RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 BCAP31P51572 246 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 BST2Q10589 180 aaKnown RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 CAMK1Q14012 370 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 TMEM132DQ14C87 1099 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 USP41Q3LFD5 358 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 DCDC5Q6ZRR9 648 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 LDHDQ86WU2 507 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 ZHX1-C8orf76Q96EF9 292 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 TEX13BQ9BXU2 312 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 PDZD7Q9H5P4 517 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 COG4Q9H9E3 785 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 AGO4Q9HCK5 861 aaKnown RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 DDX28Q9NUL7 540 aaKnown RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 SLC13A4Q9UKG4 626 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 AFG3L2Q9Y4W6 797 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 HTR3EA5X5Y0 456 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 SLC16A2P36021 539 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 GMPRP36959 345 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 TALDO1P37837 337 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 IREB2P48200 963 aaKnown RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 DYNLT1P63172 113 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 PCID2Q5JVF3 399 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 MAEAQ7L5Y9 396 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 C10orf107Q8IVU9 208 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 THEM5Q8N1Q8 247 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 RNF139Q8WU17 664 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 TINF2Q9BSI4 451 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 RUBCNLQ9H714 662 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 PREX1Q8TCU6 1659 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 RASAL1O95294 804 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 PAPSS2O95340 614 aaPredicted RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 CD58P19256 250 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 NR4A1P22736 598 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 RPS12P25398 132 aaKnown RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 EIF2DP41214 584 aaKnown RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 SUN5Q8TC36 379 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 HGH1Q9BTY7 390 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 ATPIF1Q9UII2 106 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 PRAMEF22A3QJZ6 481 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 SKAP2O75563 359 aaPredicted RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 MFN2O95140 757 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 ASS1P00966 412 aaKnown RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 HTR3CQ8WXA8 447 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 BSNDQ8WZ55 320 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 NUSAP1Q9BXS6 441 aaKnown RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 TJP2Q9UDY2 1190 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 PI4K2BG5E9Z4 385 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 MRASO14807 208 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 SEC24AO95486 1093 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 BMP1P13497 986 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 RAB10P61026 200 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 CYP51A1Q16850 503 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 CDKL4Q5MAI5 379 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 BSPRYQ5W0U4 402 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 TAS1R2Q8TE23 839 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 TMEM176AQ96HP8 235 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 CGRRF1Q99675 332 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 RAVER2Q9HCJ3 691 aaKnown RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 TFR2Q9UP52 801 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 INO80B-WBP1J3KQ70 363 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 LTA4HP09960 611 aaKnown RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 TRAPPC2P0DI81 140 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 TRAPPC2BP0DI82 140 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 ABL2P42684 1182 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 PRKCQQ04759 706 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 DMPKQ09013 629 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 MAPK11Q15759 364 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 RFTN2Q52LD8 501 aaPredicted RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 EMILIN2Q9BXX0 1053 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 LEF1Q9UJU2 399 aaPredicted RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 HAT1O14929 419 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 REM1O75628 298 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 CASP4P49662 377 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 GALK1P51570 392 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 CDH17Q12864 832 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 CCDC60Q8IWA6 550 aaPredicted RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 MCEEQ96PE7 176 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 APOL6Q9BWW8 343 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 RANBP3Q9H6Z4 567 aaPredicted RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 VTA1Q9NP79 307 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 CHD4Q14839 1912 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 NFIBO00712 420 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 MEIS2O14770 477 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 HSD17B1P14061 328 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 ACLYP53396 1101 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 TLR1Q15399 786 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 ATP6AP1Q15904 470 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 TMEM26Q6ZUK4 368 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 PHC3Q8NDX5 983 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 HDAC2Q92769 488 aaKnown RBP4.15□□□□□ -1.74
SYNE2-204ENST00000358025 SPEF1Q9Y4P9 236 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 FGF10O15520 208 aaPredicted RBP4.15□□□□□ -1.74
SYNE2-204ENST00000358025 IPO13O94829 963 aaKnown RBP4.15□□□□□ -1.74
SYNE2-204ENST00000358025 WDPCPO95876 746 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 NUDT1P36639 197 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 HSD17B12Q53GQ0 312 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 CCNJQ5T5M9 372 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 NSMCE3Q96MG7 304 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms