RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 KIAA0556O60303 1618 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 CCDC189A1A4V9 331 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 CASKO14936 926 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 HMGCRP04035 888 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 PRLRP16471 622 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 SUZ12Q15022 739 aaKnown RBP11.22□□□□□ -0.61
COL11A1-203ENST00000370096 TSGA10IPQ3SY00 556 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 SETMARQ53H47 684 aaPredicted RBP11.22□□□□□ -0.61
COL11A1-203ENST00000370096 TTMPQ5BVD1 217 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 TBC1D16Q8TBP0 767 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 RIT2Q99578 217 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 ATP13A1Q9HD20 1204 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 SAR1AQ9NR31 198 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 RNF19AQ9NV58 838 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 MORF4L1Q9UBU8 362 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 TSPAN16Q9UKR8 245 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 U3KQV3 271 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 ACADLP28330 430 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 ZNF549Q6P9A3 640 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 BHLHB9Q6PI77 547 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 LGI2Q8N0V4 545 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 ING5Q8WYH8 240 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 RNPEPL1Q9HAU8 725 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 AAASQ9NRG9 546 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 UNC13AQ9UPW8 1703 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 SNRPB2P08579 225 aaKnown RBP11.22□□□□□ -0.61
COL11A1-203ENST00000370096 CCNYL3P0C7X3 344 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 BUD31P41223 144 aaPredicted RBP11.22□□□□□ -0.61
COL11A1-203ENST00000370096 NDST1P52848 882 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 SLC5A9Q2M3M2 681 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 ZFP69Q49AA0 526 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 DEFB128Q7Z7B8 93 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 FBXO16Q8IX29 292 aaPredicted RBP11.22□□□□□ -0.61
COL11A1-203ENST00000370096 C12orf56Q8IXR9 622 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 GPRC5AQ8NFJ5 357 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 EMID1Q96A84 441 aaPredicted RBP11.22□□□□□ -0.61
COL11A1-203ENST00000370096 Q96MT0 163 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 PARK7Q99497 189 aaKnown RBP11.22□□□□□ -0.61
COL11A1-203ENST00000370096 TPK1Q9H3S4 243 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 L2HGDHQ9H9P8 463 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 KLF15Q9UIH9 416 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 A0A075B6Q4 140 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 G3V2T6 193 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 SASH3O75995 380 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 UGT2B15P54855 530 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 SLC4A9Q96Q91 983 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 NEUROD4Q9HD90 331 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 SOHLH2Q9NX45 425 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 SLC12A4Q9UP95 1085 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 TMEM94Q12767 1356 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 NR2F1P10589 423 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 MCOLN2Q8IZK6 566 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 KBTBD8Q8NFY9 601 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 GIT1Q9Y2X7 761 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 HBS1LQ9Y450 684 aaKnown RBP11.22□□□□□ -0.61
COL11A1-203ENST00000370096 ARHGEF40Q8TER5 1519 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 ERVK-7P63135 1459 aa11.22□□□□□ -0.61
COL11A1-203ENST00000370096 ARHGEF33A8MVX0 844 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 C19orf81C9J6K1 198 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 ACSM2AQ08AH3 577 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 ACSM2BQ68CK6 577 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 PIH1D2Q8WWB5 315 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 FCRL4Q96PJ5 515 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 GFM1Q96RP9 751 aaKnown RBP11.21□□□□□ -0.61
COL11A1-203ENST00000370096 MTF2Q9Y483 593 aaPredicted RBP11.21□□□□□ -0.61
COL11A1-203ENST00000370096 BIVM-ERCC5R4GMW8 1640 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 RBAK-RBAKDNI3L0D1 243 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 PSMD9O00233 223 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 CCNKO75909 580 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 OR7A10O76100 309 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 RECQL5O94762 991 aaPredicted RBP11.21□□□□□ -0.61
COL11A1-203ENST00000370096 MTA2O94776 668 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 DBIP07108 87 aaKnown RBP11.21□□□□□ -0.61
COL11A1-203ENST00000370096 YBX3P16989 372 aaKnown RBP eCLIP11.21□□□□□ -0.61
COL11A1-203ENST00000370096 NAMPTP43490 491 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 PTPN11Q06124 597 aaPredicted RBP11.21□□□□□ -0.61
COL11A1-203ENST00000370096 FSTL1Q12841 308 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.21□□□□□ -0.61
COL11A1-203ENST00000370096 OR8H1Q8NGG4 311 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 MTMR8Q96EF0 704 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 CLCC1Q96S66 551 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 FAM126AQ9BYI3 521 aaPredicted RBP11.21□□□□□ -0.61
COL11A1-203ENST00000370096 PCDHA11Q9Y5I1 949 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 USP17L7P0C7H9 530 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 CCDC166P0CW27 439 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 CDH8P55286 799 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 GMFBP60983 142 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 POMZP3Q6PJE2 187 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 TPGS1Q6ZTW0 290 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 APTXQ7Z2E3 356 aaKnown RBP11.21□□□□□ -0.61
COL11A1-203ENST00000370096 TEX47Q8TBZ9 253 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 B3GALT6Q96L58 329 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 RASSF1Q9NS23 344 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 FKBP14Q9NWM8 211 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 SPG21Q9NZD8 308 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 TMEM216Q9P0N5 145 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 SNX6Q9UNH7 406 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 CCL15-CCL14A0A0B4J2E2 113 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 OR10H2O60403 315 aa11.21□□□□□ -0.61
COL11A1-203ENST00000370096 ERN1O75460 977 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms