RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 BCAS2O75934 225 aaPredicted RBP24.88■■□□□ 1.57
CPNE1-202ENST00000352393 PGM3O95394 542 aa24.88■■□□□ 1.57
CPNE1-202ENST00000352393 ENO3P13929 434 aaPredicted RBP24.88■■□□□ 1.57
CPNE1-202ENST00000352393 SAT1P21673 171 aa24.88■■□□□ 1.57
CPNE1-202ENST00000352393 DNAJB2P25686 324 aa24.88■■□□□ 1.57
CPNE1-202ENST00000352393 AVPR1AP37288 418 aa24.88■■□□□ 1.57
CPNE1-202ENST00000352393 SLC41A1Q8IVJ1 513 aa24.88■■□□□ 1.57
CPNE1-202ENST00000352393 CNTN4Q8IWV2 1026 aa24.88■■□□□ 1.57
CPNE1-202ENST00000352393 CNTD1Q8N815 330 aa24.88■■□□□ 1.57
CPNE1-202ENST00000352393 NDNQ99608 321 aa24.88■■□□□ 1.57
CPNE1-202ENST00000352393 XPR1Q9UBH6 696 aa24.88■■□□□ 1.57
CPNE1-202ENST00000352393 COPG1Q9Y678 874 aaKnown RBP24.88■■□□□ 1.57
CPNE1-202ENST00000352393 AP4B1Q9Y6B7 739 aa24.88■■□□□ 1.57
CPNE1-202ENST00000352393 ME2P23368 584 aa24.88■■□□□ 1.57
CPNE1-202ENST00000352393 RABGGTBP53611 331 aa24.88■■□□□ 1.57
CPNE1-202ENST00000352393 DGKDQ16760 1214 aa24.88■■□□□ 1.57
CPNE1-202ENST00000352393 DUSP28Q4G0W2 176 aa24.88■■□□□ 1.57
CPNE1-202ENST00000352393 USP13Q92995 863 aaPredicted RBP24.88■■□□□ 1.57
CPNE1-202ENST00000352393 GPR78Q96P69 363 aa24.88■■□□□ 1.57
CPNE1-202ENST00000352393 GABRDO14764 452 aa24.87■■□□□ 1.57
CPNE1-202ENST00000352393 PGK1P00558 417 aa24.87■■□□□ 1.57
CPNE1-202ENST00000352393 MSX2P35548 267 aaPredicted RBP24.87■■□□□ 1.57
CPNE1-202ENST00000352393 TSTD2Q5T7W7 516 aa24.87■■□□□ 1.57
CPNE1-202ENST00000352393 WSCD1Q658N2 575 aa24.87■■□□□ 1.57
CPNE1-202ENST00000352393 GPRIN1Q7Z2K8 1008 aa24.87■■□□□ 1.57
CPNE1-202ENST00000352393 LINC00523Q86TU6 105 aa24.87■■□□□ 1.57
CPNE1-202ENST00000352393 KDM1BQ8NB78 822 aa24.87■■□□□ 1.57
CPNE1-202ENST00000352393 OR6J1Q8NGC5 347 aa24.87■■□□□ 1.57
CPNE1-202ENST00000352393 PDCD6IPQ8WUM4 868 aaKnown RBP24.87■■□□□ 1.57
CPNE1-202ENST00000352393 TMEM40Q8WWA1 233 aa24.87■■□□□ 1.57
CPNE1-202ENST00000352393 MAELQ96JY0 434 aaKnown RBP24.87■■□□□ 1.57
CPNE1-202ENST00000352393 MARK4Q96L34 752 aa24.87■■□□□ 1.57
CPNE1-202ENST00000352393 COPS7BQ9H9Q2 264 aaPredicted RBP24.87■■□□□ 1.57
CPNE1-202ENST00000352393 EFCAB1Q9HAE3 211 aa24.87■■□□□ 1.57
CPNE1-202ENST00000352393 ADARB2Q9NS39 739 aaKnown RBP24.87■■□□□ 1.57
CPNE1-202ENST00000352393 DDIT4Q9NX09 232 aa24.87■■□□□ 1.57
CPNE1-202ENST00000352393 PLK2Q9NYY3 685 aa24.87■■□□□ 1.57
CPNE1-202ENST00000352393 SNX10Q9Y5X0 201 aa24.87■■□□□ 1.57
CPNE1-202ENST00000352393 COL4A4P53420 1690 aaPredicted RBP24.87■■□□□ 1.57
CPNE1-202ENST00000352393 CCDC78A2IDD5 438 aa24.86■■□□□ 1.57
CPNE1-202ENST00000352393 TCAF2A6NFQ2 919 aa24.86■■□□□ 1.57
CPNE1-202ENST00000352393 ACOT8O14734 319 aa24.86■■□□□ 1.57
CPNE1-202ENST00000352393 CFLARO15519 480 aa24.86■■□□□ 1.57
CPNE1-202ENST00000352393 CACNG3O60359 315 aa24.86■■□□□ 1.57
CPNE1-202ENST00000352393 JCHAINP01591 159 aa24.86■■□□□ 1.57
CPNE1-202ENST00000352393 AHSGP02765 367 aa24.86■■□□□ 1.57
CPNE1-202ENST00000352393 TFAP2AP05549 437 aa24.86■■□□□ 1.57
CPNE1-202ENST00000352393 RPL5P46777 297 aaKnown RBP24.86■■□□□ 1.57
CPNE1-202ENST00000352393 PRPSAP1Q14558 356 aa24.86■■□□□ 1.57
CPNE1-202ENST00000352393 PDCD2Q16342 344 aaPredicted RBP24.86■■□□□ 1.57
CPNE1-202ENST00000352393 ARL13BQ3SXY8 428 aa24.86■■□□□ 1.57
CPNE1-202ENST00000352393 NXNQ6DKJ4 435 aa24.86■■□□□ 1.57
CPNE1-202ENST00000352393 ZNF467Q7Z7K2 595 aaPredicted RBP24.86■■□□□ 1.57
CPNE1-202ENST00000352393 AHI1Q8N157 1196 aa24.86■■□□□ 1.57
CPNE1-202ENST00000352393 DTNBP1Q96EV8 351 aa24.86■■□□□ 1.57
CPNE1-202ENST00000352393 EPAS1Q99814 870 aa24.86■■□□□ 1.57
CPNE1-202ENST00000352393 CRTAC1Q9NQ79 661 aa24.86■■□□□ 1.57
CPNE1-202ENST00000352393 PCDHGB4Q9UN71 923 aa24.86■■□□□ 1.57
CPNE1-202ENST00000352393 PCDHGB5Q9Y5G0 923 aa24.86■■□□□ 1.57
CPNE1-202ENST00000352393 SMIM35A0A1B0GVV1 85 aa24.86■■□□□ 1.57
CPNE1-202ENST00000352393 STX16-NPEPL1H3BU86 382 aa24.86■■□□□ 1.57
CPNE1-202ENST00000352393 ZNF135P52742 658 aaPredicted RBP24.86■■□□□ 1.57
CPNE1-202ENST00000352393 UGP2Q16851 508 aa24.86■■□□□ 1.57
CPNE1-202ENST00000352393 MFSD6LQ8IWD5 586 aa24.86■■□□□ 1.57
CPNE1-202ENST00000352393 ARRDC4Q8NCT1 418 aa24.86■■□□□ 1.57
CPNE1-202ENST00000352393 KLHL32Q96NJ5 620 aa24.86■■□□□ 1.57
CPNE1-202ENST00000352393 PKP2Q99959 881 aa24.86■■□□□ 1.57
CPNE1-202ENST00000352393 COLEC11Q9BWP8 271 aa24.86■■□□□ 1.57
CPNE1-202ENST00000352393 ZNF696Q9H7X3 374 aa24.86■■□□□ 1.57
CPNE1-202ENST00000352393 CNGB3Q9NQW8 809 aa24.86■■□□□ 1.57
CPNE1-202ENST00000352393 ACOT9Q9Y305 439 aa24.86■■□□□ 1.57
CPNE1-202ENST00000352393 PSMD3O43242 534 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 NCAM1P13591 858 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 YBX3P16989 372 aaKnown RBP eCLIP24.85■■□□□ 1.572e-6■■■■□ 21.8
CPNE1-202ENST00000352393 LRPAP1P30533 357 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 RAB10P61026 200 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 ART3Q13508 389 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 R3HDM1Q15032 1099 aaKnown RBP24.85■■□□□ 1.57
CPNE1-202ENST00000352393 RNF148Q8N7C7 305 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 GPRC5AQ8NFJ5 357 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 SMOQ99835 787 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 ZCWPW1Q9H0M4 648 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 MBLAC1A4D2B0 266 aaPredicted RBP24.85■■□□□ 1.57
CPNE1-202ENST00000352393 NPHS1O60500 1241 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 VAPBO95292 243 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 SPATA31D3P0C874 917 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 HSPA1AP0DMV8 641 aaKnown RBP24.85■■□□□ 1.57
CPNE1-202ENST00000352393 HSPA1BP0DMV9 641 aaKnown RBP24.85■■□□□ 1.57
CPNE1-202ENST00000352393 SMIM10L2AP0DMW4 78 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 SMIM10L2BP0DMW5 78 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 RGS2P41220 211 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 POLD2P49005 469 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 MPP1Q00013 466 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 MYBPC1Q00872 1141 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 ZNF460Q14592 562 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 PPP2R5DQ14738 602 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 RAB41Q5JT25 222 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 PKN3Q6P5Z2 889 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 SPATA31D4Q6ZUB0 917 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 OTOP3Q7RTS5 596 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms