RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Lpar1P61793 364 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 CrtamQ149L7 389 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ak8Q32M07 479 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Mrgprx2Q3UG50 352 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Vmn2r26Q6TAC4 855 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Rad9bQ6WBX7 403 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Trim69Q80X56 500 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Mup21Q80YX8 181 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Vta1Q9CR26 309 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Rin2Q9D684 903 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Copg2Q9QXK3 871 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Adam17Q9Z0F8 827 aa12.08□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ice1E9Q286 2241 aaKnown RBP12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Slfn9B1ARD6 910 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Siah3B2RWG3 268 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ttc7bE9Q6P5 843 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 CremP27699 357 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Sstr1P30873 391 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Shroom1Q5SX79 823 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Cyp4b1Q64462 511 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Socs4Q91ZA6 436 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Spg21Q9CQC8 308 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Efcab1Q9D3N2 212 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Actrt1Q9D9J3 376 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Usp21Q9QZL6 566 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 1700031M16RikA0A087WSH0 82 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Rpl21O09167 160 aaKnown RBP12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Bnip2O54940 326 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Prdx3P20108 257 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Naa20P61600 178 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Pdss1Q33DR2 409 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ezh2Q61188 746 aaKnown RBP12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Klhl6Q6V595 619 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 NarfQ9CYQ7 462 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ropn1Q9ESG2 212 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Olfr564E9PWA8 316 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Gm3095E9Q058 166 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Cyp17a1P27786 507 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Dok6Q2MHE5 331 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Klhl5Q6PFE1 708 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 H2afb2S4R1M3 115 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Zc3h7aE9PWW6 970 aaKnown RBP12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Rpl3P27659 403 aaKnown RBP12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Scp2P32020 547 aaKnown RBP12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Cyp2j13Q3UNV4 503 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Dph1Q5NCQ5 438 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Colgalt2Q6NVG7 625 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Slc18a2Q8BRU6 517 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 VcpkmtQ8C436 228 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Mospd1Q8VEL0 213 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Fam187aQ9D3R5 417 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Wdr64Q9D565 1086 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ltb4r2Q9JJL9 360 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Cacna1cQ01815 2139 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 4930579F01RikE9Q3L6 325 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 JchainP01592 159 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Eif1adQ3THJ3 170 aaKnown RBP12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Eif2b4Q61749 524 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Il31raQ8K5B1 716 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Scd3Q99PL7 359 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 GarsQ9CZD3 729 aaKnown RBP12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 AdgbG3UZ78 1657 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Gm6337K7N6X9 211 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Gm3115L7N285 211 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Apba3O88888 571 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Fdft1P53798 416 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Susd6Q8BGE4 302 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Las2Q8CB14 526 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Cul9Q80TT8 1865 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ssxb9A2BI93 185 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Itih4A6X935 942 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ncam2O35136 837 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 PvalbP32848 110 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Hmgcs2P54869 508 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Rps12P63323 132 aaKnown RBP12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ugt1a2P70691 533 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ugt1a9Q62452 528 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ugt1a1Q63886 535 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Hist2h2abQ64522 130 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Pkn3Q8K045 878 aa12.07□□□□□ -0.48
Trim56-201ENSMUST00000054384 Spef2Q8C9J3 1734 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 2210011C24RikA0A087WQ89 206 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Frmd7A2AD83 703 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Lrrc73B2RWC4 316 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Lgals7O54974 136 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Pdha2P35487 391 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Gpr151Q7TSN6 422 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Asb2Q8K0L0 634 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Pitrm1Q8K411 1036 aaKnown RBP12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Mgat5Q8R4G6 740 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Sgms1Q8VCQ6 419 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Fam96aQ9DCL2 160 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Pcdh7A0A0A6YY83 1255 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Pramel3A2AHA7 463 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Gm7903A2AWL1 463 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Nipal1Q8BMW7 416 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 HlfQ8BW74 295 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Smco1Q8CEZ1 214 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Klrb1fQ8VD98 217 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 IqchQ9D2K4 1071 aa12.06□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 44.9 ms