RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 CNTNAP2Q9UHC6 1331 aa15.68■□□□□ 0.1
SRPK1-201ENST00000346162 ABCC6O95255 1503 aa15.68■□□□□ 0.1
SRPK1-201ENST00000346162 HACD1B0YJ81 288 aa15.68■□□□□ 0.1
SRPK1-201ENST00000346162 FARP2O94887 1054 aaPredicted RBP15.68■□□□□ 0.1
SRPK1-201ENST00000346162 PABPC4LP0CB38 370 aaKnown RBP15.68■□□□□ 0.1
SRPK1-201ENST00000346162 DLG1Q12959 904 aa15.68■□□□□ 0.1
SRPK1-201ENST00000346162 CTXN3Q4LDR2 81 aa15.68■□□□□ 0.1
SRPK1-201ENST00000346162 EFL1Q7Z2Z2 1120 aaKnown RBP15.68■□□□□ 0.1
SRPK1-201ENST00000346162 SLCO6A1Q86UG4 719 aa15.68■□□□□ 0.1
SRPK1-201ENST00000346162 ASZ1Q8WWH4 475 aa15.68■□□□□ 0.1
SRPK1-201ENST00000346162 QKIQ96PU8 341 aaKnown RBP eCLIP15.68■□□□□ 0.18e-10■■■■■ 44.4
SRPK1-201ENST00000346162 RBBP8Q99708 897 aa15.68■□□□□ 0.1
SRPK1-201ENST00000346162 LIN28AQ9H9Z2 209 aaKnown RBP15.68■□□□□ 0.1
SRPK1-201ENST00000346162 HTR3EA5X5Y0 456 aa15.68■□□□□ 0.1
SRPK1-201ENST00000346162 F5H5T6 163 aa15.68■□□□□ 0.1
SRPK1-201ENST00000346162 USP12O75317 370 aa15.68■□□□□ 0.1
SRPK1-201ENST00000346162 ADSSP30520 456 aa15.68■□□□□ 0.1
SRPK1-201ENST00000346162 PSEN2P49810 448 aa15.68■□□□□ 0.1
SRPK1-201ENST00000346162 CYP51A1Q16850 503 aa15.68■□□□□ 0.1
SRPK1-201ENST00000346162 HSDL1Q3SXM5 330 aa15.68■□□□□ 0.1
SRPK1-201ENST00000346162 SAMD4BQ5PRF9 694 aaKnown RBP15.68■□□□□ 0.1
SRPK1-201ENST00000346162 FAAH2Q6GMR7 532 aa15.68■□□□□ 0.1
SRPK1-201ENST00000346162 SNRNP25Q9BV90 132 aaKnown RBP15.68■□□□□ 0.1
SRPK1-201ENST00000346162 YIPF2Q9BWQ6 316 aa15.68■□□□□ 0.1
SRPK1-201ENST00000346162 SLC4A5Q9BY07 1137 aa15.68■□□□□ 0.1
SRPK1-201ENST00000346162 ROGDIQ9GZN7 287 aa15.68■□□□□ 0.1
SRPK1-201ENST00000346162 NT5MQ9NPB1 228 aa15.68■□□□□ 0.1
SRPK1-201ENST00000346162 ATP6V1HQ9UI12 483 aa15.68■□□□□ 0.1
SRPK1-201ENST00000346162 LNPEPQ9UIQ6 1025 aa15.68■□□□□ 0.1
SRPK1-201ENST00000346162 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.67■□□□□ 0.1
SRPK1-201ENST00000346162 KPNA6O60684 536 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 TRUB2O95900 331 aaKnown RBP15.67■□□□□ 0.1
SRPK1-201ENST00000346162 PGAM1P18669 254 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 PHC1P78364 1004 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 PLIN5Q00G26 463 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 ZNF177Q13360 481 aaPredicted RBP15.67■□□□□ 0.1
SRPK1-201ENST00000346162 GATAD2AQ86YP4 633 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 ULBP1Q9BZM6 244 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 VTI1BQ9UEU0 232 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 SLC13A4Q9UKG4 626 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 VPS9D1Q9Y2B5 631 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 J3QRK9 145 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 CHADO15335 359 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 SOAT2O75908 522 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 AKT1P31749 480 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 PRKAA1Q13131 559 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 C16orf46Q6P387 395 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 SZRD1Q7Z422 152 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 C19orf18Q8NEA5 215 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 FBXL8Q96CD0 374 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 STN1Q9H668 368 aaKnown RBP15.67■□□□□ 0.1
SRPK1-201ENST00000346162 POPDC2Q9HBU9 364 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 SLC7A8Q9UHI5 535 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 DGKBQ9Y6T7 804 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 SLC12A8A0AV02 714 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 FKBP9O95302 570 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 S100A9P06702 114 aaKnown RBP15.67■□□□□ 0.1
SRPK1-201ENST00000346162 YBX3P16989 372 aaKnown RBP eCLIP15.67■□□□□ 0.14e-7■■■□□ 14.8
SRPK1-201ENST00000346162 TUBP50607 506 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 TMEM214Q6NUQ4 689 aaKnown RBP15.67■□□□□ 0.1
SRPK1-201ENST00000346162 PRR23CQ6ZRP0 262 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 FKBP9P1Q75LS8 142 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 CLEC4DQ8WXI8 215 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 SMARCD1Q96GM5 515 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 HSFY1Q96LI6 401 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 GAD1Q99259 594 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 RIC8BQ9NVN3 520 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 DNAJB4Q9UDY4 337 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 TRHDEQ9UKU6 1024 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 PCDHGB4Q9UN71 923 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 PRPF4O43172 522 aaKnown RBP eCLIP15.67■□□□□ 0.1
SRPK1-201ENST00000346162 MT-CO1P00395 513 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 C4BPBP20851 252 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 CSHL1Q14406 222 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 VSTM1Q6UX27 236 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 LRRC8DQ7L1W4 858 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 LENG9Q96B70 501 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 PLEKHA8Q96JA3 519 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 SENP8Q96LD8 212 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 NSMCE3Q96MG7 304 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 CDH22Q9UJ99 828 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 PPM1HQ9ULR3 514 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 PMF1-BGLAPU3KQ54 211 aa15.67■□□□□ 0.1
SRPK1-201ENST00000346162 A0A096LPK6 155 aa15.66■□□□□ 0.1
SRPK1-201ENST00000346162 C2orf81A6NN90 581 aa15.66■□□□□ 0.1
SRPK1-201ENST00000346162 MRASO14807 208 aa15.66■□□□□ 0.1
SRPK1-201ENST00000346162 MAGEB3O15480 346 aa15.66■□□□□ 0.1
SRPK1-201ENST00000346162 LTFP02788 710 aa15.66■□□□□ 0.1
SRPK1-201ENST00000346162 NOS2P35228 1153 aa15.66■□□□□ 0.1
SRPK1-201ENST00000346162 GRIA3P42263 894 aa15.66■□□□□ 0.1
SRPK1-201ENST00000346162 ALDH7A1P49419 539 aaKnown RBP15.66■□□□□ 0.1
SRPK1-201ENST00000346162 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.66■□□□□ 0.1
SRPK1-201ENST00000346162 ASTE1Q2TB18 679 aaPredicted RBP15.66■□□□□ 0.1
SRPK1-201ENST00000346162 ZIK1Q3SY52 487 aaPredicted RBP15.66■□□□□ 0.1
SRPK1-201ENST00000346162 POTEHQ6S545 545 aa15.66■□□□□ 0.1
SRPK1-201ENST00000346162 AMER2Q8N7J2 671 aa15.66■□□□□ 0.1
SRPK1-201ENST00000346162 FAM136AQ96C01 138 aa15.66■□□□□ 0.1
SRPK1-201ENST00000346162 TINF2Q9BSI4 451 aa15.66■□□□□ 0.1
SRPK1-201ENST00000346162 COL1A1P02452 1464 aaPredicted RBP15.66■□□□□ 0.1
SRPK1-201ENST00000346162 TCRBV7S2A1N4TA0A589 114 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms