257 aa17.85■□□□□ 0.45
EXOSC3-202ENST00000396521 ARHGAP44Q17R89 818 aa17.85■□□□□ 0.45
EXOSC3-202ENST00000396521 EXOC3L4Q17RC7 722 aa17.85■□□□□ 0.45
EXOSC3-202ENST00000396521 SLC25A52Q3SY17 297 aa17.85■□□□□ 0.45
EXOSC3-202ENST00000396521 CARD16Q5EG05 197 aa17.85■□□□□ 0.45
EXOSC3-202ENST00000396521 XKR5Q6UX68 686 aa17.85■□□□□ 0.45
EXOSC3-202ENST00000396521 ZNF683Q8IZ20 524 aa17.85■□□□□ 0.45
EXOSC3-202ENST00000396521 MED8Q96G25 268 aa17.85■□□□□ 0.45
EXOSC3-202ENST00000396521 C1QTNF2Q9BXJ5 285 aa17.85■□□□□ 0.45
EXOSC3-202ENST00000396521 CPNE5Q9HCH3 593 aa17.85■□□□□ 0.45
EXOSC3-202ENST00000396521 SPASTQ9UBP0 616 aa17.85■□□□□ 0.45
EXOSC3-202ENST00000396521 CTNND2Q9UQB3 1225 aa17.85■□□□□ 0.45
EXOSC3-202ENST00000396521 WASF2Q9Y6W5 498 aa17.85■□□□□ 0.45
EXOSC3-202ENST00000396521 CPED1A4D0V7 1026 aa17.84■□□□□ 0.45
EXOSC3-202ENST00000396521 POM121BA6NF01 834 aa17.84■□□□□ 0.45
EXOSC3-202ENST00000396521 ADCY5O95622 1261 aa17.84■□□□□ 0.45
EXOSC3-202ENST00000396521 ERBB2P04626 1255 aa17.84■□□□□ 0.45
EXOSC3-202ENST00000396521 JUNDP17535 347 aa17.84■□□□□ 0.45
EXOSC3-202ENST00000396521 BMP6P22004 513 aa17.84■□□□□ 0.45
EXOSC3-202ENST00000396521 DEUP1Q05D60 604 aa17.84■□□□□ 0.45
EXOSC3-202ENST00000396521 TTC9Q92623 222 aa17.84■□□□□ 0.45
EXOSC3-202ENST00000396521 TNKS2Q9H2K2 1166 aa17.84■□□□□ 0.45
EXOSC3-202ENST00000396521 SATB2Q9UPW6 733 aa17.84■□□□□ 0.45
EXOSC3-202ENST00000396521 TMX2-CTNND1H3BSU7 103 aa17.83■□□□□ 0.44
EXOSC3-202ENST00000396521 K7ENP7 123 aa17.83■□□□□ 0.44
EXOSC3-202ENST00000396521 NEBLO76041 1014 aa17.83■□□□□ 0.44
EXOSC3-202ENST00000396521 TGM2P21980 687 aa17.83■□□□□ 0.44
EXOSC3-202ENST00000396521 GGCXP38435 758 aa17.83■□□□□ 0.44
EXOSC3-202ENST00000396521 SULT1E1P49888 294 aa17.83■□□□□ 0.44
EXOSC3-202ENST00000396521 PFN3P60673 137 aa17.83■□□□□ 0.44
EXOSC3-202ENST00000396521 YPEL5P62699 121 aa17.83■□□□□ 0.44
EXOSC3-202ENST00000396521 PDE1CQ14123 709 aaPredicted RBP17.83■□□□□ 0.44
EXOSC3-202ENST00000396521 CDKN3Q16667 212 aa17.83■□□□□ 0.44
EXOSC3-202ENST00000396521 ZNF542PQ5EBM4 170 aa17.83■□□□□ 0.44
EXOSC3-202ENST00000396521 INO80CQ6PI98 192 aaPredicted RBP17.83■□□□□ 0.44
EXOSC3-202ENST00000396521 LINGO4Q6UY18 593 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms