RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 PCLAFQ15004 111 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 PDCD2Q16342 344 aaPredicted RBP6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 TCTN1Q2MV58 587 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 LINGO4Q6UY18 593 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 RINLQ6ZS11 566 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 RGS9BPQ6ZS82 235 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 BNIPLQ7Z465 357 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 EFHBQ8N7U6 833 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 ZNF781Q8N8C0 355 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 RTL3Q8N8U3 475 aaKnown RBP6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 SNX31Q8N9S9 440 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 PHF21BQ96EK2 531 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 PGAP3Q96FM1 320 aaPredicted RBP6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 NSL1Q96IY1 281 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 UROC1Q96N76 676 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 RAB3IPQ96QF0 476 aaPredicted RBP6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 PKMYT1Q99640 499 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 MIPEPQ99797 713 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 SEMA3CQ99985 751 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 ZYG11BQ9C0D3 744 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 WWP1Q9H0M0 922 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 FBXO44Q9H4M3 255 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 NMRAL1Q9HBL8 299 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 CASS4Q9NQ75 786 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 PRDM5Q9NQX1 630 aaPredicted RBP6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 ARHGEF3Q9NR81 526 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 COPG2Q9UBF2 871 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 APOBEC2Q9Y235 224 aaKnown RBP6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 AAR2Q9Y312 384 aaKnown RBP6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 UBA6A0AVT1 1052 aaPredicted RBP6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 CBX4O00257 560 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 MATN3O15232 486 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 DCXO43602 365 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 SKAP2O75563 359 aaPredicted RBP6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 CABYRO75952 493 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 USP1O94782 785 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 ANP32DO95626 131 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 EOMESO95936 686 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 IGHA2P01877 340 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 TYMPP19971 482 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 GLDCP23378 1020 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 SERPINB8P50452 374 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 AIF1P55008 147 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 OCRLQ01968 901 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 DSC1Q08554 894 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 PLD1Q13393 1074 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 PTPRRQ15256 657 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 BRMS1LQ5PSV4 323 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 RBM20Q5T481 1227 aaKnown RBP6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 GRTP1Q5TC63 336 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 STEAP4Q687X5 459 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 LHX8Q68G74 356 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 CNSTQ6PJW8 725 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 NAPRTQ6XQN6 538 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 ATG14Q6ZNE5 492 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 CCNJLQ8IV13 435 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 TRIM42Q8IWZ5 723 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 OR6K2Q8NGY2 324 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 CFAP61Q8NHU2 1237 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 PIWIL2Q8TC59 973 aaKnown RBP6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 RMDN1Q96DB5 314 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 IFT43Q96FT9 208 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 NUF2Q9BZD4 464 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 ZCWPW1Q9H0M4 648 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 EIF2B3Q9NR50 452 aaKnown RBP6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 TLR8Q9NR97 1041 aaKnown RBP6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 THAP1Q9NVV9 213 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 TMEM161AQ9NX61 479 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 PLK2Q9NYY3 685 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 SIRPGQ9P1W8 387 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 XPR1Q9UBH6 696 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 NKX1-2Q9UD57 310 aaPredicted RBP6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 DCDC2Q9UHG0 476 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 ATP11BQ9Y2G3 1177 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 SF3B1O75533 1304 aaKnown RBP eCLIP6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 ANKRD12Q6UB98 2062 aa6.13□□□□□ -1.43
TNFSF4-201ENST00000281834 GOLGA4Q13439 2230 aaKnown RBP6.12□□□□□ -1.43
TNFSF4-201ENST00000281834 FAM95CA0A1B0GW59 222 aa6.12□□□□□ -1.43
TNFSF4-201ENST00000281834 MOXD2PA6NHM9 499 aa6.12□□□□□ -1.43
TNFSF4-201ENST00000281834 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.12□□□□□ -1.43
TNFSF4-201ENST00000281834 TMEM233B4DJY2 109 aa6.12□□□□□ -1.43
TNFSF4-201ENST00000281834 ALDH1A2O94788 518 aa6.12□□□□□ -1.43
TNFSF4-201ENST00000281834 PRSS56P0CW18 603 aa6.12□□□□□ -1.43
TNFSF4-201ENST00000281834 FGF3P11487 239 aaPredicted RBP6.12□□□□□ -1.43
TNFSF4-201ENST00000281834 HNRNPLP14866 589 aaKnown RBP eCLIP6.12□□□□□ -1.43
TNFSF4-201ENST00000281834 GM2AP17900 193 aa6.12□□□□□ -1.43
TNFSF4-201ENST00000281834 MPSTP25325 297 aa6.12□□□□□ -1.43
TNFSF4-201ENST00000281834 GABRB3P28472 473 aa6.12□□□□□ -1.43
TNFSF4-201ENST00000281834 EPHA3P29320 983 aa6.12□□□□□ -1.43
TNFSF4-201ENST00000281834 PGM1P36871 562 aa6.12□□□□□ -1.43
TNFSF4-201ENST00000281834 SERPINB5P36952 375 aa6.12□□□□□ -1.43
TNFSF4-201ENST00000281834 SLC1A2P43004 574 aa6.12□□□□□ -1.43
TNFSF4-201ENST00000281834 SLC25A3Q00325 362 aa6.12□□□□□ -1.43
TNFSF4-201ENST00000281834 KPNB1Q14974 876 aaKnown RBP6.12□□□□□ -1.43
TNFSF4-201ENST00000281834 GEN1Q17RS7 908 aa6.12□□□□□ -1.43
TNFSF4-201ENST00000281834 MAP3K21Q5TCX8 1036 aa6.12□□□□□ -1.43
TNFSF4-201ENST00000281834 MBLAC2Q68D91 279 aa6.12□□□□□ -1.43
TNFSF4-201ENST00000281834 KCTD11Q693B1 232 aa6.12□□□□□ -1.43
TNFSF4-201ENST00000281834 TMEM135Q86UB9 458 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms