RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 KRT31Q15323 416 aa15.3■□□□□ 0.04
UPK3A-201ENST00000216211 CCDC14Q49A88 953 aa15.3■□□□□ 0.04
UPK3A-201ENST00000216211 CDKAL1Q5VV42 579 aa15.3■□□□□ 0.04
UPK3A-201ENST00000216211 SEL1L3Q68CR1 1132 aa15.3■□□□□ 0.04
UPK3A-201ENST00000216211 RETSATQ6NUM9 610 aa15.3■□□□□ 0.04
UPK3A-201ENST00000216211 PCDH20Q8N6Y1 951 aaKnown RBP15.3■□□□□ 0.04
UPK3A-201ENST00000216211 JOSD2Q8TAC2 188 aa15.3■□□□□ 0.04
UPK3A-201ENST00000216211 SLC30A5Q8TAD4 765 aa15.3■□□□□ 0.04
UPK3A-201ENST00000216211 ENOX1Q8TC92 643 aaKnown RBP15.3■□□□□ 0.04
UPK3A-201ENST00000216211 RXFP2Q8WXD0 754 aa15.3■□□□□ 0.04
UPK3A-201ENST00000216211 PPP1R16AQ96I34 528 aa15.3■□□□□ 0.04
UPK3A-201ENST00000216211 C11orf70Q9BRQ4 267 aa15.3■□□□□ 0.04
UPK3A-201ENST00000216211 CALN1Q9BXU9 219 aa15.3■□□□□ 0.04
UPK3A-201ENST00000216211 HDAC8Q9BY41 377 aa15.3■□□□□ 0.04
UPK3A-201ENST00000216211 CEP44Q9C0F1 390 aa15.3■□□□□ 0.04
UPK3A-201ENST00000216211 CAAP1Q9H8G2 361 aa15.3■□□□□ 0.04
UPK3A-201ENST00000216211 FAM207AQ9NSI2 230 aaPredicted RBP15.3■□□□□ 0.04
UPK3A-201ENST00000216211 NDFIP2Q9NV92 336 aa15.3■□□□□ 0.04
UPK3A-201ENST00000216211 PPARGC1AQ9UBK2 798 aaKnown RBP15.3■□□□□ 0.04
UPK3A-201ENST00000216211 ATRXP46100 2492 aa15.29■□□□□ 0.04
UPK3A-201ENST00000216211 KNTC1P50748 2209 aa15.29■□□□□ 0.04
UPK3A-201ENST00000216211 CD160O95971 181 aa15.29■□□□□ 0.04
UPK3A-201ENST00000216211 CKMT2P17540 419 aa15.29■□□□□ 0.04
UPK3A-201ENST00000216211 HNRNPA2B1P22626 353 aaKnown RBP15.29■□□□□ 0.04
UPK3A-201ENST00000216211 MMP8P22894 467 aa15.29■□□□□ 0.04
UPK3A-201ENST00000216211 SDC4P31431 198 aa15.29■□□□□ 0.04
UPK3A-201ENST00000216211 AKT2P31751 481 aa15.29■□□□□ 0.04
UPK3A-201ENST00000216211 SOX5P35711 763 aa15.29■□□□□ 0.04
UPK3A-201ENST00000216211 ACVRL1P37023 503 aa15.29■□□□□ 0.04
UPK3A-201ENST00000216211 NEK3P51956 506 aa15.29■□□□□ 0.04
UPK3A-201ENST00000216211 JAM2P57087 298 aa15.29■□□□□ 0.04
UPK3A-201ENST00000216211 CLDN2P57739 230 aa15.29■□□□□ 0.04
UPK3A-201ENST00000216211 CARD16Q5EG05 197 aa15.29■□□□□ 0.04
UPK3A-201ENST00000216211 HES3Q5TGS1 186 aa15.29■□□□□ 0.04
UPK3A-201ENST00000216211 RWDD4Q6NW29 188 aaKnown RBP15.29■□□□□ 0.04
UPK3A-201ENST00000216211 FBXL19Q6PCT2 694 aa15.29■□□□□ 0.04
UPK3A-201ENST00000216211 GCNT7Q6ZNI0 430 aa15.29■□□□□ 0.04
UPK3A-201ENST00000216211 PDZD3Q86UT5 571 aa15.29■□□□□ 0.04
UPK3A-201ENST00000216211 OR13H1Q8NG92 308 aa15.29■□□□□ 0.04
UPK3A-201ENST00000216211 HEPHQ9BQS7 1158 aa15.29■□□□□ 0.04
UPK3A-201ENST00000216211 MAGEB5Q9BZ81 275 aa15.29■□□□□ 0.04
UPK3A-201ENST00000216211 OR12D3Q9UGF7 316 aa15.29■□□□□ 0.04
UPK3A-201ENST00000216211 LOC400499M0QZD8 3231 aa15.29■□□□□ 0.04
UPK3A-201ENST00000216211 SMTNL1A8MU46 457 aa15.28■□□□□ 0.04
UPK3A-201ENST00000216211 FAM72CH0Y354 149 aa15.28■□□□□ 0.04
UPK3A-201ENST00000216211 GOLGA6L19H0YKK7 550 aa15.28■□□□□ 0.04
UPK3A-201ENST00000216211 TRIM38O00635 465 aa15.28■□□□□ 0.04
UPK3A-201ENST00000216211 SIGLEC6O43699 453 aa15.28■□□□□ 0.04
UPK3A-201ENST00000216211 TPM2P07951 284 aa15.28■□□□□ 0.04
UPK3A-201ENST00000216211 CDK4P11802 303 aa15.28■□□□□ 0.04
UPK3A-201ENST00000216211 ADRB3P13945 408 aa15.28■□□□□ 0.04
UPK3A-201ENST00000216211 DGKAP23743 735 aa15.28■□□□□ 0.04
UPK3A-201ENST00000216211 ADRA1BP35368 520 aa15.28■□□□□ 0.04
UPK3A-201ENST00000216211 CCNHP51946 323 aaPredicted RBP15.28■□□□□ 0.04
UPK3A-201ENST00000216211 SLC20A2Q08357 652 aa15.28■□□□□ 0.04
UPK3A-201ENST00000216211 TARDBPQ13148 414 aaKnown RBP eCLIP15.28■□□□□ 0.04
UPK3A-201ENST00000216211 MAPK8IP2Q13387 824 aaPredicted RBP15.28■□□□□ 0.04
UPK3A-201ENST00000216211 PROX2Q3B8N5 592 aa15.28■□□□□ 0.04
UPK3A-201ENST00000216211 ARL13BQ3SXY8 428 aa15.28■□□□□ 0.04
UPK3A-201ENST00000216211 TMEM259Q4ZIN3 620 aa15.28■□□□□ 0.04
UPK3A-201ENST00000216211 FKBP15Q5T1M5 1219 aa15.28■□□□□ 0.04
UPK3A-201ENST00000216211 FAM72AQ5TYM5 149 aa15.28■□□□□ 0.04
UPK3A-201ENST00000216211 MANEALQ5VSG8 457 aa15.28■□□□□ 0.04
UPK3A-201ENST00000216211 FAM72DQ6L9T8 149 aa15.28■□□□□ 0.04
UPK3A-201ENST00000216211 FAM72BQ86X60 149 aa15.28■□□□□ 0.04
UPK3A-201ENST00000216211 SLC25A45Q8N413 288 aa15.28■□□□□ 0.04
UPK3A-201ENST00000216211 TM6SF2Q9BZW4 377 aa15.28■□□□□ 0.04
UPK3A-201ENST00000216211 ZDHHC6Q9H6R6 413 aa15.28■□□□□ 0.04
UPK3A-201ENST00000216211 UCKL1Q9NWZ5 548 aa15.28■□□□□ 0.04
UPK3A-201ENST00000216211 DNAI1Q9UI46 699 aa15.28■□□□□ 0.04
UPK3A-201ENST00000216211 LRRK1Q38SD2 2015 aa15.27■□□□□ 0.04
UPK3A-201ENST00000216211 SMG1Q96Q15 3661 aaKnown RBP15.27■□□□□ 0.04
UPK3A-201ENST00000216211 IGSF10Q6WRI0 2623 aa15.27■□□□□ 0.04
UPK3A-201ENST00000216211 C2CD4BA6NLJ0 364 aa15.27■□□□□ 0.04
UPK3A-201ENST00000216211 ACP1P24666 158 aa15.27■□□□□ 0.04
UPK3A-201ENST00000216211 ITGB7P26010 798 aa15.27■□□□□ 0.04
UPK3A-201ENST00000216211 L1CAMP32004 1257 aa15.27■□□□□ 0.04
UPK3A-201ENST00000216211 GKP32189 559 aa15.27■□□□□ 0.04
UPK3A-201ENST00000216211 PTPN9P43378 593 aa15.27■□□□□ 0.04
UPK3A-201ENST00000216211 NRG1Q02297 640 aaPredicted RBP15.27■□□□□ 0.04
UPK3A-201ENST00000216211 PTP4A2Q12974 167 aa15.27■□□□□ 0.04
UPK3A-201ENST00000216211 COL9A2Q14055 689 aaPredicted RBP15.27■□□□□ 0.04
UPK3A-201ENST00000216211 FGL2Q14314 439 aa15.27■□□□□ 0.04
UPK3A-201ENST00000216211 SARM1Q6SZW1 724 aa15.27■□□□□ 0.04
UPK3A-201ENST00000216211 LEKR1Q6ZMV7 388 aa15.27■□□□□ 0.04
UPK3A-201ENST00000216211 PARS2Q7L3T8 475 aaKnown RBP15.27■□□□□ 0.04
UPK3A-201ENST00000216211 STRADAQ7RTN6 431 aa15.27■□□□□ 0.04
UPK3A-201ENST00000216211 NLRP14Q86W24 1093 aa15.27■□□□□ 0.04
UPK3A-201ENST00000216211 SLC22A18ASQ8N1D0 253 aa15.27■□□□□ 0.04
UPK3A-201ENST00000216211 CCDC185Q8N715 623 aa15.27■□□□□ 0.04
UPK3A-201ENST00000216211 OR6K2Q8NGY2 324 aa15.27■□□□□ 0.04
UPK3A-201ENST00000216211 FAM172AQ8WUF8 416 aa15.27■□□□□ 0.04
UPK3A-201ENST00000216211 ARHGEF2Q92974 986 aaKnown RBP15.27■□□□□ 0.04
UPK3A-201ENST00000216211 NXPE2Q96DL1 559 aa15.27■□□□□ 0.04
UPK3A-201ENST00000216211 LRIG1Q96JA1 1093 aa15.27■□□□□ 0.04
UPK3A-201ENST00000216211 PCDHB18PQ96TA0 734 aa15.27■□□□□ 0.04
UPK3A-201ENST00000216211 OSBPL2Q9H1P3 480 aa15.27■□□□□ 0.04
UPK3A-201ENST00000216211 SCUBE2Q9NQ36 999 aa15.27■□□□□ 0.04
UPK3A-201ENST00000216211 KLHL11Q9NVR0 708 aa15.27■□□□□ 0.04
UPK3A-201ENST00000216211 FANCLQ9NW38 375 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms