RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 NVLO15381 856 aaKnown RBP16.05■□□□□ 0.16
COPE-202ENST00000349893 ZNF821O75541 412 aaPredicted RBP16.05■□□□□ 0.16
COPE-202ENST00000349893 CALCAP01258 141 aa16.05■□□□□ 0.16
COPE-202ENST00000349893 LIPCP11150 499 aa16.05■□□□□ 0.16
COPE-202ENST00000349893 ADRB3P13945 408 aa16.05■□□□□ 0.16
COPE-202ENST00000349893 UGT1A5P35504 534 aa16.05■□□□□ 0.16
COPE-202ENST00000349893 NEK3P51956 506 aa16.05■□□□□ 0.16
COPE-202ENST00000349893 CDH4P55283 916 aa16.05■□□□□ 0.16
COPE-202ENST00000349893 KRT83P78385 493 aa16.05■□□□□ 0.16
COPE-202ENST00000349893 SRSF6Q13247 344 aaKnown RBP16.05■□□□□ 0.16
COPE-202ENST00000349893 PDE1CQ14123 709 aaPredicted RBP16.05■□□□□ 0.16
COPE-202ENST00000349893 TGIF1Q15583 401 aa16.05■□□□□ 0.16
COPE-202ENST00000349893 FOXD4L6Q3SYB3 417 aaPredicted RBP16.05■□□□□ 0.16
COPE-202ENST00000349893 FOXD4L3Q6VB84 417 aaPredicted RBP16.05■□□□□ 0.16
COPE-202ENST00000349893 B3GNT8Q7Z7M8 397 aa16.05■□□□□ 0.16
COPE-202ENST00000349893 ATP11CQ8NB49 1132 aa16.05■□□□□ 0.16
COPE-202ENST00000349893 DENND6BQ8NEG7 585 aa16.05■□□□□ 0.16
COPE-202ENST00000349893 KAT5Q92993 513 aa16.05■□□□□ 0.16
COPE-202ENST00000349893 FEM1CQ96JP0 617 aa16.05■□□□□ 0.16
COPE-202ENST00000349893 NT5C1BQ96P26 610 aa16.05■□□□□ 0.16
COPE-202ENST00000349893 MED15Q96RN5 788 aa16.05■□□□□ 0.16
COPE-202ENST00000349893 C2orf49Q9BVC5 232 aaPredicted RBP16.05■□□□□ 0.16
COPE-202ENST00000349893 IL36AQ9UHA7 158 aa16.05■□□□□ 0.16
COPE-202ENST00000349893 VPS51Q9UID3 782 aa16.05■□□□□ 0.16
COPE-202ENST00000349893 CNTN6Q9UQ52 1028 aa16.05■□□□□ 0.16
COPE-202ENST00000349893 WASF2Q9Y6W5 498 aa16.05■□□□□ 0.16
COPE-202ENST00000349893 E5RJQ4 531 aa16.04■□□□□ 0.16
COPE-202ENST00000349893 FPGTO14772 594 aa16.04■□□□□ 0.16
COPE-202ENST00000349893 SMAD6O43541 496 aaKnown RBP16.04■□□□□ 0.16
COPE-202ENST00000349893 SNAP91O60641 907 aa16.04■□□□□ 0.16
COPE-202ENST00000349893 LEFTY1O75610 366 aa16.04■□□□□ 0.16
COPE-202ENST00000349893 GP1BBP13224 206 aa16.04■□□□□ 0.16
COPE-202ENST00000349893 RRM1P23921 792 aa16.04■□□□□ 0.16
COPE-202ENST00000349893 ITGB7P26010 798 aa16.04■□□□□ 0.16
COPE-202ENST00000349893 CCKBRP32239 447 aa16.04■□□□□ 0.16
COPE-202ENST00000349893 TLE1Q04724 770 aa16.04■□□□□ 0.16
COPE-202ENST00000349893 UBAP2LQ14157 1087 aaKnown RBP16.04■□□□□ 0.16
COPE-202ENST00000349893 TBR1Q16650 682 aa16.04■□□□□ 0.16
COPE-202ENST00000349893 ARSIQ5FYB1 569 aa16.04■□□□□ 0.16
COPE-202ENST00000349893 FOXD4L5Q5VV16 416 aaPredicted RBP16.04■□□□□ 0.16
COPE-202ENST00000349893 RAB11FIP2Q7L804 512 aa16.04■□□□□ 0.16
COPE-202ENST00000349893 RBFAQ8N0V3 343 aa16.04■□□□□ 0.16
COPE-202ENST00000349893 FBXO39Q8N4B4 442 aa16.04■□□□□ 0.16
COPE-202ENST00000349893 DCAF4L2Q8NA75 395 aa16.04■□□□□ 0.16
COPE-202ENST00000349893 LMO3Q8TAP4 145 aa16.04■□□□□ 0.16
COPE-202ENST00000349893 FOXD4L4Q8WXT5 416 aaPredicted RBP16.04■□□□□ 0.16
COPE-202ENST00000349893 SLC2A13Q96QE2 648 aa16.04■□□□□ 0.16
COPE-202ENST00000349893 LRRC61Q9BV99 259 aa16.04■□□□□ 0.16
COPE-202ENST00000349893 GEMIN8Q9NWZ8 242 aaKnown RBP16.04■□□□□ 0.16
COPE-202ENST00000349893 APOBEC3BQ9UH17 382 aaKnown RBP16.04■□□□□ 0.16
COPE-202ENST00000349893 VANGL2Q9ULK5 521 aa16.04■□□□□ 0.16
COPE-202ENST00000349893 PNMA8BQ9ULN7 279 aaPredicted RBP16.04■□□□□ 0.16
COPE-202ENST00000349893 PADI4Q9UM07 663 aa16.04■□□□□ 0.16
COPE-202ENST00000349893 PCDHGA4Q9Y5G9 962 aa16.04■□□□□ 0.16
COPE-202ENST00000349893 HS3ST4Q9Y661 456 aa16.04■□□□□ 0.16
COPE-202ENST00000349893 NOTCH2Q04721 2471 aa16.04■□□□□ 0.16
COPE-202ENST00000349893 NBASA2RRP1 2371 aa16.04■□□□□ 0.16
COPE-202ENST00000349893 D6RAR5 112 aa16.03■□□□□ 0.16
COPE-202ENST00000349893 PPFIA2O75334 1257 aa16.03■□□□□ 0.16
COPE-202ENST00000349893 GLI1P08151 1106 aa16.03■□□□□ 0.16
COPE-202ENST00000349893 L1CAMP32004 1257 aa16.03■□□□□ 0.16
COPE-202ENST00000349893 SYKP43405 635 aa16.03■□□□□ 0.16
COPE-202ENST00000349893 FMO5P49326 533 aa16.03■□□□□ 0.16
COPE-202ENST00000349893 CDK17Q00537 523 aa16.03■□□□□ 0.16
COPE-202ENST00000349893 FKBP3Q00688 224 aaKnown RBP16.03■□□□□ 0.16
COPE-202ENST00000349893 GCNT1Q02742 428 aa16.03■□□□□ 0.16
COPE-202ENST00000349893 DNM1Q05193 864 aaKnown RBP16.03■□□□□ 0.16
COPE-202ENST00000349893 MAPK8IP2Q13387 824 aaPredicted RBP16.03■□□□□ 0.16
COPE-202ENST00000349893 COBLL1Q53SF7 1204 aa16.03■□□□□ 0.16
COPE-202ENST00000349893 PRRT3Q5FWE3 981 aa16.03■□□□□ 0.16
COPE-202ENST00000349893 DENND1BQ6P3S1 775 aa16.03■□□□□ 0.16
COPE-202ENST00000349893 C22orf39Q6P5X5 142 aa16.03■□□□□ 0.16
COPE-202ENST00000349893 DPY19L3Q6ZPD9 716 aa16.03■□□□□ 0.16
COPE-202ENST00000349893 SETD3Q86TU7 594 aaPredicted RBP16.03■□□□□ 0.16
COPE-202ENST00000349893 SMYD4Q8IYR2 804 aaPredicted RBP16.03■□□□□ 0.16
COPE-202ENST00000349893 PPM1KQ8N3J5 372 aa16.03■□□□□ 0.16
COPE-202ENST00000349893 GRIN3AQ8TCU5 1115 aa16.03■□□□□ 0.16
COPE-202ENST00000349893 CLPBQ9H078 707 aa16.03■□□□□ 0.16
COPE-202ENST00000349893 MUC3BQ9H195 1237 aa16.03■□□□□ 0.16
COPE-202ENST00000349893 SLC25A18Q9H1K4 315 aa16.03■□□□□ 0.16
COPE-202ENST00000349893 TCEAL2Q9H3H9 227 aaPredicted RBP16.03■□□□□ 0.16
COPE-202ENST00000349893 FAM204AQ9H8W3 233 aa16.03■□□□□ 0.16
COPE-202ENST00000349893 METTL14Q9HCE5 456 aaKnown RBP16.03■□□□□ 0.16
COPE-202ENST00000349893 ASNSD1Q9NWL6 643 aa16.03■□□□□ 0.16
COPE-202ENST00000349893 DDIT4Q9NX09 232 aa16.03■□□□□ 0.16
COPE-202ENST00000349893 ARMCX3Q9UH62 379 aaPredicted RBP16.03■□□□□ 0.16
COPE-202ENST00000349893 IPO11Q9UI26 975 aaKnown RBP16.03■□□□□ 0.16
COPE-202ENST00000349893 YY2O15391 372 aa16.02■□□□□ 0.16
COPE-202ENST00000349893 NDUFA8P51970 172 aa16.02■□□□□ 0.16
COPE-202ENST00000349893 ADKP55263 362 aaKnown RBP16.02■□□□□ 0.16
COPE-202ENST00000349893 PTK2BQ14289 1009 aa16.02■□□□□ 0.16
COPE-202ENST00000349893 TAF5Q15542 800 aa16.02■□□□□ 0.16
COPE-202ENST00000349893 KRBA2Q6ZNG9 492 aa16.02■□□□□ 0.16
COPE-202ENST00000349893 DTX1Q86Y01 620 aa16.02■□□□□ 0.16
COPE-202ENST00000349893 ZNF683Q8IZ20 524 aa16.02■□□□□ 0.16
COPE-202ENST00000349893 PHACTR4Q8IZ21 702 aa16.02■□□□□ 0.16
COPE-202ENST00000349893 FUCA2Q9BTY2 467 aa16.02■□□□□ 0.16
COPE-202ENST00000349893 STRADBQ9C0K7 418 aa16.02■□□□□ 0.16
COPE-202ENST00000349893 SEPT3Q9UH03 358 aa16.02■□□□□ 0.16
COPE-202ENST00000349893 RABGEF1Q9UJ41 708 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms