RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 CD53P19397 219 aa8.83□□□□□ -1
LIG3-202ENST00000378526 HUNKP57058 714 aa8.83□□□□□ -1
LIG3-202ENST00000378526 AIMP2Q13155 320 aaKnown RBP8.83□□□□□ -1
LIG3-202ENST00000378526 METTL25Q8N6Q8 603 aa8.83□□□□□ -1
LIG3-202ENST00000378526 SEC14L1Q92503 715 aa8.83□□□□□ -1
LIG3-202ENST00000378526 ZNF560Q96MR9 790 aa8.83□□□□□ -1
LIG3-202ENST00000378526 CELF4Q9BZC1 486 aaKnown RBP8.83□□□□□ -1
LIG3-202ENST00000378526 ARMCX1Q9P291 453 aa8.83□□□□□ -1
LIG3-202ENST00000378526 INPPL1O15357 1258 aa8.83□□□□□ -1
LIG3-202ENST00000378526 SLC16A8O95907 504 aa8.83□□□□□ -1
LIG3-202ENST00000378526 CST1P01037 141 aa8.83□□□□□ -1
LIG3-202ENST00000378526 DCDC1P59894 354 aa8.83□□□□□ -1
LIG3-202ENST00000378526 MTAPQ13126 283 aa8.83□□□□□ -1
LIG3-202ENST00000378526 RD3Q7Z3Z2 195 aa8.83□□□□□ -1
LIG3-202ENST00000378526 HS6ST3Q8IZP7 471 aa8.83□□□□□ -1
LIG3-202ENST00000378526 ZNF557Q8N988 423 aaPredicted RBP8.83□□□□□ -1
LIG3-202ENST00000378526 OR2L5Q8NG80 312 aa8.83□□□□□ -1
LIG3-202ENST00000378526 OR2L2Q8NH16 312 aa8.83□□□□□ -1
LIG3-202ENST00000378526 PGM2Q96G03 612 aa8.83□□□□□ -1
LIG3-202ENST00000378526 ZNF649Q9BS31 505 aa8.83□□□□□ -1
LIG3-202ENST00000378526 FANCFQ9NPI8 374 aa8.83□□□□□ -1
LIG3-202ENST00000378526 DISP3Q9P2K9 1392 aa8.83□□□□□ -1
LIG3-202ENST00000378526 ZW10O43264 779 aa8.83□□□□□ -1
LIG3-202ENST00000378526 AIREO43918 545 aa8.83□□□□□ -1
LIG3-202ENST00000378526 KRT33AO76009 404 aa8.83□□□□□ -1
LIG3-202ENST00000378526 SNRPB2P08579 225 aaKnown RBP8.83□□□□□ -1
LIG3-202ENST00000378526 GRIA1P42261 906 aa8.83□□□□□ -1
LIG3-202ENST00000378526 NPY2RP49146 381 aa8.83□□□□□ -1
LIG3-202ENST00000378526 NCS1P62166 190 aa8.83□□□□□ -1
LIG3-202ENST00000378526 C2orf76Q3KRA6 126 aa8.83□□□□□ -1
LIG3-202ENST00000378526 ZBTB33Q86T24 672 aa8.83□□□□□ -1
LIG3-202ENST00000378526 CPNE1Q99829 537 aa8.83□□□□□ -1
LIG3-202ENST00000378526 GPR63Q9BZJ6 419 aa8.83□□□□□ -1
LIG3-202ENST00000378526 NECTIN3Q9NQS3 549 aa8.83□□□□□ -1
LIG3-202ENST00000378526 KCNN3Q9UGI6 736 aa8.83□□□□□ -1
LIG3-202ENST00000378526 RPLP0P05388 317 aaKnown RBP8.82□□□□□ -1
LIG3-202ENST00000378526 ALAS1P13196 640 aa8.82□□□□□ -1
LIG3-202ENST00000378526 RPL22P35268 128 aaKnown RBP8.82□□□□□ -1
LIG3-202ENST00000378526 ALDH3B2P48448 385 aa8.82□□□□□ -1
LIG3-202ENST00000378526 SLC5A3P53794 718 aa8.82□□□□□ -1
LIG3-202ENST00000378526 OR2L3Q8NG85 312 aa8.82□□□□□ -1
LIG3-202ENST00000378526 CD300LFQ8TDQ1 290 aa8.82□□□□□ -1
LIG3-202ENST00000378526 USP7Q93009 1102 aa8.82□□□□□ -1
LIG3-202ENST00000378526 CLPTM1LQ96KA5 538 aa8.82□□□□□ -1
LIG3-202ENST00000378526 HOXC10Q9NYD6 342 aa8.82□□□□□ -1
LIG3-202ENST00000378526 ZNF219Q9P2Y4 722 aaPredicted RBP8.82□□□□□ -1
LIG3-202ENST00000378526 L7N2F9 121 aa8.82□□□□□ -1
LIG3-202ENST00000378526 PORP16435 677 aaPredicted RBP8.82□□□□□ -1
LIG3-202ENST00000378526 EPB42P16452 691 aa8.82□□□□□ -1
LIG3-202ENST00000378526 VAMP2P63027 116 aa8.82□□□□□ -1
LIG3-202ENST00000378526 CD83Q01151 205 aa8.82□□□□□ -1
LIG3-202ENST00000378526 FGL1Q08830 312 aa8.82□□□□□ -1
LIG3-202ENST00000378526 RPA4Q13156 261 aa8.82□□□□□ -1
LIG3-202ENST00000378526 MTF1Q14872 753 aa8.82□□□□□ -1
LIG3-202ENST00000378526 SNAPC1Q16533 368 aa8.82□□□□□ -1
LIG3-202ENST00000378526 DCAF15Q66K64 600 aa8.82□□□□□ -1
LIG3-202ENST00000378526 SKA3Q8IX90 412 aa8.82□□□□□ -1
LIG3-202ENST00000378526 UFSP2Q9NUQ7 469 aa8.82□□□□□ -1
LIG3-202ENST00000378526 DGKBQ9Y6T7 804 aa8.82□□□□□ -1
LIG3-202ENST00000378526 UGGT2Q9NYU1 1516 aa8.82□□□□□ -1
LIG3-202ENST00000378526 USP17L12C9JPN9 530 aa8.82□□□□□ -1
LIG3-202ENST00000378526 USP17L21D6R901 530 aa8.82□□□□□ -1
LIG3-202ENST00000378526 TRDMT1O14717 391 aaKnown RBP8.82□□□□□ -1
LIG3-202ENST00000378526 AP2A2O94973 939 aa8.82□□□□□ -1
LIG3-202ENST00000378526 ADAM15Q13444 863 aa8.82□□□□□ -1
LIG3-202ENST00000378526 KCTD2Q14681 263 aa8.82□□□□□ -1
LIG3-202ENST00000378526 SV2CQ496J9 727 aa8.82□□□□□ -1
LIG3-202ENST00000378526 ZNF767PQ75MW2 155 aa8.82□□□□□ -1
LIG3-202ENST00000378526 ITPKCQ96DU7 683 aa8.82□□□□□ -1
LIG3-202ENST00000378526 C1GALT1C1Q96EU7 318 aa8.82□□□□□ -1
LIG3-202ENST00000378526 CHP1Q99653 195 aa8.82□□□□□ -1
LIG3-202ENST00000378526 RUSC1Q9BVN2 902 aa8.82□□□□□ -1
LIG3-202ENST00000378526 CLPBQ9H078 707 aa8.82□□□□□ -1
LIG3-202ENST00000378526 PSMD13Q9UNM6 376 aa8.82□□□□□ -1
LIG3-202ENST00000378526 PCDHB6Q9Y5E3 794 aa8.82□□□□□ -1
LIG3-202ENST00000378526 CTTNBP2Q8WZ74 1663 aa8.82□□□□□ -1
LIG3-202ENST00000378526 A0A087X1B8 175 aa8.82□□□□□ -1
LIG3-202ENST00000378526 TADA2AO75478 443 aa8.82□□□□□ -1
LIG3-202ENST00000378526 ATE1O95260 518 aa8.82□□□□□ -1
LIG3-202ENST00000378526 PNPP00491 289 aa8.82□□□□□ -1
LIG3-202ENST00000378526 SBK2P0C263 348 aa8.82□□□□□ -1
LIG3-202ENST00000378526 GPR15P49685 360 aa8.82□□□□□ -1
LIG3-202ENST00000378526 PEX3P56589 373 aa8.82□□□□□ -1
LIG3-202ENST00000378526 MEA1Q16626 185 aa8.82□□□□□ -1
LIG3-202ENST00000378526 DPF1Q92782 380 aa8.82□□□□□ -1
LIG3-202ENST00000378526 MCEEQ96PE7 176 aa8.82□□□□□ -1
LIG3-202ENST00000378526 GAL3ST1Q99999 423 aa8.82□□□□□ -1
LIG3-202ENST00000378526 MRPL4Q9BYD3 311 aaKnown RBP8.82□□□□□ -1
LIG3-202ENST00000378526 TRAF6Q9Y4K3 522 aa8.82□□□□□ -1
LIG3-202ENST00000378526 FLT4P35916 1363 aa8.82□□□□□ -1
LIG3-202ENST00000378526 KIAA0232Q92628 1395 aa8.82□□□□□ -1
LIG3-202ENST00000378526 AFF2P51816 1311 aa8.82□□□□□ -1
LIG3-202ENST00000378526 EEF2KO00418 725 aaKnown RBP8.82□□□□□ -1
LIG3-202ENST00000378526 CHL1O00533 1208 aa8.82□□□□□ -1
LIG3-202ENST00000378526 PDCD5O14737 125 aa8.82□□□□□ -1
LIG3-202ENST00000378526 ITGA2BP08514 1039 aa8.82□□□□□ -1
LIG3-202ENST00000378526 SPOCK1Q08629 439 aa8.82□□□□□ -1
LIG3-202ENST00000378526 INSCQ1MX18 579 aa8.82□□□□□ -1
LIG3-202ENST00000378526 WSCD2Q2TBF2 565 aa8.82□□□□□ -1
LIG3-202ENST00000378526 FAM91A1Q658Y4 838 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms