RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 SERPINB8P50452 374 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 CSE1LP55060 971 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 YBEYP58557 167 aaPredicted RBP14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 DEFB103AP81534 67 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 DSG1Q02413 1049 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 IL10RBQ08334 325 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 CES4AQ5XG92 561 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 FBXW10Q5XX13 1052 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ATG16L1Q676U5 607 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ESRP1Q6NXG1 681 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 SLC39A11Q8N1S5 342 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ERP27Q96DN0 273 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 MCMBPQ9BTE3 642 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 MYLK2Q9H1R3 596 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 TCAF1Q9Y4C2 921 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 MYLKQ15746 1914 aa14.31□□□□□ -0.12
CDK5RAP1-202ENST00000346416 A0A0G2JND7 137 aa14.31□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ABHD14A-ACY1A0A1B0GW23 586 aa14.31□□□□□ -0.12
CDK5RAP1-202ENST00000346416 TIMM44O43615 452 aa14.31□□□□□ -0.12
CDK5RAP1-202ENST00000346416 PLIN3O60664 434 aa14.31□□□□□ -0.12
CDK5RAP1-202ENST00000346416 VAPBO95292 243 aa14.31□□□□□ -0.12
CDK5RAP1-202ENST00000346416 GMPRP36959 345 aa14.31□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ALDH1A3P47895 512 aa14.31□□□□□ -0.12
CDK5RAP1-202ENST00000346416 DSC2Q02487 901 aa14.31□□□□□ -0.12
CDK5RAP1-202ENST00000346416 INSCQ1MX18 579 aa14.31□□□□□ -0.12
CDK5RAP1-202ENST00000346416 TPGS2Q68CL5 300 aa14.31□□□□□ -0.12
CDK5RAP1-202ENST00000346416 KLHDC10Q6PID8 442 aa14.31□□□□□ -0.12
CDK5RAP1-202ENST00000346416 NLRP9Q7RTR0 991 aa14.31□□□□□ -0.12
CDK5RAP1-202ENST00000346416 PACS2Q86VP3 889 aa14.31□□□□□ -0.12
CDK5RAP1-202ENST00000346416 SLC25A41Q8N5S1 370 aa14.31□□□□□ -0.12
CDK5RAP1-202ENST00000346416 PTCD2Q8WV60 388 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP1-202ENST00000346416 VPS39Q96JC1 886 aa14.31□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ECT2Q9H8V3 914 aa14.31□□□□□ -0.12
CDK5RAP1-202ENST00000346416 CAB39LQ9H9S4 337 aa14.31□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ARNT2Q9HBZ2 717 aa14.31□□□□□ -0.12
CDK5RAP1-202ENST00000346416 VPS45Q9NRW7 570 aa14.31□□□□□ -0.12
CDK5RAP1-202ENST00000346416 TRPM5Q9NZQ8 1165 aa14.31□□□□□ -0.12
CDK5RAP1-202ENST00000346416 HSFX1Q9UBD0 423 aa14.31□□□□□ -0.12
CDK5RAP1-202ENST00000346416 MIA3Q5JRA6 1907 aa14.31□□□□□ -0.12
CDK5RAP1-202ENST00000346416 E2F8A0AVK6 867 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 TTC24A2A3L6 582 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 MMP2P08253 660 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 RFC2P35250 354 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ETFBP38117 255 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ARCN1P48444 511 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 SLC11A2P49281 568 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 NCALDP61601 193 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 TNK2Q07912 1038 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 BTG3Q14201 252 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 IHHQ14623 411 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 CNGA3Q16281 694 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 TAF12Q16514 161 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 C5orf22Q49AR2 442 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 FASTKD1Q53R41 847 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 DENND1CQ8IV53 801 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 PGBD5Q8N414 524 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 RAB3IL1Q8TBN0 382 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 MYRFLQ96LU7 910 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 C7orf26Q96N11 449 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 RC3H2Q9HBD1 1191 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 MRM3Q9HC36 420 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 NSMCE4AQ9NXX6 385 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 TMEM216Q9P0N5 145 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 SLC2A6Q9UGQ3 507 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 YIPF1Q9Y548 306 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 PRKCGP05129 697 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 DLDP09622 509 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ITGB8P26012 769 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ARNTP27540 789 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 OCRLQ01968 901 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 SEPT6Q14141 434 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 LBRQ14739 615 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 DLG2Q15700 870 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ZCCHC23Q6ZST2 131 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ACVR1CQ8NER5 493 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ZNF395Q9H8N7 513 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 KCNK13Q9HB14 408 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ATP13A1Q9HD20 1204 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 SLC40A1Q9NP59 571 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 GKN1Q9NS71 199 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 TREX1Q9NSU2 369 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ZNF358Q9NW07 568 aa14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ZFP37Q9Y6Q3 630 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 KIAA0100Q14667 2235 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP1-202ENST00000346416 A0A096LPK6 155 aa14.29□□□□□ -0.12
CDK5RAP1-202ENST00000346416 A0A0D9SEW6 157 aa14.29□□□□□ -0.12
CDK5RAP1-202ENST00000346416 PRAMEF11O60813 436 aa14.29□□□□□ -0.12
CDK5RAP1-202ENST00000346416 KLKB1P03952 638 aa14.29□□□□□ -0.12
CDK5RAP1-202ENST00000346416 PROCP04070 461 aa14.29□□□□□ -0.12
CDK5RAP1-202ENST00000346416 CSF2RAP15509 400 aa14.29□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ARFIP2P53365 341 aa14.29□□□□□ -0.12
CDK5RAP1-202ENST00000346416 RPS24P62847 133 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP1-202ENST00000346416 PLD1Q13393 1074 aa14.29□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ZC3HC1Q86WB0 502 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP1-202ENST00000346416 CNTN4Q8IWV2 1026 aa14.29□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ARRDC2Q8TBH0 407 aa14.29□□□□□ -0.12
CDK5RAP1-202ENST00000346416 AUTS2Q8WXX7 1259 aa14.29□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ZNF333Q96JL9 665 aa14.29□□□□□ -0.12
CDK5RAP1-202ENST00000346416 C20orf27Q9GZN8 174 aa14.29□□□□□ -0.12
CDK5RAP1-202ENST00000346416 RNF38Q9H0F5 515 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms