RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 SDHAF4Q5VUM1 108 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 GDF6Q6KF10 455 aaPredicted RBP9.43□□□□□ -0.9
NDE1-201ENST00000396354 TFAP2DQ7Z6R9 452 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 MYLK4Q86YV6 388 aaPredicted RBP9.43□□□□□ -0.9
NDE1-201ENST00000396354 CRYBG2Q8N1P7 616 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 DCBLD1Q8N8Z6 715 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 OR9I1Q8NGQ6 314 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 GATA6Q92908 595 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 HHIPL1Q96JK4 782 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 QKIQ96PU8 341 aaKnown RBP eCLIP9.43□□□□□ -0.9
NDE1-201ENST00000396354 ACE2Q9BYF1 805 aaPredicted RBP9.43□□□□□ -0.9
NDE1-201ENST00000396354 GDAP2Q9NXN4 497 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 MOCS1Q9NZB8 636 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 ZDHHC2Q9UIJ5 367 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 UBQLN1Q9UMX0 589 aaKnown RBP9.43□□□□□ -0.9
NDE1-201ENST00000396354 C15orf38-AP3S2A0A0A6YYH1 394 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 GRXCR2A6NFK2 248 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 MAGEC1O60732 1142 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 GCATO75600 419 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 ALDH1A3P47895 512 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 VEGFBP49765 207 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 BCAT1P54687 386 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 MSLNQ13421 630 aaPredicted RBP9.43□□□□□ -0.9
NDE1-201ENST00000396354 PPP1R3AQ16821 1122 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 SLC26A9Q7LBE3 791 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 ARPINQ7Z6K5 226 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 B3GALNT2Q8NCR0 500 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 MPP4Q96JB8 637 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 ELMO2Q96JJ3 720 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 FRMD8P1Q9BZ68 369 aaPredicted RBP9.43□□□□□ -0.9
NDE1-201ENST00000396354 TRPV6Q9H1D0 765 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 AGO3Q9H9G7 860 aaKnown RBP9.43□□□□□ -0.9
NDE1-201ENST00000396354 DCDC2Q9UHG0 476 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 KIAA1257Q9ULG3 409 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 BOLA1Q9Y3E2 137 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 SHROOM3Q8TF72 1996 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 MYBPHLA2RUH7 354 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 KCNU1A8MYU2 1149 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 MGEA5O60502 916 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 FOXD2O60548 495 aaPredicted RBP9.43□□□□□ -0.9
NDE1-201ENST00000396354 KLHL2O95198 593 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 CHRNA1P02708 482 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 CALRP27797 417 aaKnown RBP9.43□□□□□ -0.9
NDE1-201ENST00000396354 TM4SF4P48230 202 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 CDH13P55290 713 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 TLR1Q15399 786 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 DPYSL2Q16555 572 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 CWF19L1Q69YN2 538 aaKnown RBP9.43□□□□□ -0.9
NDE1-201ENST00000396354 KYAT3Q6YP21 454 aaKnown RBP9.43□□□□□ -0.9
NDE1-201ENST00000396354 CLEC20AQ6ZU45 233 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 TMC7Q7Z402 723 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 ZMIZ2Q8NF64 920 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 OR6P1Q8NGX9 317 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 GRIN3AQ8TCU5 1115 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 GPR152Q8TDT2 470 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 SNRNP27Q8WVK2 155 aaKnown RBP9.43□□□□□ -0.9
NDE1-201ENST00000396354 NXNL1Q96CM4 212 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 ZFYVE28Q9HCC9 887 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 IRAK4Q9NWZ3 460 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 MPP6Q9NZW5 540 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 GABRQQ9UN88 632 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 AURKCQ9UQB9 309 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.43□□□□□ -0.9
NDE1-201ENST00000396354 SNX13Q9Y5W8 968 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 PTGDR2Q9Y5Y4 395 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 C17orf102A2RUQ5 167 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 FAM149AA5PLN7 773 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 SCAMP3O14828 347 aaKnown RBP9.42□□□□□ -0.9
NDE1-201ENST00000396354 MDM4O15151 490 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 TRIM13O60858 407 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 PIK3R1P27986 724 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 SPRP35270 261 aaPredicted RBP9.42□□□□□ -0.9
NDE1-201ENST00000396354 CLCNKBP51801 687 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 RAP1GDS1P52306 607 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 SLC12A2P55011 1212 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 MS4A2Q01362 244 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 TUBB3Q13509 450 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 SEMA5AQ13591 1074 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 SLC12A1Q13621 1099 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 LAMB3Q13751 1172 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 PRPSAP1Q14558 356 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 LIN52Q52LA3 116 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 IER5LQ5T953 404 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 SEL1L3Q68CR1 1132 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 CLEC6AQ6EIG7 209 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 RBM44Q6ZP01 1051 aaKnown RBP9.42□□□□□ -0.9
NDE1-201ENST00000396354 UNC93AQ86WB7 457 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 DSELQ8IZU8 1212 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 EME1Q96AY2 570 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 RTP4Q96DX8 246 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 ERLEC1Q96DZ1 483 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 GAD1Q99259 594 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 CENPKQ9BS16 269 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 UBE2OQ9C0C9 1292 aaKnown RBP9.42□□□□□ -0.9
NDE1-201ENST00000396354 ILKAPQ9H0C8 392 aaPredicted RBP9.42□□□□□ -0.9
NDE1-201ENST00000396354 BRD8Q9H0E9 1235 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 TKTL2Q9H0I9 626 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 FETUBQ9UGM5 382 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 ZNF180Q9UJW8 692 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 CDY2AQ9Y6F7 541 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms