RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 HADHAP40939 763 aa17.47■□□□□ 0.39
VPS13B-201ENST00000355155 WNT3AP56704 352 aa17.47■□□□□ 0.39
VPS13B-201ENST00000355155 OLIG2Q13516 323 aa17.47■□□□□ 0.39
VPS13B-201ENST00000355155 SLC1A5Q15758 541 aa17.47■□□□□ 0.39
VPS13B-201ENST00000355155 RALGPS1Q5JS13 557 aa17.47■□□□□ 0.39
VPS13B-201ENST00000355155 PDPK2PQ6A1A2 396 aa17.47■□□□□ 0.39
VPS13B-201ENST00000355155 YTHDF3Q7Z739 585 aaKnown RBP17.47■□□□□ 0.39
VPS13B-201ENST00000355155 DNAAF3Q8N9W5 541 aa17.47■□□□□ 0.39
VPS13B-201ENST00000355155 LEMD2Q8NC56 503 aa17.47■□□□□ 0.39
VPS13B-201ENST00000355155 GRAMD1AQ96CP6 724 aa17.47■□□□□ 0.39
VPS13B-201ENST00000355155 MT-CYBP00156 380 aaPredicted RBP17.46■□□□□ 0.39
VPS13B-201ENST00000355155 CRHR1P34998 444 aa17.46■□□□□ 0.39
VPS13B-201ENST00000355155 CRADDP78560 199 aa17.46■□□□□ 0.39
VPS13B-201ENST00000355155 ACVR1Q04771 509 aa17.46■□□□□ 0.39
VPS13B-201ENST00000355155 IHHQ14623 411 aa17.46■□□□□ 0.39
VPS13B-201ENST00000355155 ITIH4Q14624 930 aa17.46■□□□□ 0.39
VPS13B-201ENST00000355155 INSCQ1MX18 579 aa17.46■□□□□ 0.39
VPS13B-201ENST00000355155 KIAA0930Q6ICG6 404 aaPredicted RBP17.46■□□□□ 0.39
VPS13B-201ENST00000355155 HJURPQ8NCD3 748 aaPredicted RBP17.46■□□□□ 0.39
VPS13B-201ENST00000355155 FICDQ9BVA6 458 aa17.46■□□□□ 0.39
VPS13B-201ENST00000355155 POLR1EQ9GZS1 481 aaKnown RBP17.46■□□□□ 0.39
VPS13B-201ENST00000355155 NSRP1Q9H0G5 558 aaKnown RBP17.46■□□□□ 0.39
VPS13B-201ENST00000355155 GKN1Q9NS71 199 aa17.46■□□□□ 0.39
VPS13B-201ENST00000355155 ZMYM5Q9UJ78 669 aa17.46■□□□□ 0.39
VPS13B-201ENST00000355155 UGT1A9O60656 530 aa17.46■□□□□ 0.39
VPS13B-201ENST00000355155 LRG1P02750 347 aa17.46■□□□□ 0.39
VPS13B-201ENST00000355155 MBL2P11226 248 aaPredicted RBP17.46■□□□□ 0.39
VPS13B-201ENST00000355155 ARCN1P48444 511 aaKnown RBP17.46■□□□□ 0.39
VPS13B-201ENST00000355155 ERVFC1P60507 584 aa17.46■□□□□ 0.39
VPS13B-201ENST00000355155 CIR1Q86X95 450 aaPredicted RBP17.46■□□□□ 0.39
VPS13B-201ENST00000355155 LRRC34Q8IZ02 419 aa17.46■□□□□ 0.39
VPS13B-201ENST00000355155 C4orf33Q8N1A6 199 aa17.46■□□□□ 0.39
VPS13B-201ENST00000355155 RBBP8Q99708 897 aa17.46■□□□□ 0.39
VPS13B-201ENST00000355155 MTIF3Q9H2K0 278 aaKnown RBP17.46■□□□□ 0.39
VPS13B-201ENST00000355155 UGT1A7Q9HAW7 530 aa17.46■□□□□ 0.39
VPS13B-201ENST00000355155 UGT1A10Q9HAW8 530 aa17.46■□□□□ 0.39
VPS13B-201ENST00000355155 UGT1A8Q9HAW9 530 aa17.46■□□□□ 0.39
VPS13B-201ENST00000355155 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.45■□□□□ 0.38
VPS13B-201ENST00000355155 LINC01553A4QN01 128 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 F5H423 210 aaPredicted RBP17.45■□□□□ 0.38
VPS13B-201ENST00000355155 KLF11O14901 512 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 ZMPSTE24O75844 475 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 C8AP07357 584 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 ATXN1LP0C7T5 689 aaKnown RBP17.45■□□□□ 0.38
VPS13B-201ENST00000355155 SGSHP51688 502 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 LAMB3Q13751 1172 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 QPCTQ16769 361 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 RFWD3Q6PCD5 774 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 NLRP9Q7RTR0 991 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 CTAGE3PQ8IX95 158 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 OR52K2Q8NGK3 314 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 RAB3IL1Q8TBN0 382 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 SLC22A17Q8WUG5 538 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 MRPS31Q92665 395 aaKnown RBP17.45■□□□□ 0.38
VPS13B-201ENST00000355155 ZNF669Q96BR6 464 aaPredicted RBP17.45■□□□□ 0.38
VPS13B-201ENST00000355155 ALG14Q96F25 216 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 TRIB3Q96RU7 358 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 NT5MQ9NPB1 228 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 SEPT3Q9UH03 358 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 GRID1Q9ULK0 1009 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 ARHGAP26Q9UNA1 814 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 ATG2AQ2TAZ0 1938 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.45■□□□□ 0.38
VPS13B-201ENST00000355155 MROH6A6NGR9 719 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 USP12O75317 370 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 GLUD1P00367 558 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 CA4P22748 312 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 FOXN2P32314 431 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 LIMK2P53671 638 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 ZXDBP98169 803 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 NSUN2Q08J23 767 aaKnown RBP eCLIP17.45■□□□□ 0.38
VPS13B-201ENST00000355155 ZNF177Q13360 481 aaPredicted RBP17.45■□□□□ 0.38
VPS13B-201ENST00000355155 CASC4Q6P4E1 433 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 PPHLN1Q8NEY8 458 aaKnown RBP17.45■□□□□ 0.38
VPS13B-201ENST00000355155 TCF25Q9BQ70 676 aa17.45■□□□□ 0.38
VPS13B-201ENST00000355155 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.45■□□□□ 0.38
VPS13B-201ENST00000355155 SPAG7O75391 227 aa17.44■□□□□ 0.38
VPS13B-201ENST00000355155 HNRNPA1P09651 372 aaKnown RBP eCLIP17.44■□□□□ 0.38
VPS13B-201ENST00000355155 HLA-DPA1P20036 260 aa17.44■□□□□ 0.38
VPS13B-201ENST00000355155 WEE1P30291 646 aa17.44■□□□□ 0.38
VPS13B-201ENST00000355155 INO80DQ53TQ3 878 aaPredicted RBP17.44■□□□□ 0.38
VPS13B-201ENST00000355155 LCA5Q86VQ0 697 aa17.44■□□□□ 0.38
VPS13B-201ENST00000355155 RASSF3Q86WH2 238 aa17.44■□□□□ 0.38
VPS13B-201ENST00000355155 ELMOD1Q8N336 334 aa17.44■□□□□ 0.38
VPS13B-201ENST00000355155 BBS5Q8N3I7 341 aa17.44■□□□□ 0.38
VPS13B-201ENST00000355155 TCP10LQ8TDR4 215 aa17.44■□□□□ 0.38
VPS13B-201ENST00000355155 SLC22A12Q96S37 553 aa17.44■□□□□ 0.38
VPS13B-201ENST00000355155 ZBED2Q9BTP6 218 aa17.44■□□□□ 0.38
VPS13B-201ENST00000355155 TLR9Q9NR96 1032 aa17.44■□□□□ 0.38
VPS13B-201ENST00000355155 PLLPQ9Y342 182 aa17.44■□□□□ 0.38
VPS13B-201ENST00000355155 HNRNPH2P55795 449 aaKnown RBP17.44■□□□□ 0.38
VPS13B-201ENST00000355155 RPS24P62847 133 aaKnown RBP17.44■□□□□ 0.38
VPS13B-201ENST00000355155 SMAD3P84022 425 aaKnown RBP17.44■□□□□ 0.38
VPS13B-201ENST00000355155 FOXR1Q6PIV2 292 aa17.44■□□□□ 0.38
VPS13B-201ENST00000355155 ANKRD42Q8N9B4 389 aa17.44■□□□□ 0.38
VPS13B-201ENST00000355155 SCG3Q8WXD2 468 aaKnown RBP17.44■□□□□ 0.38
VPS13B-201ENST00000355155 CABS1Q96KC9 395 aa17.44■□□□□ 0.38
VPS13B-201ENST00000355155 ARIH1Q9Y4X5 557 aaPredicted RBP17.44■□□□□ 0.38
VPS13B-201ENST00000355155 NUP210Q8TEM1 1887 aaPredicted RBP17.44■□□□□ 0.38
VPS13B-201ENST00000355155 GBF1Q92538 1859 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms