RNA–Protein interactions for RNA: ENST00000299240.10

TTC17-202, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 1 (best) BASIC

Gene TTC17, Length 3,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-202ENST00000299240 ZBTB16Q05516 673 aa12.8□□□□□ -0.36
TTC17-202ENST00000299240 PRKD1Q15139 912 aaPredicted RBP12.8□□□□□ -0.36
TTC17-202ENST00000299240 TMEM240Q5SV17 173 aa12.8□□□□□ -0.36
TTC17-202ENST00000299240 TADA2BQ86TJ2 420 aa12.8□□□□□ -0.36
TTC17-202ENST00000299240 TBL1YQ9BQ87 522 aa12.8□□□□□ -0.36
TTC17-202ENST00000299240 TRIM62Q9BVG3 475 aa12.8□□□□□ -0.36
TTC17-202ENST00000299240 UBE2OQ9C0C9 1292 aaKnown RBP12.8□□□□□ -0.36
TTC17-202ENST00000299240 XAB2Q9HCS7 855 aaKnown RBP12.8□□□□□ -0.36
TTC17-202ENST00000299240 ASAH2Q9NR71 780 aa12.8□□□□□ -0.36
TTC17-202ENST00000299240 PCDHB9Q9Y5E1 797 aa12.8□□□□□ -0.36
TTC17-202ENST00000299240 TMEM189-UBE2V1I3L0A0 370 aa12.8□□□□□ -0.36
TTC17-202ENST00000299240 AXIN1O15169 862 aa12.8□□□□□ -0.36
TTC17-202ENST00000299240 FOXN2P32314 431 aa12.8□□□□□ -0.36
TTC17-202ENST00000299240 GALNT2Q10471 571 aa12.8□□□□□ -0.36
TTC17-202ENST00000299240 USP10Q14694 798 aaKnown RBP12.8□□□□□ -0.36
TTC17-202ENST00000299240 ARMC12Q5T9G4 340 aa12.8□□□□□ -0.36
TTC17-202ENST00000299240 GKAP1Q5VSY0 366 aaPredicted RBP12.8□□□□□ -0.36
TTC17-202ENST00000299240 KCNMB4Q86W47 210 aa12.8□□□□□ -0.36
TTC17-202ENST00000299240 SLC26A11Q86WA9 606 aa12.8□□□□□ -0.36
TTC17-202ENST00000299240 OR13C4Q8NGS5 318 aa12.8□□□□□ -0.36
TTC17-202ENST00000299240 TMEM175Q9BSA9 504 aa12.8□□□□□ -0.36
TTC17-202ENST00000299240 FAM124BQ9H5Z6 455 aaPredicted RBP12.8□□□□□ -0.36
TTC17-202ENST00000299240 SCNN1AP37088 669 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 IL9RQ01113 521 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 DSG1Q02413 1049 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 GNA12Q03113 381 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 SEMA3BQ13214 749 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 RPS27LQ71UM5 84 aaKnown RBP12.79□□□□□ -0.36
TTC17-202ENST00000299240 CACNA2D3Q8IZS8 1091 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 SH3RF2Q8TEC5 729 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 TLCD1Q96CP7 247 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 HAPLN3Q96S86 360 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 PRR23AA6NEV1 266 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 NRIP1P48552 1158 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 IRF9Q00978 393 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 XRCC4Q13426 336 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 APCDD1Q8J025 514 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 EIF1ADQ8N9N8 165 aaKnown RBP12.79□□□□□ -0.36
TTC17-202ENST00000299240 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.79□□□□□ -0.36
TTC17-202ENST00000299240 HDAC10Q969S8 669 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 SRPK1Q96SB4 655 aaKnown RBP12.79□□□□□ -0.36
TTC17-202ENST00000299240 ROPN1BQ9BZX4 212 aaPredicted RBP12.79□□□□□ -0.36
TTC17-202ENST00000299240 ROPN1Q9HAT0 212 aaPredicted RBP12.79□□□□□ -0.36
TTC17-202ENST00000299240 NOD2Q9HC29 1040 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 ARHGEF38Q9NXL2 777 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 EVLQ9UI08 416 aaPredicted RBP12.79□□□□□ -0.36
TTC17-202ENST00000299240 MTO1Q9Y2Z2 717 aaKnown RBP12.79□□□□□ -0.36
TTC17-202ENST00000299240 ZNF638Q14966 1978 aaKnown RBP12.79□□□□□ -0.36
TTC17-202ENST00000299240 ZNF236Q9UL36 1845 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 SNRPAP09012 282 aaKnown RBP12.79□□□□□ -0.36
TTC17-202ENST00000299240 ALPIP09923 528 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 PMLP29590 882 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 CSKP41240 450 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 WASP42768 502 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 RENBPP51606 427 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 RHOAP61586 193 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 SEMA5AQ13591 1074 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 SHHQ15465 462 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 NAPEPLDQ6IQ20 393 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 CAMK1DQ8IU85 385 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 CCNYL1Q8N7R7 359 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 CYB5D2Q8WUJ1 264 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 CERS2Q96G23 380 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 TBATAQ96M53 351 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 GBA3Q9H227 469 aa12.79□□□□□ -0.36
TTC17-202ENST00000299240 MRPS23Q9Y3D9 190 aaKnown RBP12.79□□□□□ -0.36
TTC17-202ENST00000299240 HACD1B0YJ81 288 aa12.78□□□□□ -0.36
TTC17-202ENST00000299240 MATN3O15232 486 aa12.78□□□□□ -0.36
TTC17-202ENST00000299240 KRT38O76015 456 aa12.78□□□□□ -0.36
TTC17-202ENST00000299240 AP2A1O95782 977 aa12.78□□□□□ -0.36
TTC17-202ENST00000299240 SLC12A2P55011 1212 aa12.78□□□□□ -0.36
TTC17-202ENST00000299240 LBRQ14739 615 aaKnown RBP12.78□□□□□ -0.36
TTC17-202ENST00000299240 ANKRD20A4Q4UJ75 823 aa12.78□□□□□ -0.36
TTC17-202ENST00000299240 ZNF789Q5FWF6 425 aa12.78□□□□□ -0.36
TTC17-202ENST00000299240 TAS2R42Q7RTR8 314 aa12.78□□□□□ -0.36
TTC17-202ENST00000299240 SLC41A1Q8IVJ1 513 aa12.78□□□□□ -0.36
TTC17-202ENST00000299240 DCAKDQ8WVC6 231 aa12.78□□□□□ -0.36
TTC17-202ENST00000299240 ELMO2Q96JJ3 720 aa12.78□□□□□ -0.36
TTC17-202ENST00000299240 PRICKLE1Q96MT3 831 aaPredicted RBP12.78□□□□□ -0.36
TTC17-202ENST00000299240 SLC46A2Q9BY10 475 aa12.78□□□□□ -0.36
TTC17-202ENST00000299240 OSBPL2Q9H1P3 480 aa12.78□□□□□ -0.36
TTC17-202ENST00000299240 ABCB8Q9NUT2 735 aa12.78□□□□□ -0.36
TTC17-202ENST00000299240 GRID1Q9ULK0 1009 aa12.78□□□□□ -0.36
TTC17-202ENST00000299240 SMAD6O43541 496 aaKnown RBP12.78□□□□□ -0.36
TTC17-202ENST00000299240 LYPLA1O75608 230 aaPredicted RBP12.78□□□□□ -0.36
TTC17-202ENST00000299240 MAGEA11P43364 429 aa12.78□□□□□ -0.36
TTC17-202ENST00000299240 CDH17Q12864 832 aa12.78□□□□□ -0.36
TTC17-202ENST00000299240 PPIGQ13427 754 aaKnown RBP eCLIP12.78□□□□□ -0.361e-6■■□□□ 13.9
TTC17-202ENST00000299240 HDAC11Q96DB2 347 aa12.78□□□□□ -0.36
TTC17-202ENST00000299240 FRMD8P1Q9BZ68 369 aaPredicted RBP12.78□□□□□ -0.36
TTC17-202ENST00000299240 PNPLA8Q9NP80 782 aa12.78□□□□□ -0.36
TTC17-202ENST00000299240 UBA2Q9UBT2 640 aaPredicted RBP12.78□□□□□ -0.36
TTC17-202ENST00000299240 FAM50BQ9Y247 325 aa12.78□□□□□ -0.36
TTC17-202ENST00000299240 BHMG1C9JSJ3 638 aaPredicted RBP12.77□□□□□ -0.36
TTC17-202ENST00000299240 RHOQP17081 205 aa12.77□□□□□ -0.36
TTC17-202ENST00000299240 CTSOP43234 321 aaPredicted RBP12.77□□□□□ -0.36
TTC17-202ENST00000299240 LGSNQ5TDP6 509 aa12.77□□□□□ -0.36
TTC17-202ENST00000299240 GET4Q7L5D6 327 aaPredicted RBP12.77□□□□□ -0.36
TTC17-202ENST00000299240 TMEM25Q86YD3 366 aa12.77□□□□□ -0.36
TTC17-202ENST00000299240 SEC16BQ96JE7 1060 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms