RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 SYBUQ9NX95 663 aa16.13■□□□□ 0.17
PDGFB-201ENST00000331163 CFAP73A6NFT4 308 aa16.13■□□□□ 0.17
PDGFB-201ENST00000331163 STC2O76061 302 aa16.13■□□□□ 0.17
PDGFB-201ENST00000331163 TARSP26639 723 aaKnown RBP16.13■□□□□ 0.17
PDGFB-201ENST00000331163 GMPRP36959 345 aa16.13■□□□□ 0.17
PDGFB-201ENST00000331163 NR2C2P49116 596 aa16.13■□□□□ 0.17
PDGFB-201ENST00000331163 POLE2P56282 527 aa16.13■□□□□ 0.17
PDGFB-201ENST00000331163 KDSRQ06136 332 aa16.13■□□□□ 0.17
PDGFB-201ENST00000331163 PM20D1Q6GTS8 502 aa16.13■□□□□ 0.17
PDGFB-201ENST00000331163 CYB5D2Q8WUJ1 264 aa16.13■□□□□ 0.17
PDGFB-201ENST00000331163 TLCD1Q96CP7 247 aa16.13■□□□□ 0.17
PDGFB-201ENST00000331163 TSNARE1Q96NA8 513 aa16.13■□□□□ 0.17
PDGFB-201ENST00000331163 AGO1Q9UL18 857 aaKnown RBP16.13■□□□□ 0.17
PDGFB-201ENST00000331163 UGT1A9O60656 530 aa16.12■□□□□ 0.17
PDGFB-201ENST00000331163 KLKB1P03952 638 aa16.12■□□□□ 0.17
PDGFB-201ENST00000331163 ABL2P42684 1182 aa16.12■□□□□ 0.17
PDGFB-201ENST00000331163 GLRBP48167 497 aa16.12■□□□□ 0.17
PDGFB-201ENST00000331163 SGSHP51688 502 aa16.12■□□□□ 0.17
PDGFB-201ENST00000331163 PTPRRQ15256 657 aa16.12■□□□□ 0.17
PDGFB-201ENST00000331163 CCDC6Q16204 474 aa16.12■□□□□ 0.17
PDGFB-201ENST00000331163 SYDE1Q6ZW31 735 aaPredicted RBP16.12■□□□□ 0.17
PDGFB-201ENST00000331163 CYP4V2Q6ZWL3 525 aaPredicted RBP16.12■□□□□ 0.17
PDGFB-201ENST00000331163 SPATA21Q7Z572 469 aa16.12■□□□□ 0.17
PDGFB-201ENST00000331163 MRPL43Q8N983 215 aaKnown RBP16.12■□□□□ 0.17
PDGFB-201ENST00000331163 SPPL3Q8TCT6 385 aa16.12■□□□□ 0.17
PDGFB-201ENST00000331163 PPP1R36Q96LQ0 422 aa16.12■□□□□ 0.17
PDGFB-201ENST00000331163 RMDN2Q96LZ7 410 aa16.12■□□□□ 0.17
PDGFB-201ENST00000331163 UGT1A7Q9HAW7 530 aa16.12■□□□□ 0.17
PDGFB-201ENST00000331163 UGT1A10Q9HAW8 530 aa16.12■□□□□ 0.17
PDGFB-201ENST00000331163 UGT1A8Q9HAW9 530 aa16.12■□□□□ 0.17
PDGFB-201ENST00000331163 SLC12A4Q9UP95 1085 aa16.12■□□□□ 0.17
PDGFB-201ENST00000331163 PCDHB9Q9Y5E1 797 aa16.12■□□□□ 0.17
PDGFB-201ENST00000331163 MGAMO43451 1857 aa16.12■□□□□ 0.17
PDGFB-201ENST00000331163 CAV1Q03135 178 aa16.12■□□□□ 0.17
PDGFB-201ENST00000331163 TPGS2Q68CL5 300 aa16.12■□□□□ 0.17
PDGFB-201ENST00000331163 IGDCC3Q8IVU1 814 aa16.12■□□□□ 0.17
PDGFB-201ENST00000331163 PDZD8Q8NEN9 1154 aa16.12■□□□□ 0.17
PDGFB-201ENST00000331163 SLC9A7Q96T83 725 aa16.12■□□□□ 0.17
PDGFB-201ENST00000331163 CYLDQ9NQC7 956 aa16.12■□□□□ 0.17
PDGFB-201ENST00000331163 UBA2Q9UBT2 640 aaPredicted RBP16.12■□□□□ 0.17
PDGFB-201ENST00000331163 XIRP2A4UGR9 3374 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 TBC1D3BA6NDS4 549 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 TRIM49D1C9J1S8 452 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 TMEM189-UBE2V1I3L0A0 370 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 BAIAP3O94812 1187 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 KITP10721 976 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 PTPN2P17706 415 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 ITGB6P18564 788 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 KRT4P19013 534 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 GEN1Q17RS7 908 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 TEX44Q53QW1 395 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 RAB41Q5JT25 222 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 RHBDF2Q6PJF5 856 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 FITM2Q8N6M3 262 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 SHCBP1LQ9BZQ2 653 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 BRD8Q9H0E9 1235 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 EBF2Q9HAK2 575 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 G3BP2Q9UN86 482 aaKnown RBP16.11■□□□□ 0.17
PDGFB-201ENST00000331163 DNAJC6O75061 913 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 PPFIA2O75334 1257 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 SLC6A4P31645 630 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 STK19P49842 368 aaPredicted RBP16.11■□□□□ 0.17
PDGFB-201ENST00000331163 RENBPP51606 427 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 CTBP1Q13363 440 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 RAB33AQ14088 237 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 CNGA3Q16281 694 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 FLCNQ8NFG4 579 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.11■□□□□ 0.17
PDGFB-201ENST00000331163 PAFAH2Q99487 392 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 TSC22D3Q99576 134 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 ADAM7Q9H2U9 754 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 EVLQ9UI08 416 aaPredicted RBP16.11■□□□□ 0.17
PDGFB-201ENST00000331163 MOSPD1Q9UJG1 213 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 HAO1Q9UJM8 370 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 SLC39A10Q9ULF5 831 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 DRG1Q9Y295 367 aaKnown RBP16.11■□□□□ 0.17
PDGFB-201ENST00000331163 USP3Q9Y6I4 520 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 MT-CO1P00395 513 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 CCND1P24385 295 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 NNMTP40261 264 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 ITIH4Q14624 930 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 RTL3Q8N8U3 475 aaKnown RBP16.11■□□□□ 0.17
PDGFB-201ENST00000331163 SLC46A2Q9BY10 475 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 STMN4Q9H169 189 aaPredicted RBP16.11■□□□□ 0.17
PDGFB-201ENST00000331163 ZDHHC18Q9NUE0 388 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 CRYL1Q9Y2S2 319 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 SPTBN2O15020 2390 aa16.11■□□□□ 0.17
PDGFB-201ENST00000331163 SDR42E2A6NKP2 422 aa16.1■□□□□ 0.17
PDGFB-201ENST00000331163 HLA-DQB2P05538 268 aa16.1■□□□□ 0.17
PDGFB-201ENST00000331163 TYK2P29597 1187 aa16.1■□□□□ 0.17
PDGFB-201ENST00000331163 WNT3AP56704 352 aa16.1■□□□□ 0.17
PDGFB-201ENST00000331163 TNK2Q07912 1038 aa16.1■□□□□ 0.17
PDGFB-201ENST00000331163 RNASEH2BQ5TBB1 312 aaKnown RBP16.1■□□□□ 0.17
PDGFB-201ENST00000331163 ELMSAN1Q6PJG2 1045 aa16.1■□□□□ 0.17
PDGFB-201ENST00000331163 FAM43BQ6ZT52 329 aaPredicted RBP16.1■□□□□ 0.17
PDGFB-201ENST00000331163 PIGWQ7Z7B1 504 aa16.1■□□□□ 0.17
PDGFB-201ENST00000331163 EXOC3L1Q86VI1 746 aa16.1■□□□□ 0.17
PDGFB-201ENST00000331163 ITFG1Q8TB96 612 aa16.1■□□□□ 0.17
PDGFB-201ENST00000331163 MAGEC3Q8TD91 643 aa16.1■□□□□ 0.17
PDGFB-201ENST00000331163 TRABDQ9H4I3 376 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms