RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Rfx6Q8C7R7 927 aa21.52■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Aldh4a1Q8CHT0 562 aa21.52■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Rell1Q8K2J7 272 aa21.52■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Foxe1Q8R2I0 371 aa21.52■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Ttc39cQ8VE09 580 aa21.52■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Oas1dQ8VI95 361 aa21.52■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Gtf2ird2Q99NI3 936 aa21.52■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Acot13Q9CQR4 140 aa21.52■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Fam227bQ9D518 532 aa21.52■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Tmed2Q9R0Q3 201 aa21.52■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Zfp963D3Z2T8 383 aa21.52■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Gm4450E9Q007 373 aa21.52■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Zfp780bE9Q2S6 806 aa21.52■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Spin2fJ3QPU0 254 aa21.52■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Nfkb1P25799 971 aa21.52■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Zfp607aQ3TQG9 686 aa21.52■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Hsd3b4Q61767 373 aa21.52■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Lemd2Q6DVA0 511 aa21.52■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Sirt5Q8K2C6 310 aa21.52■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Pcdhb18Q91Y02 792 aa21.52■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Necab2Q91ZP9 389 aa21.52■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Pde6cQ91ZQ1 861 aa21.52■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Rin1Q921Q7 763 aa21.52■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Rmi1Q9D4G9 616 aa21.52■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Stap1Q9JM90 297 aaKnown RBP21.52■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Trpc4Q9QUQ5 974 aa21.52■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Olfr1049A2ARZ0 308 aa21.51■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 GmlE9PX31 176 aa21.51■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Gm7073E9QAS1 335 aa21.51■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Fpr-rs3O88537 343 aa21.51■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Olfm1O88998 485 aa21.51■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Myl4P09541 193 aaKnown RBP21.51■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Sbk3P0C5K0 361 aa21.51■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 PrkcgP63318 697 aa21.51■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 ItkQ03526 625 aa21.51■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Krt26Q3TRJ4 462 aa21.51■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Gm853Q3UNZ2 425 aa21.51■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 E330034G19RikQ3UWX6 351 aa21.51■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Runx3Q64131 409 aa21.51■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Nomo1Q6GQT9 1214 aaKnown RBP21.51■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Bfsp2Q6NVD9 416 aa21.51■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Mgat5bQ765H6 792 aa21.51■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Znf76Q8BMU0 568 aa21.51■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Ppp4r1Q8K2V1 951 aa21.51■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Mrps18aQ99N85 196 aa21.51■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Golga1Q9CW79 758 aa21.51■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Efhc2Q9D485 750 aa21.51■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Pgam1Q9DBJ1 254 aa21.51■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 NfkbizQ9EST8 728 aa21.51■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Gm29554A0A087WNW4 188 aa21.5■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Igkv16-104A0A0B4J1I1 116 aa21.5■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Sema3aO08665 772 aa21.5■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Casq2O09161 415 aa21.5■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 EomesO54839 707 aa21.5■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 AvilO88398 819 aa21.5■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 PdgfrbP05622 1098 aa21.5■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 IdsQ08890 552 aa21.5■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 PapolaQ61183 739 aa21.5■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Ssr4Q62186 172 aa21.5■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 CcncQ62447 283 aa21.5■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Olfr26Q7TRB7 308 aa21.5■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Rpp38Q80UU2 280 aa21.5■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Noc4lQ8BHY2 516 aa21.5■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Iffo1Q8BXL9 562 aa21.5■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Itpk1Q8BYN3 419 aa21.5■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 TdrpQ8C5P7 182 aa21.5■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Wnt9aQ8R5M2 365 aa21.5■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Olfr589Q8VGV8 317 aa21.5■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 FtcdQ91XD4 541 aa21.5■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Stk33Q924X7 491 aa21.5■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Rrp15Q9CYX7 281 aaKnown RBP21.5■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Q9D1F3 157 aa21.5■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Olfr933Q9EQA0 308 aa21.5■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Col4a4Q9QZR9 1682 aa21.5■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 RlfA2A7F4 1918 aa21.5■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Gm9774A0A0A6YVU8 407 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Ttc23lA6H6E9 458 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Gm16427J3QN52 483 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Il3P01586 166 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 P01670 111 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 P01671 111 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 P01672 111 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Hk1P17710 974 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 TshrP47750 764 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Tead2P48301 445 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Smpdl3bP58242 456 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Cct5P80316 541 aaKnown RBP21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Cd244Q07763 397 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Tax1bp1Q3UKC1 814 aaKnown RBP21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Zfp759Q7M6X3 721 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Smoc1Q8BLY1 463 aaKnown RBP21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Lrrc19Q8BZT5 364 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Zfp449Q8CB76 518 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Vmn1r18Q8R2C8 299 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Imp4Q8VHZ7 291 aaKnown RBP21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Pcdhb13Q91Y06 796 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Kbtbd12Q9D618 625 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Kdelc1Q9JHP7 502 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Sh2d4bA6X942 431 aa21.49■■□□□ 1.03
Ccdc88a-202ENSMUST00000109477 Tlx1P43345 332 aa21.49■■□□□ 1.03
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms