RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Rnf146Q9CZW6 359 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Htatip2Q9Z2G9 242 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Ighv11-1A0A075B5R6 117 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Gm13101A2ASJ0 481 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Exoc3l2D3YUP5 789 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Ccdc188F6WEU2 249 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Capn2O08529 700 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Tnfrsf11bO08712 401 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Aldh1a7O35945 501 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 CrymO54983 313 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Krt10P02535 570 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 GlulP15105 373 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Hspa4lP48722 838 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Kcnn2P58390 839 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Rin3P59729 980 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Bcl2a1cQ0P538 128 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Znf112Q0VAW7 879 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Pgap2Q3TQR0 254 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Eri2Q5BKS4 688 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 HnrnpdQ60668 355 aaKnown RBP10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Parp6Q6P6P7 630 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Cypt4Q6P925 153 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Hamp2Q80T19 83 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Fstl5Q8BFR2 847 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Slc43a1Q8BSM7 564 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Rspry1Q8BVR6 576 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Dennd1aQ8K382 1016 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 PtprfA2A8L5 1898 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Mmrn1B2RPV6 1210 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Kcna10B2RQA1 511 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Gm5930D3Z257 264 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Fbxl18E9PYR1 771 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Cyp4a14O35728 507 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Atp2a2O55143 1044 aaKnown RBP10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 DgkaO88673 730 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Cdh1P09803 884 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Pabpc1P29341 636 aaKnown RBP10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 KcpQ3U492 1550 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Naf1Q3UMQ8 489 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Afap1l2Q5DTU0 825 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 B3galnt2Q8BG28 504 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Cd207Q8VBX4 331 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 CoprsQ9CQ13 173 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 PrccQ9EQC8 491 aaKnown RBP10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Irx5Q9JKQ4 484 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Rps6kb2Q9Z1M4 485 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Sept3Q9Z1S5 350 aa10.09□□□□□ -0.79
Ccdc38-201ENSMUST00000092215 Gm6370A0A0G2JGX9 315 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Olfr1049A2ARZ0 308 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Gm13285B1AYI3 182 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Gm13275B1AYI8 182 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Gm6309L7N481 315 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 PigrO70570 771 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Alkbh5Q3TSG4 395 aaKnown RBP10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Taar7aQ5QD12 358 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 HiraQ61666 1015 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 IfnzQ8BQT1 182 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Ephb1Q8CBF3 984 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Gm13278Q8CD73 182 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 ClmpQ8R373 373 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Olfr784Q8VFZ9 319 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 KmoQ91WN4 479 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Pdxdc1Q99K01 787 aaKnown RBP10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Piezo2Q8CD54 2822 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Sh3pxd2bA2AAY5 908 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Patl2A2ARM1 529 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Lrriq4A6H6A4 596 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Morc3F7BJB9 942 aaKnown RBP10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Sstr1P30873 391 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Ptprn2P80560 1001 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 AurkaP97477 395 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 CamkmtQ3U2J5 323 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Armc7Q3UJZ3 198 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Ccdc114Q3UX62 658 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Itga1Q3V3R4 1179 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Gbp4Q61107 620 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Nlrp4eQ66X19 978 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Rftn1Q6A0D4 554 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Ints6Q6PCM2 883 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Olfr855Q7TRF8 312 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Bcas1Q80YN3 633 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Elp6Q8BK75 266 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Zfp62Q8C827 914 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Mat1aQ91X83 396 aaKnown RBP10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Mrps17Q9CQE3 120 aaKnown RBP10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Prpsap1Q9D0M1 356 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Pebp4Q9D9G2 242 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Cldn19Q9ET38 224 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Drg2Q9QXB9 364 aaKnown RBP10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Il17dA0A0B4J1G4 205 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Gm3854A0A1B0GSS6 495 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Fam171a1A2ATK9 892 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 JrklB2RRL2 523 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Cldn4O35054 210 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Xbp1O35426 267 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Grk4O70291 574 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Pias1O88907 651 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Tcf3P15806 651 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Elk3P41971 409 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Arf5P84084 180 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms