RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 GREM1O60565 184 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 KIAA0754O94854 1291 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 PAPSS2O95340 614 aaPredicted RBP7.02□□□□□ -1.29
TRIM55-203ENST00000350034 TGDSO95455 350 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 LATS1O95835 1130 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 EPOP01588 193 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 PRKCGP05129 697 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 URODP06132 367 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 GSTA1P08263 222 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 PPM1AP35813 382 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 ACVRL1P37023 503 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 ALDH1A3P47895 512 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 ARCN1P48444 511 aaKnown RBP7.02□□□□□ -1.29
TRIM55-203ENST00000350034 SLC11A2P49281 568 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 CDH4P55283 916 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 HTRA4P83105 476 aaPredicted RBP7.02□□□□□ -1.29
TRIM55-203ENST00000350034 GNA12Q03113 381 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 ACTN3Q08043 901 aaPredicted RBP7.02□□□□□ -1.29
TRIM55-203ENST00000350034 PDE1CQ14123 709 aaPredicted RBP7.02□□□□□ -1.29
TRIM55-203ENST00000350034 POLD3Q15054 466 aaPredicted RBP7.02□□□□□ -1.29
TRIM55-203ENST00000350034 ZKSCAN8Q15776 578 aaPredicted RBP7.02□□□□□ -1.29
TRIM55-203ENST00000350034 TMCO4Q5TGY1 634 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 PDPK2PQ6A1A2 396 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 KIAA0930Q6ICG6 404 aaPredicted RBP7.02□□□□□ -1.29
TRIM55-203ENST00000350034 KYAT3Q6YP21 454 aaKnown RBP7.02□□□□□ -1.29
TRIM55-203ENST00000350034 CCDC121Q6ZUS5 278 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 FAM47EQ6ZV65 393 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 CHST9Q7L1S5 443 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 TRPM8Q7Z2W7 1104 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 TMCO2Q7Z6W1 182 aaPredicted RBP7.02□□□□□ -1.29
TRIM55-203ENST00000350034 DNAJB7Q7Z6W7 309 aaPredicted RBP7.02□□□□□ -1.29
TRIM55-203ENST00000350034 ALYREFQ86V81 257 aaKnown RBP7.02□□□□□ -1.29
TRIM55-203ENST00000350034 KCNMB4Q86W47 210 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 CIR1Q86X95 450 aaPredicted RBP7.02□□□□□ -1.29
TRIM55-203ENST00000350034 TRIM42Q8IWZ5 723 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 NDUFAF2Q8N183 169 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 TMEM199Q8N511 208 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 IPMKQ8NFU5 416 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 OR52K2Q8NGK3 314 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 RAB3IL1Q8TBN0 382 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 ZNF398Q8TD17 642 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 C10orf82Q8WW14 230 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 WBP2Q969T9 261 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 PSMG2Q969U7 264 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 ZFRQ96KR1 1074 aaKnown RBP7.02□□□□□ -1.29
TRIM55-203ENST00000350034 PRICKLE1Q96MT3 831 aaPredicted RBP7.02□□□□□ -1.29
TRIM55-203ENST00000350034 ZNF778Q96MU6 729 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 KLHL5Q96PQ7 755 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 RNF38Q9H0F5 515 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 ZBP1Q9H171 429 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 MAGEH1Q9H213 219 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 MANSC1Q9H8J5 431 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 ACTR5Q9H9F9 607 aaPredicted RBP7.02□□□□□ -1.29
TRIM55-203ENST00000350034 SP110Q9HB58 689 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 CYP4F11Q9HBI6 524 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 IL23AQ9NPF7 189 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 HAUS2Q9NVX0 235 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 NSMCE4AQ9NXX6 385 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 ZFATQ9P243 1243 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 KLHL14Q9P2G3 628 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 STK39Q9UEW8 545 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 EMCNQ9ULC0 261 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 SLC12A4Q9UP95 1085 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 TCAF1Q9Y4C2 921 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 INSL5Q9Y5Q6 135 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 HTTP42858 3142 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.01□□□□□ -1.29
TRIM55-203ENST00000350034 ILVBLA1L0T0 632 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 TNFRSF10AO00220 468 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 TPP1O14773 563 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 MUSKO15146 869 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 TEX28O15482 410 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 KDELR3O43731 214 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 PLIN3O60664 434 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 GLRA3O75311 464 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 PMPCBO75439 489 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 CLDN11O75508 207 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 BPGMP07738 259 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 ATXN1LP0C7T5 689 aaKnown RBP7.01□□□□□ -1.29
TRIM55-203ENST00000350034 CTSAP10619 480 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 RAG1P15918 1043 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 BGNP21810 368 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 DNAJB1P25685 340 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 PSMA3P25788 255 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 GABRB3P28472 473 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 OR1E1P30953 314 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 CORO1AP31146 461 aaKnown RBP7.01□□□□□ -1.29
TRIM55-203ENST00000350034 SPRP35270 261 aaPredicted RBP7.01□□□□□ -1.29
TRIM55-203ENST00000350034 HADHAP40939 763 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 MAGEA9P43362 315 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 CHRNA4P43681 627 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 POLD2P49005 469 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 HARS2P49590 506 aaKnown RBP7.01□□□□□ -1.29
TRIM55-203ENST00000350034 SERPINB8P50452 374 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 FOXK2Q01167 660 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 DSC2Q02487 901 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 CREMQ03060 361 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 CDK18Q07002 472 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 CCDC15Q0P6D6 951 aa7.01□□□□□ -1.29
TRIM55-203ENST00000350034 TWF1Q12792 350 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms