RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 CCNHP51946 323 aaPredicted RBP16.83■□□□□ 0.28
CXCL1-201ENST00000395761 GBE1Q04446 702 aa16.83■□□□□ 0.28
CXCL1-201ENST00000395761 IL10RBQ08334 325 aa16.83■□□□□ 0.28
CXCL1-201ENST00000395761 SLC10A2Q12908 348 aaPredicted RBP16.83■□□□□ 0.28
CXCL1-201ENST00000395761 LLGL1Q15334 1064 aa16.83■□□□□ 0.28
CXCL1-201ENST00000395761 ELF2Q15723 593 aa16.83■□□□□ 0.28
CXCL1-201ENST00000395761 TTC31Q49AM3 519 aaPredicted RBP16.83■□□□□ 0.28
CXCL1-201ENST00000395761 SLC36A4Q6YBV0 504 aa16.83■□□□□ 0.28
CXCL1-201ENST00000395761 USP34Q70CQ2 3546 aa16.83■□□□□ 0.28
CXCL1-201ENST00000395761 ARMCX6Q7L4S7 300 aa16.83■□□□□ 0.28
CXCL1-201ENST00000395761 LPCAT2Q7L5N7 544 aa16.83■□□□□ 0.28
CXCL1-201ENST00000395761 DSG4Q86SJ6 1040 aa16.83■□□□□ 0.28
CXCL1-201ENST00000395761 ALYREFQ86V81 257 aaKnown RBP16.83■□□□□ 0.28
CXCL1-201ENST00000395761 KATNAL2Q8IYT4 538 aa16.83■□□□□ 0.28
CXCL1-201ENST00000395761 RYBPQ8N488 228 aaPredicted RBP16.83■□□□□ 0.28
CXCL1-201ENST00000395761 HDDC3Q8N4P3 179 aa16.83■□□□□ 0.28
CXCL1-201ENST00000395761 DCLK2Q8N568 766 aa16.83■□□□□ 0.28
CXCL1-201ENST00000395761 TMIEQ8NEW7 156 aa16.83■□□□□ 0.28
CXCL1-201ENST00000395761 OR6K2Q8NGY2 324 aa16.83■□□□□ 0.28
CXCL1-201ENST00000395761 LRRN4Q8WUT4 740 aa16.83■□□□□ 0.28
CXCL1-201ENST00000395761 UBE2Q2Q8WVN8 375 aa16.83■□□□□ 0.28
CXCL1-201ENST00000395761 CASKIN2Q8WXE0 1202 aa16.83■□□□□ 0.28
CXCL1-201ENST00000395761 VOPP1Q96AW1 172 aa16.83■□□□□ 0.28
CXCL1-201ENST00000395761 CCDC114Q96M63 670 aa16.83■□□□□ 0.28
CXCL1-201ENST00000395761 HEPHQ9BQS7 1158 aa16.83■□□□□ 0.28
CXCL1-201ENST00000395761 GPR174Q9BXC1 333 aa16.83■□□□□ 0.28
CXCL1-201ENST00000395761 NEUROG2Q9H2A3 272 aa16.83■□□□□ 0.28
CXCL1-201ENST00000395761 SP110Q9HB58 689 aa16.83■□□□□ 0.28
CXCL1-201ENST00000395761 LZTFL1Q9NQ48 299 aa16.83■□□□□ 0.28
CXCL1-201ENST00000395761 NYNRINQ9P2P1 1898 aaKnown RBP16.83■□□□□ 0.28
CXCL1-201ENST00000395761 LHX3Q9UBR4 397 aa16.83■□□□□ 0.28
CXCL1-201ENST00000395761 FARP1Q9Y4F1 1045 aaPredicted RBP16.83■□□□□ 0.28
CXCL1-201ENST00000395761 WASF2Q9Y6W5 498 aa16.83■□□□□ 0.28
CXCL1-201ENST00000395761 SDK1Q7Z5N4 2213 aa16.82■□□□□ 0.28
CXCL1-201ENST00000395761 WDR87Q6ZQQ6 2873 aa16.82■□□□□ 0.28
CXCL1-201ENST00000395761 USP27XA6NNY8 438 aa16.82■□□□□ 0.28
CXCL1-201ENST00000395761 ZNF487B1APH4 448 aa16.82■□□□□ 0.28
CXCL1-201ENST00000395761 MAFKO60675 156 aa16.82■□□□□ 0.28
CXCL1-201ENST00000395761 NDUFS2O75306 463 aa16.82■□□□□ 0.28
CXCL1-201ENST00000395761 LEFTY1O75610 366 aa16.82■□□□□ 0.28
CXCL1-201ENST00000395761 PALMO75781 387 aa16.82■□□□□ 0.28
CXCL1-201ENST00000395761 RNASEH2AO75792 299 aaKnown RBP16.82■□□□□ 0.28
CXCL1-201ENST00000395761 PEX11BO96011 259 aa16.82■□□□□ 0.28
CXCL1-201ENST00000395761 DRD3P35462 400 aa16.82■□□□□ 0.28
CXCL1-201ENST00000395761 CDKN2BP42772 138 aa16.82■□□□□ 0.28
CXCL1-201ENST00000395761 RHOAP61586 193 aa16.82■□□□□ 0.28
CXCL1-201ENST00000395761 SNRPD1P62314 119 aaKnown RBP16.82■□□□□ 0.28
CXCL1-201ENST00000395761 TAZQ16635 292 aa16.82■□□□□ 0.28
CXCL1-201ENST00000395761 MYLK3Q32MK0 819 aa16.82■□□□□ 0.28
CXCL1-201ENST00000395761 USP30Q70CQ3 517 aa16.82■□□□□ 0.28
CXCL1-201ENST00000395761 ZSCAN30Q86W11 494 aa16.82■□□□□ 0.28
CXCL1-201ENST00000395761 VSIG1Q86XK7 387 aa16.82■□□□□ 0.28
CXCL1-201ENST00000395761 SLC41A1Q8IVJ1 513 aa16.82■□□□□ 0.28
CXCL1-201ENST00000395761 PLPP6Q8IY26 295 aa16.82■□□□□ 0.28
CXCL1-201ENST00000395761 PLD5Q8N7P1 536 aa16.82■□□□□ 0.28
CXCL1-201ENST00000395761 OR2AP1Q8NGE2 309 aa16.82■□□□□ 0.28
CXCL1-201ENST00000395761 ARRDC3Q96B67 414 aa16.82■□□□□ 0.28
CXCL1-201ENST00000395761 EXOC2Q96KP1 924 aa16.82■□□□□ 0.28
CXCL1-201ENST00000395761 OMDQ99983 421 aa16.82■□□□□ 0.28
CXCL1-201ENST00000395761 MAK16Q9BXY0 300 aaKnown RBP16.82■□□□□ 0.28
CXCL1-201ENST00000395761 IL36AQ9UHA7 158 aa16.82■□□□□ 0.28
CXCL1-201ENST00000395761 SCML1Q9UN30 329 aa16.82■□□□□ 0.28
CXCL1-201ENST00000395761 PLXND1Q9Y4D7 1925 aa16.81■□□□□ 0.28
CXCL1-201ENST00000395761 C1QTNF3-AMACRE9PGA6 284 aa16.81■□□□□ 0.28
CXCL1-201ENST00000395761 KPNA3O00505 521 aaPredicted RBP16.81■□□□□ 0.28
CXCL1-201ENST00000395761 INSIG1O15503 277 aa16.81■□□□□ 0.28
CXCL1-201ENST00000395761 ZRANB2O95218 330 aaKnown RBP eCLIP16.81■□□□□ 0.28
CXCL1-201ENST00000395761 RETP07949 1114 aa16.81■□□□□ 0.28
CXCL1-201ENST00000395761 KRT10P13645 584 aa16.81■□□□□ 0.28
CXCL1-201ENST00000395761 CTNNA1P35221 906 aaKnown RBP16.81■□□□□ 0.28
CXCL1-201ENST00000395761 RGRP47804 291 aa16.81■□□□□ 0.28
CXCL1-201ENST00000395761 ADCY2Q08462 1091 aa16.81■□□□□ 0.28
CXCL1-201ENST00000395761 SLC10A7Q0GE19 358 aa16.81■□□□□ 0.28
CXCL1-201ENST00000395761 GALNT2Q10471 571 aa16.81■□□□□ 0.28
CXCL1-201ENST00000395761 CNTN1Q12860 1018 aa16.81■□□□□ 0.28
CXCL1-201ENST00000395761 ODF2Q5BJF6 829 aa16.81■□□□□ 0.28
CXCL1-201ENST00000395761 FAM46CQ5VWP2 391 aa16.81■□□□□ 0.28
CXCL1-201ENST00000395761 SLC9A4Q6AI14 798 aa16.81■□□□□ 0.28
CXCL1-201ENST00000395761 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.81■□□□□ 0.28
CXCL1-201ENST00000395761 SPOCD1Q6ZMY3 1216 aa16.81■□□□□ 0.28
CXCL1-201ENST00000395761 NT5DC3Q86UY8 548 aa16.81■□□□□ 0.28
CXCL1-201ENST00000395761 RFX6Q8HWS3 928 aa16.81■□□□□ 0.28
CXCL1-201ENST00000395761 RCOR2Q8IZ40 523 aa16.81■□□□□ 0.28
CXCL1-201ENST00000395761 ATPAF2Q8N5M1 289 aa16.81■□□□□ 0.28
CXCL1-201ENST00000395761 ZNF419Q96HQ0 510 aaPredicted RBP16.81■□□□□ 0.28
CXCL1-201ENST00000395761 LOXL4Q96JB6 756 aa16.81■□□□□ 0.28
CXCL1-201ENST00000395761 BTBD1Q9H0C5 482 aa16.81■□□□□ 0.28
CXCL1-201ENST00000395761 ARRDC1-AS1Q9H2J1 176 aa16.81■□□□□ 0.28
CXCL1-201ENST00000395761 C6orf106Q9H6K1 298 aaPredicted RBP16.81■□□□□ 0.28
CXCL1-201ENST00000395761 ZDHHC6Q9H6R6 413 aa16.81■□□□□ 0.28
CXCL1-201ENST00000395761 DTLQ9NZJ0 730 aa16.81■□□□□ 0.28
CXCL1-201ENST00000395761 NCDNQ9UBB6 729 aa16.81■□□□□ 0.28
CXCL1-201ENST00000395761 EVLQ9UI08 416 aaPredicted RBP16.81■□□□□ 0.28
CXCL1-201ENST00000395761 GMEB2Q9UKD1 530 aa16.81■□□□□ 0.28
CXCL1-201ENST00000395761 NCKAP1Q9Y2A7 1128 aa16.81■□□□□ 0.28
CXCL1-201ENST00000395761 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.81■□□□□ 0.28
CXCL1-201ENST00000395761 PCDHA3Q9Y5H8 950 aa16.81■□□□□ 0.28
CXCL1-201ENST00000395761 CAPN6Q9Y6Q1 641 aa16.81■□□□□ 0.28
CXCL1-201ENST00000395761 KRIT1O00522 736 aa16.8■□□□□ 0.28
CXCL1-201ENST00000395761 MUSKO15146 869 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms