RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 LMO3Q8TAP4 145 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 ABHD16BQ9H3Z7 469 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 CYLDQ9NQC7 956 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 CICQ96RK0 1608 aaPredicted RBP17.61■□□□□ 0.41
PTPRU-202ENST00000373779 UPP2O95045 317 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 ZDHHC13Q8IUH4 622 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 GLIS1Q8NBF1 620 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 UCMAQ8WVF2 138 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 DUSP16Q9BY84 665 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 EME2A4GXA9 379 aaPredicted RBP17.61■□□□□ 0.41
PTPRU-202ENST00000373779 PLSCR1O15162 318 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 CSH1P0DML2 217 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 CSH2P0DML3 217 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 FMO4P31512 558 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 IDH3AP50213 366 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 PMF1Q6P1K2 205 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 TMEM26Q6ZUK4 368 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 HOMEZQ8IX15 550 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 HS6ST3Q8IZP7 471 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 TCF12Q99081 682 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 KLHL25Q9H0H3 589 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 CATSPERZQ9NTU4 200 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.61■□□□□ 0.41
PTPRU-202ENST00000373779 CCNT2O60583 730 aaKnown RBP17.61■□□□□ 0.41
PTPRU-202ENST00000373779 MYCP01106 439 aaPredicted RBP17.61■□□□□ 0.41
PTPRU-202ENST00000373779 PEX2P28328 305 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 GPX6P59796 221 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 RALGPS1Q5JS13 557 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 TXNRD3NBQ6F5E7 133 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 CCDC103Q8IW40 242 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 CASP10Q92851 521 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 FBXO5Q9UKT4 447 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 RAB26Q9ULW5 256 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 DERAQ9Y315 318 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 PSMB9P28065 219 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 ATP6V1E1P36543 226 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 AIF1P55008 147 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 DPYSQ14117 519 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 HSDL1Q3SXM5 330 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 PKN3Q6P5Z2 889 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 C7orf43Q8WVR3 580 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 NMRK2Q9NPI5 230 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 ATRNL1Q5VV63 1379 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 CBX4O00257 560 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 CLDN5O00501 218 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 KPNA4O00629 521 aaPredicted RBP17.6■□□□□ 0.41
PTPRU-202ENST00000373779 HS6ST1O60243 411 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 CD86P42081 329 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 POU5F1Q01860 360 aaKnown RBP17.6■□□□□ 0.41
PTPRU-202ENST00000373779 BNIP2Q12982 314 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 ZNF276Q8N554 614 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 FAM81AQ8TBF8 368 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 TRPC4APQ8TEL6 797 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 ATXN10Q9UBB4 475 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 C4AP0C0L4 1744 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 C4BP0C0L5 1744 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 ICAM3P32942 547 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 DDX39BQ13838 428 aaKnown RBP17.6■□□□□ 0.41
PTPRU-202ENST00000373779 ABRAXAS1Q6UWZ7 409 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 GLT6D1Q7Z4J2 308 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 TRIM69Q86WT6 500 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 ATG16L2Q8NAA4 619 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 TLR8Q9NR97 1041 aaKnown RBP17.6■□□□□ 0.41
PTPRU-202ENST00000373779 TSPAN8P19075 237 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 IL1R2P27930 398 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 SOAT1P35610 550 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 LIMK2P53671 638 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 TRMT10BQ6PF06 316 aaKnown RBP17.6■□□□□ 0.41
PTPRU-202ENST00000373779 GK5Q6ZS86 529 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 STAG3L4Q8TBR4 150 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 WDR60Q8WVS4 1066 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 DDX1Q92499 740 aaKnown RBP17.6■□□□□ 0.41
PTPRU-202ENST00000373779 CLK4Q9HAZ1 481 aaKnown RBP17.6■□□□□ 0.41
PTPRU-202ENST00000373779 PARVBQ9HBI1 364 aa17.6■□□□□ 0.41
PTPRU-202ENST00000373779 TBX10O75333 385 aa17.59■□□□□ 0.41
PTPRU-202ENST00000373779 GUCA1CO95843 209 aa17.59■□□□□ 0.41
PTPRU-202ENST00000373779 KPNA1P52294 538 aaPredicted RBP17.59■□□□□ 0.41
PTPRU-202ENST00000373779 PRRG1O14668 218 aa17.59■□□□□ 0.41
PTPRU-202ENST00000373779 RAD51BO15315 384 aa17.59■□□□□ 0.41
PTPRU-202ENST00000373779 ZBTB24O43167 697 aaPredicted RBP17.59■□□□□ 0.41
PTPRU-202ENST00000373779 MAP3K13O43283 966 aa17.59■□□□□ 0.41
PTPRU-202ENST00000373779 PTPN9P43378 593 aa17.59■□□□□ 0.41
PTPRU-202ENST00000373779 PEX6Q13608 980 aa17.59■□□□□ 0.41
PTPRU-202ENST00000373779 C9orf57Q5W0N0 161 aa17.59■□□□□ 0.41
PTPRU-202ENST00000373779 RELL1Q8IUW5 271 aa17.59■□□□□ 0.41
PTPRU-202ENST00000373779 PCDH19Q8TAB3 1148 aa17.59■□□□□ 0.41
PTPRU-202ENST00000373779 NAT14Q8WUY8 206 aa17.59■□□□□ 0.41
PTPRU-202ENST00000373779 POLR1EQ9GZS1 481 aaKnown RBP17.59■□□□□ 0.41
PTPRU-202ENST00000373779 ACTR8Q9H981 624 aa17.59■□□□□ 0.41
PTPRU-202ENST00000373779 NUDT5Q9UKK9 219 aa17.59■□□□□ 0.41
PTPRU-202ENST00000373779 MYH10P35580 1976 aa17.59■□□□□ 0.41
PTPRU-202ENST00000373779 HLA-DPA1P20036 260 aa17.59■□□□□ 0.41
PTPRU-202ENST00000373779 SLC39A4Q6P5W5 647 aa17.59■□□□□ 0.41
PTPRU-202ENST00000373779 PGAM4Q8N0Y7 254 aa17.59■□□□□ 0.41
PTPRU-202ENST00000373779 COLEC11Q9BWP8 271 aa17.59■□□□□ 0.41
PTPRU-202ENST00000373779 EBF3Q9H4W6 596 aa17.59■□□□□ 0.41
PTPRU-202ENST00000373779 ELOVL6Q9H5J4 265 aa17.59■□□□□ 0.41
PTPRU-202ENST00000373779 ZNF112Q9UJU3 913 aa17.59■□□□□ 0.41
PTPRU-202ENST00000373779 MSH3P20585 1137 aa17.59■□□□□ 0.41
PTPRU-202ENST00000373779 ACTR3P61158 418 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms